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Establishment of the methodology for target identification of bioactive natural products based on the chemical genomics

Research Project

Project/Area Number 22659022
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Drug development chemistry
Research InstitutionOsaka University

Principal Investigator

ARAI Masayoshi  大阪大学, 大学院・薬学研究科, 准教授 (80311231)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,090,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2010: ¥1,400,000 (Direct Cost: ¥1,400,000)
Keywordsケミカルジェノミクス / ケミカルバイオロジー / 生物活性物質 / 標的分子 / ケミカルゲノミックス
Research Abstract

With the transformants of HeLa cells with cDNA library or the next-generation sequencer, we tried establishment of the general methodology to clarify the target molecules of the bioactive natural products that acts on the eukaryotes such as an animal cells. Using topoisomerase I inhibitor of camptothecin as a model compound, we succeeded in the establishment of the methods, which selects a camptothecin-resistant HeLa cell from the transformants of HeLa cells that over-expressed cDNA randomly, and analyzes the cDNA introduced from the camptothecin-resistant HeLa cell. We also succeeded in the preparation of spontaneous resistant HeLa cells against camptothecin for exhaustively analyzing genetic mutation using a next-generation sequencer.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (12 results)

All 2011 2010 Other

All Journal Article (5 results) (of which Peer Reviewed: 5 results) Presentation (4 results) Remarks (3 results)

  • [Journal Article] Action-mechanism of trichoderin A, an anti-dormant mycobacterial aminolipopeptide from marine sponge-derived Trichoderma sp2011

    • Author(s)
      Pruksakorn P., Arai M., Liu L., Moodley P., Jacobs Jr. W. R., Kobayashi M
    • Journal Title

      Biol. Pharm. Bull.

      Volume: 34(8) Pages: 1287-1290

    • NAID

      130000936600

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] DedA protein relates to action-mechanism of halicyclamine A, a marine spongean macrocyclic alkaloid, as an anti-dormant mycobacterial substance2011

    • Author(s)
      Arai M., Liu L., Fujimoto T., Setiawan A., Kobayashi M
    • Journal Title

      Marine Drugs

      Volume: 9(6) Pages: 984-993

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Action-Mechanism of Trichoderin A, an Anti-dormant Mycobacterial Aminolipopeptide from Marine Sponge-Derived Trichoderma sp.2011

    • Author(s)
      Patamapom Pruksakorn
    • Journal Title

      Biological and Pharmaceutical Bulletin

      Volume: 34 Issue: 8 Pages: 1287-1290

    • DOI

      10.1248/bpb.34.1287

    • NAID

      130000936600

    • ISSN
      0918-6158, 1347-5215
    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 海洋生物からの医薬シーズ探索2010

    • Author(s)
      荒井雅吉、小林資正
    • Journal Title

      有機合成化学協会誌

      Volume: 68巻 Pages: 470-479

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] 海洋生物からの医薬シーズの探索2010

    • Author(s)
      荒井雅吉、小林資正
    • Journal Title

      有機合成化学協会誌

      Volume: 68 Pages: 470-479

    • NAID

      10026868871

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] 抗潜在性結核物質halicyclamineAの作用メカニズム解析-ゲノムDNAライブラリーを利用する標的分子の解明-2011

    • Author(s)
      荒井雅吉、Liu Liu、藤本貴男、小林資正
    • Organizer
      第61回日本薬学会近畿支部総会・大会
    • Place of Presentation
      兵庫
    • Year and Date
      2011-10-22
    • Related Report
      2011 Final Research Report
  • [Presentation] 抗潜在性結核物質halicyclamine Aの作用メカニズム解析-ゲノムDNAライブラリーを利用する標的分子の解明-2011

    • Author(s)
      荒井雅吉
    • Organizer
      第61回日本薬学会近畿支部総会・大会
    • Place of Presentation
      神戸学院大学(兵庫)(招待講演)
    • Year and Date
      2011-10-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] 低酸素環境選択的がん細胞増殖阻害物質furospinosulin-1の作用メカニズム解析2011

    • Author(s)
      河内崇志、荒井雅吉、古徳直之、小林資正
    • Organizer
      日本薬学会第131年会
    • Place of Presentation
      静岡
    • Year and Date
      2011-03-29
    • Related Report
      2011 Final Research Report
  • [Presentation] 低酸素環境選択的がん細胞増殖阻害物質furospinosulin-1の作用メカニズム解析2011

    • Author(s)
      河内崇志、荒井雅吉、小林資正, ら
    • Organizer
      日本薬学会第131年会
    • Place of Presentation
      静岡(グランシップ静岡)
    • Year and Date
      2011-03-29
    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.phs.osaka-u.ac.jp/homepage/b012/

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.phs.osaka-u.ac.jp/homepage/b012/

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.phs.osaka-u.ac.jp/homepage/b012/

    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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