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Comprehensive analyses of DNA Topoisomerase I and relating DNA repair

Research Project

Project/Area Number 22710061
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Risk sciences of radiation/Chemicals
Research InstitutionNational Institute of Health Sciences

Principal Investigator

HORIBATA Katsuyoshi  国立医薬品食品衛生研究所, 変異遺伝部, 主任研究官 (40402995)

Research Collaborator HONMA Masamitsu  国立医薬品食品衛生研究所, 変異遺伝部, 室長 (30250179)
Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2011: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2010: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords修復 / ゲノム / プロテオーム / DNA修復 / 突然変異 / 放射線
Research Abstract

DNA topoisomerase I(Top1) is an essential enzyme involved in resolving the torsional stress associated with DNA replication and transcription. Top1 have a deleterious effect on cells in these processes. In the event, when the final re-ligation step of the reaction cycle is prevented, the covalent topoisomerase I. DNA intermediate becomes a toxic DNA lesion, called topoisomerase I-DNA covalent complex(Top1-cc). These lesions must be repaired. The molecular mechanisms of repair of Top1-cc seem to be complicated with DNA replication, transcription, recombination and protein degradation. However, detailed mechanisms are not clear. Here we purified and analyzed Top1 protein complexes to know molecular mechanisms of repair of Top1-cc, Top1 itself and interaction proteins.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (46 results)

All 2012 2011 2010

All Journal Article (10 results) (of which Peer Reviewed: 10 results) Presentation (36 results)

  • [Journal Article] these authors contributed equally to this work. Mutations in UVSSA cause UV-sensitive syndrome and destabilize ERCC6 in transcription-coupled DNA repair2012

    • Author(s)
      Xue Zhang, Katsuyoshi Horibata, Masafumi Saijo, Chie Ishigami, Akiko Ukai, Shin-ichiro Kanno, Hidetoshi Tahara, Edward G Neilan, Masamitsu Honma, Takehiko Nohmi, Akira Yasui and Kiyoji Tanaka
    • Journal Title

      Nature Genetics

      Volume: 44(5) Pages: 593-597

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] The conserved Cockayne syndrome B-piggyBac fusion protein(CSB-PGBD3) affects DNA repair and induces both interferon-like and innate antiviral responses in CSB-null cells2012

    • Author(s)
      Arnold D. Bailey, Lucas T. Gray, Thomas Pavelitz, John C. Newman, Katsuyoshi Horibata, Kiyoji Tanaka and Alan M. Weiner
    • Journal Title

      DNA repair

      Volume: 11(5) Pages: 488-501

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mutations in UVSSA cause UV-sensitive syndrome and destabilize ERCC6 in transcription-coupled DNA repair2012

    • Author(s)
      X. Zhang
    • Journal Title

      Nat.Genet

      Volume: 44 Issue: 5 Pages: 593-597

    • DOI

      10.1038/ng.2228

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The conserved Cockayne syndrome B-piggyBac fusion protein (CSB-PGBD3) affects DNA repair and induces both interferon-like and innate antiviral responses in CSB-null cells2012

    • Author(s)
      Bailey, A.D., et.al.
    • Journal Title

      DNA Repair

      Volume: 11(5) Pages: 488-501

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Further development of the rat Pig-a mutation assay : measuring rat Pig-a mutant bone marrow erythroids and a high throughput assay for mutant peripheral blood reticulocytes2012

    • Author(s)
      Kimoto, T., et.al.
    • Journal Title

      Environmental and Molecular Mutagenesis

      Volume: 52 Pages: 774-783

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Further Development of the Rat Pig-a Mutation Assay : Measuring Rat Pig-a Mutant Bone Marrow Erythroids and a High Throughput Assay for Mutant Peripheral Blood Reticulocytes2011

    • Author(s)
      Takafumi Kimoto, Satsuki Chikura, Kumiko Suzuki, Xiao mei Kobayashi, Yasuhiro Itano, Katsuyoshi Horibata, Masamitsu Honma, Vasily N. Dobrovolsky, Robert H. Heflich, Daishiro Miura and Yoshinori Kasahara
    • Journal Title

