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Protein folding study by real-time folding-unfolding proteolysis

Research Project

Project/Area Number 22710215
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Living organism molecular science
Research InstitutionKyoto Prefectural University (2011)
Osaka University (2010)

Principal Investigator

TAKANO Kazufumi  京都府立大学, 大学院・生命環境科学研究科, 教授 (40346185)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2011: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2010: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords生体高分子 / タンパク質 / フォールディング / プロテアーゼ / フォールデング
Research Abstract

In this work, we examined the slow unfolding pathway of Tk-RNase H2 by pulse proteolysis using a super-stable protease. Through these experiments, we found that Tk-RNase H2 includes two different forms with N-state and N'-state in the native state. The N-state has the large hydrophobic surface in the C-terminal region. In the early stage of unfolding, the N-state changes to an intermediate state(A-state) which is digested by protease at the C-terminal region. In contrast, the N'-state is a protease resistant form. In the slow unfolding pathway, the A-state shifts to the N'-state which gradually unfolds.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (12 results)

All 2012 2011 2010

All Journal Article (3 results) (of which Peer Reviewed: 2 results) Presentation (6 results) Book (3 results)

  • [Journal Article] Stabilization by fusion to the C-terminus of hyperthermophile sulfolobus tokodaii RNase HI : A possibility of protein stabilization tag2011

    • Author(s)
      Takano K, Okamoto T, Okada J, Tanaka S-i, Angkawidjaja C, Koga Y, Kanaya S.
    • Journal Title

      PLoS ONE

      Volume: 6 Issue: 1 Pages: e16226-e16226

    • DOI

      10.1371/journal.pone.0016226

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Evolution and thermodynamics of slow unfolding of hyperstable monomeric proteins2010

    • Author(s)
      Okada J, Okamoto T, Mukaiyama A, Tadokoro T, You DJ, Chon H, Koga Y, Takano K, Kanaya S.
    • Journal Title

      BMC Evol.Biol

      Volume: 10 Issue: 1 Pages: 207-207

    • DOI

      10.1186/1471-2148-10-207

    • Related Report
      2011 Final Research Report
  • [Journal Article] Evolution and thermodynamics of slow unfolding of hyperstable monomeric proteins2010

    • Author(s)
      Okada, et al.
    • Journal Title

      BMC Evol.Biol.

      Volume: 10

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Slow Unfolding of Hyperstable Proteins2012

    • Author(s)
      Kazufumi Takano
    • Organizer
      37th Lorne Conference on Protein Structure and Function
    • Place of Presentation
      Lorne (Australia)
    • Year and Date
      2012-02-05
    • Related Report
      2011 Annual Research Report
  • [Presentation] Protein Stabilization Tag2012

    • Author(s)
      Kazufumi Takano
    • Organizer
      PepTalk 2012
    • Place of Presentation
      San Diego (USA)
    • Year and Date
      2012-01-09
    • Related Report
      2011 Annual Research Report
  • [Presentation] Slow Unfolding of Hyperstable Proteins2012

    • Author(s)
      Takano K.
    • Organizer
      37th Lorne Conference on Protein Structure and Function
    • Place of Presentation
      Lorne(Australia)
    • Related Report
      2011 Final Research Report
  • [Presentation] Protein Stabilization Tag2012

    • Author(s)
      Takano K.
    • Organizer
      Pep Talk 2012
    • Place of Presentation
      San Diego(USA)
    • Related Report
      2011 Final Research Report
  • [Presentation] Protein Folding Studies and Applications by Hyperstable Proteins2010

    • Author(s)
      Kazufumi Takano
    • Organizer
      3rd World Congress of Industrial Biotechnology 2010
    • Place of Presentation
      Dalian (China)
    • Year and Date
      2010-07-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] Evolution and Thermodynamics for Slow Unfolding of Hyperstable Proteins2010

    • Author(s)
      Okada J, Okamoto T, Mukaiyama A, Tadokoro T, You DJ, Chon H, Koga Y, Takano K, Kanaya S.
    • Organizer
      8th International Congress on Extremophiles
    • Place of Presentation
      Ponta Delgada(Portugal)
    • Related Report
      2011 Final Research Report
  • [Book] Folding and unfolding of hyperthermophilic proteins ; molecular basis of adaptation to hot environment. Protein Folding2011

    • Author(s)
      Mukaiyama A, Takano K, E. C. Walters
    • Publisher
      Nova Science
    • Related Report
      2011 Final Research Report
  • [Book] Delineation of the conformational thermostability of hyperthermophilic proteins based on structural and biophysical analyses. Thermostable Proteins : Structural Stability and Design2011

    • Author(s)
      Mukaiyama A, Takano K, S. Sen & L. Nilsson
    • Publisher
      CRC Press
    • Related Report
      2011 Final Research Report
  • [Book] Delineation of the Conformational Thermostability of Hyperthermophilic Proteins Based on Structural and Biophysical Analyses2011

    • Author(s)
      Atsushi Mukaiyama, Kazufumi Takano
    • Total Pages
      20
    • Publisher
      CRC Press
    • Related Report
      2011 Annual Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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