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Development of novel analytical methods of nucleotide sugars with the aim of monitoring tumor microenvironment

Research Project

Project/Area Number 22659067
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Pathological medical chemistry
Research InstitutionThe Institute of Physical and Chemical Research (2011)
Osaka University (2010)

Principal Investigator

NAKAJIMA Kazuki  独立行政法人理化学研究所, 糖鎖認識研究チーム, 基幹研究所研究員 (10442998)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,090,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2010: ¥1,400,000 (Direct Cost: ¥1,400,000)
Keywords糖ヌクレオチド / 単糖代謝 / 糖鎖 / 質量分析 / クロマトグラフィー / 癌 / 栄養飢餓
Research Abstract

We have developed two chromatographic methods for monitoring intracellular nucleotide sugars and their metabolic pathway, to clarify the physiological significance of nucleotide sugars in tumor microenvironments. We examined the changes of nucleotide sugars by glucose deprivation and hypoxic conditions in cancer cell lines, and found that specific reduction of UDP-GlcNAc and UDP-Gal in only pancreatic cancer cell lines influences cellular N-glycan structures.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (25 results)

All 2012 2011 2010 Other

All Journal Article (5 results) (of which Peer Reviewed: 5 results) Presentation (20 results)

  • [Journal Article] Integrated approach toward the discovery of glyco-biomarkers of inflammation-related diseases2012

    • Author(s)
      Angata T, Fujinawa R, Kurimoto A, Nakajima K, Kato M, Takamatsu S, Korekane H, Gao CX, Ohtsubo K, Kitazume S, and Taniguchi N
    • Journal Title

      Ann. N Y Acad. Sci

      Volume: 1 Pages: 159-169

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structural characterization of monosialo-, disialo-and trisialo-gangliosides by negative ion AP-MALDI-QIT-TOF mass spectrometry with MS(n) switching2012

    • Author(s)
      Ito E, Tominaga A, Waki H, Miseki K, Tomioka A, Nakajima K, Kakehi K, Suzuki M, Taniguchi N, and Suzuki A
    • Journal Title

      Neurochem Res

      Volume: 6 Pages: 1315-1324

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Hypoxic regulation of glycosylation via the N-acetylglucosamine cycle2011

    • Author(s)
      Shirato K, Nakajima K, Korekane H, Takamatsu S, Gao C, Angata T, Ohtsubo K, and Taniguchi N
    • Journal Title

      J. Clin. Biochem. Nutr

      Volume: 1 Pages: 20-25

    • NAID

      130004879225

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Hypoxic regulation of glycosylation via the N-acetylglucosamine cycle.2011

    • Author(s)
      Shirato, et al., (他7名)
    • Journal Title

      J Clin Biochem Nutr (Review)

      Volume: 1 Pages: 20-25

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Simultaneous determination of nucleotide sugars with ion-pair reversed-phase HPLC2010

    • Author(s)
      Nakajima K, Kitazume S, Angata T, Fujinawa R, Ohtsubo K, Miyoshi E, and Taniguchi N
    • Journal Title

      Glycobiology

      Volume: 7 Pages: 865-871

    • Related Report
      2011 Final Research Report 2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Tracing strategy of UDP-GlcNAc metabolism by mass isotopomers analysis-Specific sialic acid biosynthesis in pancreatic beta cells-2011

    • Author(s)
      Nakajima K, Shirato K, Ohtsubo K, Takamiya R, Kitazume S, Angata T, and Taniguchi N
    • Organizer
      GLYCO TOKYO 2011
    • Place of Presentation
      和光
    • Year and Date
      2011-12-09
    • Related Report
      2011 Final Research Report
  • [Presentation] Tracing Strategy of UDP-GlcNAc Metabolism by Mass Isotopomers Analysis-Specific Sialic Acid Biosynthesis in Pancreatic Beta Cells-2011

    • Author(s)
      中嶋和紀, ら(他6名)
    • Organizer
      GLYCO TOKYO 2011
    • Place of Presentation
      和光市、埼玉
    • Year and Date
      2011-12-09
    • Related Report
      2011 Annual Research Report
  • [Presentation] UDP-GlcNAc代謝物の新規解析戦略-糖代謝異常における糖ヌクレオチドの関与-2011

    • Author(s)
      中嶋和紀、白土健、大坪和明、高宮里奈、北爪しのぶ、安形高志、谷口直之
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都
    • Year and Date
      2011-09-23
    • Related Report
      2011 Final Research Report
  • [Presentation] UDP-GlcNAc代謝物の新規解析戦略-糖代謝異常における糖ヌクレオチドの関与-2011

    • Author(s)
      中嶋和紀, ら(他6名)
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都市
    • Year and Date
      2011-09-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] Novel strategy for dynamic tracing of UDP-GlcNAc metabolism2011

    • Author(s)
      Nakajima K, Shirato K, Ohtsubo K, Takamiya R, Kitazume S, Angata T, and Taniguchi N
    • Organizer
      The 31st NAITO CONFERENCE on Glycan Expression and Regulation[II]
    • Place of Presentation
      札幌
    • Year and Date
      2011-09-14
    • Related Report
      2011 Final Research Report
  • [Presentation] Novel strategy for dynamic tracing of UDP-GlcNAc metabolism2011