      Environmental and Molecular Mutagenesis

      Volume: 52 Pages: 774-783

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Fullerene(C60) is negative in the in vivo Pig-A gene mutation assay2011

    • Author(s)
      Katsuyoshi Horibata, Akiko Ukai, Naoki Koyama, Atsuya Takagi, Jun Kanno, Takafumi Kimoto, Daishiro Miura, Akihiko Hirose, and Masamitsu Honma
    • Journal Title

      Genes and Environment

      Volume: 33(1) Pages: 27-31

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mutant Cockayne syndrome group B protein inhibits repair of DNA topoisomerase I-DNA covalent complex2011

    • Author(s)
      Katsuyoshi Horibata, Masafumi Saijo, Mui Nee Bay, Li Lan, Isao Kuraoka, Philip J. Brooks, Masamitsu Honma, Takehiko Nohmi, Akira Yasui and Kiyoji Tanaka
    • Journal Title

      Genes to Cells

      Volume: 16(1) Pages: 101-14

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mutant Cockayne syndrome group B protein inhibits repair of DNA topoisomerase I-DNA covalent complex2011

    • Author(s)
      Horibata, K., et al.
    • Journal Title

      Genes to Cells

      Volume: 16 Pages: 101-114

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fullerene (C60) is negative in the in vivo Pig-A gene mutation assay2011

    • Author(s)
      Horibata, K., et al.
    • Journal Title

      Genes and Environment

      Volume: 33 Pages: 27-31

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Evaluation of in vivo genotoxicity induced by N-ethyl-N-nitrosourea, benzo[a] pyrene and 4-nitroquinoline-1-oxide by Pig-a and gpt assays2012

    • Author(s)
      Katsuyoshi Horibata, Akiko Ukai, Takafumi Kimoto, Tetsuya Suzuki, Nagisa Kamoshita, Kenichi Masumura, Takehiko Nohmi and Masamitsu Honma
    • Organizer
      Society of Toxicology 51st Annual Meeting
    • Place of Presentation
      San Francisco
    • Year and Date
      2012-03-15
    • Related Report
      2011 Final Research Report
  • [Presentation] Evaluation of in vivo genotoxicity induced by N-ethyl-N-nitrosourea, benzo[a]pyrene and 4-nitroquinoline-1-oxide by Pig-a and gpt assays2012

    • Author(s)
      Horibata, K., et.al.
    • Organizer
      Society of Toxicology 51st Annual Meeting
    • Place of Presentation
      サンフランシスコ
    • Year and Date
      2012-03-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] glycidolと3-MCPD及びこれらのエステル化合物におけるラット28日間反復投与試験の影響について2012

    • Author(s)
      大波冴子,曹永晩,豊田武士,堀端克良,本間正充,能美健彦,西川秋佳,小川久美子
    • Organizer
      第28回日本毒性病理学会総会
    • Year and Date
      2012-02-03
    • Related Report
      2011 Final Research Report
  • [Presentation] glycidolと3-MCPD及びこれらのエステル化合物におけるラット28日間反復投与試験の影響について2012

    • Author(s)
      大波冴子, et.al.
    • Organizer
      第28回日本毒性病理学会総会
    • Place of Presentation
      東京
    • Year and Date
      2012-02-03
    • Related Report
      2011 Annual Research Report
  • [Presentation] Molecular cloning of the gene for UV-sensitive syndrome with deficiencies in transcription-coupled DNA repair2011

    • Author(s)
      Xue Zhang, Katsuyoshi Horibata, Masafumi Saijo, Chie Ishigami, Akiko Ukai, Shinichiro Kanno, Edward. G Neilan, Hidetoshi Tahara, Masamitsu Honma, Takehiko Nohmi, Akira Yasui and Kiyoji Tanaka
    • Organizer
      第34回日本分子生物学会年会
    • Year and Date
      2011-12-15
    • Related Report
      2011 Final Research Report
  • [Presentation] UVSSA and USP7 cooperate to stabilize CSB in transcription-coupled DNA repair2011

