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Population genomics of reinforcement and speciation in ninespine sticklebacks

Research Project

Project/Area Number 22687006
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Biodiversity/Systematics
Research InstitutionNational Fisheries University

Principal Investigator

TAKAHASHI Hiroshi  独立行政法人水産大学校, 生物生産学科, 助教 (90399650)

Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥23,400,000 (Direct Cost: ¥18,000,000、Indirect Cost: ¥5,400,000)
Fiscal Year 2012: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2011: ¥7,930,000 (Direct Cost: ¥6,100,000、Indirect Cost: ¥1,830,000)
Fiscal Year 2010: ¥9,880,000 (Direct Cost: ¥7,600,000、Indirect Cost: ¥2,280,000)
Keywords種分化 / トミヨ属 / 集団ゲノム学
Research Abstract

To examine the role of reinforcement in ninespine sticklebacks speciation, this project was going to adopt the population genomics approach using the AFLP markers. A QTL analysis was carried out with 15 lines BC1 from the cross of sympatric populations differing in nest shape putatively important in female conspecific recognition. 236 AFLP markers were placed into 21 linkage groups spanning 1885 cM with an average marker distance of 8.0 cM. Although highly significant QTL was observed in one of two behavioral components by which the difference in nest shape arise, significant QTL for the remaining more important component was not observed.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (27 results)

All 2013 2012 2011 2010 Other

All Journal Article (8 results) (of which Peer Reviewed: 4 results) Presentation (15 results) Book (2 results) Remarks (2 results)

  • [Journal Article] Sub-functionalization of duplicated genes in the evolution of nine-spined stickleback hatching enzyme2013

    • Author(s)
      Kawaguchi M, Takahashi H, Takehana Y, Naruse K, Nishida M, Yasumasu S.
    • Journal Title

      J. Exp. Zool. B: Mol. Dev. Evol.

      Volume: 320 Pages: 140-150

    • Related Report
      2012 Final Research Report
  • [Journal Article] Sub-functionalization of duplicated genes in the evolution of nine-spined stickleback hatching enzyme2013

    • Author(s)
      Mari Kawaguchi
    • Journal Title

      Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

      Volume: 320 Issue: 3 Pages: 140-150

    • DOI

      10.1002/jez.b.22490

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Speciation in ninespine stickleback : reproductive isolation and phenotypic divergence among cryptic species of Japanese nine stickleback.2013

    • Author(s)
      Ishikawa A, Takeuchi N, Kusakabe M, Kume M, Mori S, Takahashi H, Kitano J.
    • Journal Title

      Journal of Evolutionary Biology

      Volume: (In press) Issue: 7 Pages: 1417-1430

    • DOI

      10.1111/jeb.12146

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Introgression of Oncorhynchus masou subsp. (Biwa salmon) genome into lake-run O. m. ishikawae (Amago salmon) introduced into Lake Biwa2012

    • Author(s)
      Kuwahara M, Takahashi H, Kikko T, Kurumi S, Iguchi K.
    • Journal Title

      Japan. Ichthol. Res.

      Volume: 59 Pages: 195-201

    • Related Report
      2012 Final Research Report
  • [Journal Article] Introgression of Oncorhynchus masou subsp. (Biwa salmon) genome into lake-run O.m.ishikawae (Amago salmon) introduced into Lake Biwa, Japan2012

    • Author(s)
      Kuwahara, M., H.Takahashi, T.Kikko, S.Kurumi, K.Iguchi
    • Journal Title

      Ichthyological Research

      Volume: 59(印刷中) Issue: 3 Pages: 195-201

    • DOI

      10.1007/s10228-011-0270-y

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] GEDIMAP: a database of genetic diversity for Japanese freshwater fishes2010

    • Author(s)
      Watanabe K, Kano Y, Takahashi H, Mukai T, Kakioka R, Tominaga H.
    • Journal Title

      Ichthyol. Res.

      Volume: 57 Pages: 107-109

    • NAID

      10027374042

    • Related Report
      2012 Final Research Report
  • [Journal Article] Trophic relationship between red-spotted masu salmonand introduced rainbow trout in a Kyushu stream, southern Japan. Proc Int Symp Formosa landlocked salmon and masu salmon2010

    • Author(s)
      Sakano H, Iguchi K, Takahashi H, Sakai H
    • Journal Title

      J Natn Taiwan Mus

      Volume: 14 Pages: 139-147

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Speciation in ninespine stickleback: reproductive isolation and phenotypic divergence among cryptic species of Japanese ninespine stickleback

    • Author(s)
      Ishikawa A, Takeuchi N, Kusakabe M, Kume M, Mori S, Takahashi H, Kitano J.
    • Journal Title

      J. Evol. Biol. Online First

    • Related Report
      2012 Final Research Report
  • [Presentation] アムダリアデルタのアラルトミヨ Pungitius platygaster aralensisの遺伝的特徴2012

    • Author(s)
      高橋洋・Ramatulla T.
    • Organizer
      日本魚類学会年会
    • Place of Presentation
      水産大学校キャンパス
    • Related Report
      2012 Final Research Report
  • [Presentation] 半遊泳性カジカ類の適応放散と種分化:コットコメフォルス属2012

    • Author(s)
      高橋洋
    • Organizer
      日本魚類学会年会シンポジウム,バイカル湖におけるカジカ類の起源,適応放散と種分化
    • Place of Presentation
      水産大学校キャンパス
    • Related Report
      2012 Final Research Report
  • [Presentation] トミヨ孵化酵素LCEの卵膜分解における機能分化2012