    • Author(s)
      Nakajima, et al.(他6名)
    • Organizer
      The 31^<st> NAITO CONFERENCE on Glycan Expression and Regulation [II]
    • Place of Presentation
      札幌
    • Year and Date
      2011-09-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Strategy for dynamic tracing of UDP-GlcNAc metabolism2011

    • Author(s)
      Nakajima K, Shirato K, Ohtsubo K, Takamiya R, Kitazume S, Angata T, and Taniguchi N
    • Organizer
      HUPO2011
    • Place of Presentation
      Geneva
    • Year and Date
      2011-09-05
    • Related Report
      2011 Final Research Report
  • [Presentation] Strategy for dynamic tracing of UDP-GlcNAc metabolism2011

    • Author(s)
      Nakajima, et al.(他6名)
    • Organizer
      HUPO2011
    • Place of Presentation
      Geneva, Sweitzerland
    • Year and Date
      2011-09-05
    • Related Report
      2011 Annual Research Report
  • [Presentation] Hypoxia reducedυ1, 6-GlcNAc branching N-glycans via GlcNAc Cycle2010

    • Author(s)
      Shirato K, Nakajima K, Korekane H, Gao CX, Takamiya R, Takamatsu S, Angata T, Ohtsubo K, and Taniguchi N
    • Organizer
      BMB2010
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-09
    • Related Report
      2011 Final Research Report
  • [Presentation] 糖ヌクレオチド代謝物の新規解析法2010

    • Author(s)
      中嶋和紀、大坪和明、高宮里奈、白土健、北爪しのぶ、三善英知、谷口直之
    • Organizer
      BMB2010
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-08
    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Presentation] Novel Analytical Methods for nucleotide sugar metabolites2010

    • Author(s)
      Nakajima, et al., (他6名)
    • Organizer
      2010 RIKEN Chemical Biology International Symposium
    • Place of Presentation
      Saitama
    • Year and Date
      2010-10-26
    • Related Report
      2010 Annual Research Report
  • [Presentation] Structural characterization ofυ-eliminated O-Glycans by high-sensitive CE-MS2010

    • Author(s)
      Ito E, Nakajima K, Kakehi K, Suzuki M, Kitazume S, and Taniguchi N
    • Organizer
      GlycoT 2010 Tokyo 7th International Symposium on Glycosyltransferase
    • Place of Presentation
      Tokyo
    • Year and Date
      2010-07-31
    • Related Report
      2011 Final Research Report
  • [Presentation] Novel analytical methods for nucleotide sugar metabolites2010

    • Author(s)
      Nakajima K, Ohtsubo K, Takamiya R, Shirato K, Kitazume S, Angata T, and Taniguchi N
    • Organizer
      GlycoT 2010 Tokyo 7th International Symposium on Glycosyltransferase
    • Place of Presentation
      Tokyo
    • Year and Date
      2010-07-31
    • Related Report
      2011 Final Research Report
  • [Presentation] Novel Analytical Methods for nucleotide sugar metabolites2010

    • Author(s)
      Nakajima, et al., (他6名)
    • Organizer
      GlycoT 2010 Tokyo 7th International Symposium on Glycosyltransferase
    • Place of Presentation
      Tokyo
    • Year and Date
      2010-07-31
    • Related Report
      2010 Annual Research Report
  • [Presentation] 糖ヌクレオチド代謝物の新規解析法2010

    • Author(s)
      中嶋和紀、大坪和明、高宮里奈、白土健、北爪しのぶ、三善英知、谷口直之
    • Organizer
      第1回日本プロテオーム学会年会
    • Place of Presentation
      千葉
    • Year and Date
      2010-07-27
    • Related Report
      2011 Final Research Report
  • [Presentation] 糖ヌクレオチド代謝物の新規解析法2010

    • Author(s)
      中嶋和紀, 他6名
    • Organizer
      日本プロテオーム機構第8回大会第6回日本臨床プロテオーム研究会連合大会
    • Place of Presentation
      千葉
    • Year and Date
      2010-07-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] Simultaneous analysis of nucleotide sugars with ion-pair reverse-phase HPLC and LC-MS on glycan cycle2010

    • Author(s)
      Nakajima K, Kitazume S, Angata T, Fujinawa R, Ohtsubo K, Miyoshi E, and Taniguchi N
    • Organizer
      International Symposium on Organelle Network : Interface among Infection-immunity, Cell biology and Glycobiology
    • Place of Presentation
      Osaka
    • Year and Date
      2010-04-13
    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Presentation] Novel analytical methods for nucleotide sugar metabolites

    • Author(s)
      Nakajima K, Ohtsubo K, Takamiya R, Shirato K, Kitazume S, Angata T, and Taniguchi N
    • Organizer
      RIKEN Chemical Biology International Symposium
    • Place of Presentation
      Saitama, Japan
    • Related Report
      2011 Final Research Report
  • [Presentation] Cigarette smoke extract induces bisecting GlcNAc modification in RAW264.7 murine mactrophage

    • Author(s)
      Takamiya R, Ohtsubo K, Takamatsu S, Nakajima K, Shirato K, Taniguchi N, and Angata T
    • Related Report
      2011 Final Research Report
  • [Presentation] Hypoxia reducedβ1, 6-GlcNAc branching N-glycans via GlcNAc Cycle

    • Author(s)
      Shirato K, Nakajima K, Korekane H, Gao CX, Takamiya R, Takamatsu S, Angata T, Ohtsubo K, and Taniguchi N
    • Related Report
      2011 Final Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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