    • Author(s)
      Masafumi Saijo, Xue Zhang, Katsuyoshi Horibata, Chie Ishigami, Akiko Ukai, Shin-ichiro Kanno, Hidetoshi Tahara, Edward G. Neilan, Masamitsu Honma, Takehiko Nohmi, Akira Yasui and Kiyoji Tanaka
    • Organizer
      第34回日本分子生物学会年会
    • Year and Date
      2011-12-15
    • Related Report
      2011 Final Research Report
  • [Presentation] Molecular cloning of the gene for UV-sensitive syndrome with deficiencies in transcription-coupled DNA repair2011

    • Author(s)
      Zhang, X., et.al.
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] UVSSA and USP7 cooperate to stabilize CSB in transcription-coupled DNA repair2011

    • Author(s)
      Saijo, M., et.al.
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] Pig-aアッセイとトランスジェニック突然変異試験の組合せに関する研究2011

    • Author(s)
      堀端克良,鵜飼明子,木本崇文,鈴木哲矢,鴨下渚,能美健彦,本間正充
    • Organizer
      日本環境変異原学会第40回大会
    • Year and Date
      2011-11-22
    • Related Report
      2011 Final Research Report
  • [Presentation] Pig-aアッセイとトランスジェニック突然変異試験の組合せに関する研究2011

    • Author(s)
      堀端克良, et.al.
    • Organizer
      日本環境変異原学会第40回大会
    • Place of Presentation
      東京
    • Year and Date
      2011-11-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] ラット末梢血を用いるPig-aアッセイ共同研究:測定技術の共有化と施設間差に関する研究報告2011

    • Author(s)
      木本崇文,堀端克良,武藤重治,真田尚和,橋本和之,伊東悟,宇野芳文,本間正充
    • Organizer
      日本環境変異原学会第40回大会
    • Year and Date
      2011-11-21
    • Related Report
      2011 Final Research Report
  • [Presentation] ラット末梢血を用いるPig-aアッセイ共同研究:測定技術の共有化と施設間差に関する研究報告2011

    • Author(s)
      木本崇文, et.al.
    • Organizer
      日本環境変異原学会第40回大会
    • Place of Presentation
      東京
    • Year and Date
      2011-11-21
    • Related Report
      2011 Annual Research Report
  • [Presentation] In Vitro Genotoxicity Tests Using Primary Hepatocytes2011

    • Author(s)
      Katsuyoshi Horibata, Akiko Ukai, Kenichi Masumura, Takehiko Nohmi and Masamitsu Honma
    • Organizer
      Environmental Mutagen Society 42nd Annual Meeting
    • Place of Presentation
      Montreal
    • Year and Date
      2011-10-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Further Development of the Rat Pig-a Mutation assay : Measuring Rat Pig-a Mutant Bone Marrow Erythroids and a High Throughput Assay for Mutant Peripheral Blood Reticulocytes2011

    • Author(s)
      Takafumi Kimoto, Satsuki Chikura, Kumiko Suzuki, Xiao mei Kobayashi, Yasuhiro Itano, Katsuyoshi Horibata, Masamitsu Honma, Vasily N. Dobrovolsky, Robert H. Heflich, Daishiro Miura and Yoshinori Kasahara
    • Organizer
      Environmental Mutagen Society 42nd Annual Meeting
    • Place of Presentation
      Montreal
    • Year and Date
      2011-10-17
    • Related Report
      2011 Final Research Report
  • [Presentation] In Vitro Genotoxicity Tests Using Primary Hepatocytes2011

    • Author(s)
      Horibata, K., et.al.
    • Organizer
      Environmental Mutagen Society 42nd Annual Meeting
    • Place of Presentation
      モントリオール
    • Year and Date
      2011-10-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Further Development of the Rat Pig-a Mutation assay : Measuring Rat Pig-a Mutant Bone Marrow Erythroids and a High Throughput Assay for Mutant Peripheral Blood Reticulocytes2011