    • Author(s)
      川口眞理・高橋洋・西田睦・安増茂樹
    • Organizer
      第14回日本進化学会
    • Place of Presentation
      首都大学東京南大沢キャンパス
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] Sub-functionalization of duplicated genes during evolution.2012

    • Author(s)
      Kawaguchi M, Takahashi H, Yasumasu S.
    • Organizer
      Seventh International Conference on Sctickleback Behaviour and Evolution
    • Place of Presentation
      Islandwood on Bainbridge Island, Seattle, Washington
    • Related Report
      2012 Final Research Report
  • [Presentation] Sub-functionalization of duplicated genes during evolution2012

    • Author(s)
      Mari Kawaguchi
    • Organizer
      Seventh International Conference on Sctickleback Behaviour and Evolution
    • Place of Presentation
      Seattle, Washington
    • Related Report
      2012 Annual Research Report
  • [Presentation] トゲウオ類における孵化酵素の遺伝子重複による機能分化2012

    • Author(s)
      川口眞理
    • Organizer
      日本動物学会第83大会
    • Place of Presentation
      大阪大学豊中キャンパス
    • Related Report
      2012 Annual Research Report
  • [Presentation] アムダリアデルタのアラルトミヨPungitius platygaster aralensisの遺伝的特徴2012

    • Author(s)
      高橋 洋
    • Organizer
      日本魚類学会年会
    • Place of Presentation
      水産大学校
    • Related Report
      2012 Annual Research Report
  • [Presentation] 半遊泳性カジカ類の適応放散と種分化:コットコメフォルス属2012

    • Author(s)
      高橋 洋
    • Organizer
      日本魚類学会年会シンポジウム
    • Place of Presentation
      水産大学校
    • Related Report
      2012 Annual Research Report
  • [Presentation] 同所的トミヨ属2種の巣作り行動の遺伝様式2011

    • Author(s)
      高橋洋
    • Organizer
      日本魚類学会年会
    • Place of Presentation
      弘前大学文京町キャンパス
    • Related Report
      2012 Final Research Report 2011 Annual Research Report
  • [Presentation] Biological Assessment in Area Capability Project - Plan of the specimen collection and DNA analysis2011

    • Author(s)
      Hiroshi Takahashi
    • Organizer
      Internationl Workshop on Area Capability Approach in the Philippines
    • Place of Presentation
      GCEP Building, University of the Philippines Visayas (UPV)
    • Related Report
      2012 Final Research Report
  • [Presentation] 周瀬戸内海地域を中心とした西日本における淡水魚類の比較系統地理2011

    • Author(s)
      田畑諒一・富永浩史・柿岡諒・小宮竹史・向井貴彦・高橋洋・張廖年鴻・渡辺勝敏
    • Organizer
      第58回日本生態学会全国大会
    • Place of Presentation
      札幌コンベンションセンター
    • Related Report
      2010 Annual Research Report
  • [Presentation] AFLP法およびmtDNA塩基配列解析によるサバフグ属7種の属内系統関係2010

    • Author(s)
      三好博之・高橋洋・酒井治己・土井啓行・望岡典隆・小早川みどり・佐藤繁・佐藤崇・松浦啓一
    • Organizer
      2010年度日本魚類学会年会
    • Place of Presentation
      三重県文化会館
    • Related Report
      2010 Annual Research Report
  • [Presentation] 湖内にすむビワマスはなぜアマゴから遺伝子浸透を受けていないのか?2010

    • Author(s)
      桑原雅之・井口恵一朗・高橋洋・亀甲武志・来見誠二
    • Organizer
      2010年度日本魚類学会年会
    • Place of Presentation
      三重県文化会館
    • Related Report
      2010 Annual Research Report
  • [Presentation] mtDNAおよびAFLPマーカーに基づくオヤニラミの系統地理分析2010

    • Author(s)
      高橋洋・杉田智彰・渡辺勝敏
    • Organizer
      2010年度日本魚類学会年会
    • Place of Presentation
      三重県文化会館
    • Related Report
      2010 Annual Research Report
  • [Presentation] AFLP法およびmtDNA塩基配列解析によるイシガキフグ属魚類種間雑種の遺伝分析2010

    • Author(s)
      土井啓行・玉井健太・善家裕太朗・高橋洋・酒井治己・石橋敏章
    • Organizer
      2010年度日本魚類学会年会
    • Place of Presentation
      三重県文化会館
    • Related Report
      2010 Annual Research Report
  • [Book] 鳥取県生活環境部公園自然課(イトヨ・オヤニラミ.鳥取県生物学会(編))2012

    • Author(s)
      高橋洋
    • Total Pages
      76
    • Publisher
      レッドデータブックとっとり改訂版-鳥取県の絶滅のおそれのある野生動植物-
    • Related Report
      2012 Final Research Report
  • [Book] 日本の淡水魚類相とその成立過程のより深い理解に向けて(淡水魚類地理の自然史【多様性と分化をめぐって】)2010

    • Author(s)
      渡辺勝敏・高橋洋
    • Total Pages
      283
    • Publisher
      北海道大学出版会(渡辺勝敏・高橋洋(編・著))
    • Related Report
      2012 Final Research Report
  • [Remarks] 市立しものせき水族館(海響館)において研究成果の一部を父の日に合わせて一般向けに特別展示した。

    • URL

      http://www.kaikyokan.com/blog-event/post-277.php

    • Related Report
      2012 Final Research Report
  • [Remarks] 水産大学校教員研究情報データベース

    • URL

      http://perch.fish-u.ac.jp/kensaku.php?mode=detail&code=4017&scode=00&check[0]=04&check[1]=04&fg=ch&page=1&1368520664

    • Related Report
      2012 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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