    • Author(s)
      Kimoto, T., et.al.
    • Organizer
      Environmental Mutagen Society 42nd Annual Meeting
    • Place of Presentation
      モントリオール
    • Year and Date
      2011-10-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] A Japanese Collaborative Study on Rat Pig-a Assay ; Report on a Transferability of the Assay Method and Interlaboratory Difference2011

    • Author(s)
      Takafumi Kimoto, Katsuyoshi Horibata, Shigeharu Muto, Hisakazu Sanada, Kazuyuki Hashimoto, Satoru Itoh, Yoshifumi Uno and Masamitsu Honma
    • Organizer
      Environmental Mutagen Society 42nd Annual Meeting
    • Place of Presentation
      Montreal
    • Year and Date
      2011-10-16
    • Related Report
      2011 Final Research Report
  • [Presentation] A Japanese Collaborative Study on Rat Pig-a Assay ; Report on a Transferability of the Assay Method and Interlaboratory Difference2011

    • Author(s)
      Kimoto, T., et.al.
    • Organizer
      Environmental Mutagen Society 42nd Annual Meeting
    • Place of Presentation
      モントリオール
    • Year and Date
      2011-10-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] In vitro genotoxicity assay using primary hepatocytes derived from gpt delta transgenic mouse2011

    • Author(s)
      堀端克良,増村健一,能美健彦,本間正充
    • Organizer
      第70回日本癌学会学術総会
    • Year and Date
      2011-10-05
    • Related Report
      2011 Final Research Report
  • [Presentation] Evaluation of in vivo genotoxicity of glycidol and 3-MCPD and associated esters, using Pig-A and micronucleus assays2011

    • Author(s)
      大波冴子,曹永晩,豊田武士,堀端克良,本間正充,能美健彦,西川秋佳,小川久美子
    • Organizer
      第70回日本癌学会学術総会
    • Year and Date
      2011-10-05
    • Related Report
      2011 Final Research Report
  • [Presentation] In vitro genotoxicity assay using primary hepatocytes derived from gpt delta transgenic mouse2011

    • Author(s)
      堀端克良, et.al.
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋
    • Year and Date
      2011-10-05
    • Related Report
      2011 Annual Research Report
  • [Presentation] Evaluation of in vivo genotoxicity of glycidol and 3-MCPD and associatedesters, using Pig-A and micronucleus assays2011

    • Author(s)
      大波冴子, et.al.
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋
    • Year and Date
      2011-10-05
    • Related Report
      2011 Annual Research Report
  • [Presentation] 新規in vivo遺伝子突然変異評価系(Pig-aアッセイ)の検討:骨髄エリスロイド及び末梢血網状赤血球を用いるPig-aアッセイの開発2011

    • Author(s)
      木本崇文,千藏さつき,鈴木久美子,小林小梅,板野泰弘, Vasily N. Dobrovolsky, Robert H. Heflich,堀端克良,本間正充,三浦大志郎,笠原義典
    • Organizer
      第38回日本トキシコロジー学会学術年会
    • Year and Date
      2011-07-11
    • Related Report
      2011 Final Research Report
  • [Presentation] 新規in vivo遺伝子突然変異評価系(Pig-aアッセイ)の検討:骨髄エリスロイド及び末梢血網状赤血球を用いるPig-aアッセイの開発2011

    • Author(s)
      木本崇文, et.al.
    • Organizer
      第38回日本トキシコロジー学会学術年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-07-11
    • Related Report
      2011 Annual Research Report
  • [Presentation] Molecular cloning of the gene for UV-Sensitive Syndrome with deficiencies in Transcription-coupled DNA repair2011

    • Author(s)
      Xue Zhang, Katsuyoshi Horibata, Masafumi Saijo, Chie Ishigami, Akiko Ukai, Shinichiro Kanno, Edward G. Neilan, Hidetoshi Tahara, Masamitsu Honma, Takehiko Nohmi, Akira Yasui and Kiyoji Tanaka
    • Organizer
      Conference : Response to DNA damage : from molecular mechanism to human disease
    • Place of Presentation
      Egmond aan Zee, Netherlands
    • Year and Date
      2011-04-04
    • Related Report
      2011 Final Research Report
  • [Presentation] Molecular cloning of the gene for UV-Sensitive Syndrome with deficiencies in Transcription-coupled DNA repair2011

    • Author(s)
      Zhang, X., et.al.
    • Organizer
      Conference : Response to DNA damage : from mole cular mechanism to human disease
    • Place of Presentation
      エグモント・アーン・ゼー
    • Year and Date
      2011-04-04
    • Related Report
      2011 Annual Research Report
  • [Presentation] In vivo gene mutation assay using endogenous Pig-A gene2010

    • Author(s)
      堀端克良,鵜飼明子,木本崇文,三浦大志郎,本間正充
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Year and Date
      2010-12-08
    • Related Report
      2011 Final Research Report
  • [Presentation] Molecular cloning of the gene for UV-sensitive syndrome with deficiencies in transcription-coupled DNA repair2010

    • Author(s)
      Zhang Xue,石上智愛,堀端克良,鵜飼明子,本間正充,能美健彦,田原英俊,田中亀代次
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Year and Date
      2010-12-08
    • Related Report
      2011 Final Research Report
  • [Presentation] In vivo gene mutation assay using endogenous Pig-A gene2010

    • Author(s)
      Horibata, K., et al.
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Year and Date
      2010-12-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] Molecular cloning of the gene for UV-Sensitive Syndrome with deficiencies in Transcription-coupled DNA repair2010

    • Author(s)
      Zhang, X., et al.
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Year and Date
      2010-12-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] DNA2本鎖切断修復に対する低線量放射線等の環境ストレスの影響2010

    • Author(s)
      本間正充,安井学,堀端克良,鈴木哲矢,谷田貝文夫
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Year and Date
      2010-12-07
    • Related Report
      2011 Final Research Report
  • [Presentation] Non-genotoxic effects of low-dose ionizing irradiation on DNA double str and break repair2010

    • Author(s)
      Honma, M., et al.
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Year and Date
      2010-12-07
    • Related Report
      2010 Annual Research Report
  • [Presentation] gpt deltaトランスジェニックマウス由来初代培養肝細胞を用いたin vitro遺伝毒性試験2010

    • Author(s)
      堀端克良,鵜飼明子,増村健一,能美健彦,本間正充
    • Organizer
      日本環境変異原学会第39回大会
    • Year and Date
      2010-11-16
    • Related Report
      2011 Final Research Report
  • [Presentation] In viro genotoxicity assay using primary hepatocytes derived from gpt delta transgeinc mouse2010

    • Author(s)
      Horibata, K., et al.
    • Organizer
      日本環境変異原学会第39回大会
    • Place of Presentation
      つくば国際会議場(茨城県)
    • Year and Date
      2010-11-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] IN VITRO CHROMOSOME ABERRATION AND CELL TRANSFORMATION TESTS ON FULLEREN AND MALTI-WALL CARBON NANOTUBES2010

    • Author(s)
      Masamitsu Honma, Katsuyoshi Horibata, Toshitaka Takahashi, Shin Asada, Takumi Hara, Yuzuki Nakagawa, Atsuko Ikeda, Kohji Yamakage and Akihiko Hirose
    • Organizer
      40th Meeting of European Environmental Mutagen Society
    • Place of Presentation
      Oslo, Norway
    • Year and Date
      2010-09-16
    • Related Report
      2011 Final Research Report
  • [Presentation] IN VITRO CHROMOSOME ABERRATION AND CELL TRANSFORMATION TESTS ON FULLEREN AND MALTI-WALL CARBON NANOTUBES2010

    • Author(s)
      Honma, M., et al.
    • Organizer
      European Environmental Mutagen Society 40^<th> Annual Meeting
    • Place of Presentation
      Oslo(Norway)
    • Year and Date
      2010-09-16
    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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