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Phytochrome-mediated growth phase transition in land plants

Research Project

Project/Area Number 22770035
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Plant molecular biology/Plant physiology
Research InstitutionKyoto University

Principal Investigator

ISHIZAKI Kimitsune  京都大学, 大学院・生命科学研究科, 助教 (00452293)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2011: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2010: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords環境応答 / 成長相転換 / 陸上植物 / コケ植物 / フィトクロム / 光シグナル伝達 / メリステム / 転写因子 / 生殖 / ゼニゴケ / 分裂組織
Research Abstract

Plants regulate their growth phase transition in response to light environment such as day-length and light qualities. We focused on a red/far-red receptor, phytochrome, as a key regulator of growth phase transition, and investigated the phytochrome-mediated signaling mechanism in the liverwort Marchantia polymorpha. We showed that phytochrome is translocated to nucleus in response to light. A series of transgenic approaches suggested that phytochrome regulates gene expression via a homologue of transcription factor, PHYTOCHROME INERACTING FACTOR(PIF). Our results also implied that the active-form phytochrome up-regulated the expression cyclin D, a core regulator of cell cycle progression. Taken together, phytochrome in Marchantia could regulate the growth phase transition by regulating, possibly via PIF, the nuclear gene expression of cell cycle gene such as cyclin D.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (34 results)

All 2012 2011 2010 Other

All Journal Article (8 results) (of which Peer Reviewed: 7 results) Presentation (25 results) Remarks (1 results)

  • [Journal Article] Visualization of auxin-mediated transcriptional activation using a common auxin-responsive reporter system in the liverwort Marchantia polymorpha2012

    • Author(s)
      Ishizaki K., Nonomura M., Kato H., Yamato K.T., Kohchi T.
    • Journal Title

      Journal of Plant Research

      Volume: 125 Issue: 5 Pages: 826-834

    • DOI

      10.1007/s10265-012-0477-7

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of the plasma membrane H+-ATPase in the liverwort Marchantia polymorpha.2012

    • Author(s)
      Okumura M, Inoue S, Takahashi K, Ishizaki K, Kohchi T, Kinoshita T.
    • Journal Title

      Plant Physiology

      Volume: 159 Issue: 2 Pages: 826-834

    • DOI

      10.1104/pp.112.195537

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of a range of catabolic mutants provides evidence that phytanoyl-CoA does not act as a substrate of the ETF/ETFQO complex in Arabidopsis thaliana during dark induced senescence2011

    • Author(s)
      Araujo WL, Ishizaki K, Nunes-Nesi A, Tohge T, Larson TR, Krahnert I, Balbo I, Witt S, Dormann P, Graham IA, Leaver CJ, and Fernie AR
    • Journal Title

      Plant Physiol

      Volume: 157 Issue: 1 Pages: 55-59

    • DOI

      10.1104/pp.111.182188

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Protein degradation-an alternative respiratory substrate for stressed plants2011

    • Author(s)
      Araujo WL, Tohge T, Ishizaki K, Leaver CJ, and Fernie AR
    • Journal Title

      Trend Plant Sci

      Volume: 16 Issue: 9 Pages: 489-498

    • DOI

      10.1016/j.tplants.2011.05.008

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification of the 2-hydroxyglu tarate and isovaleryl-CoA dehydrogenase as alternative electron doners linking lysine catabolism to the electron transport chain of Arabidopsis mitochomdria2010

    • Author(s)
      Araujo WL, Ishizaki K, Nunes-Nesi A, Larson TL, Tohge T, Krahnert I, Witt S, Obata T, Schauer N, Graham IA, Leaver CJ, and Fernie AR
    • Journal Title

      Plant Cell

      Volume: 22 Issue: 5 Pages: 1549-1563

    • DOI

      10.1105/tpc.110.075630

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Evolutionarily conserved regulatory mechanisms of abscisic acid signaling in land plants : characterization of ABSCISIC ACID INSENSITIVE1-like type 2C protein phosphatase in the liverwort Marchantia polymorpha2010

    • Author(s)
      Tougane K, Komatsu K, Bhyan SB, Sakata Y, Ishizaki K, Yamato KT, Kohchi T, and Takezawa D
    • Journal Title

      Plant Physiol

      Volume: 152 Pages: 1529-1543

    • Related Report
      2011 Final Research Report
  • [Journal Article] Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria.2010

    • Author(s)
      Araujo W.L., Ishizaki K., Nunes-Nesi A., Larson T.R., Tohge T., Krahnert I., Witt S., Obata T., Schauer N., Graham I.A., Leaver C.J., Fernie A.R., These authors contributed equally to this work.
    • Journal Title

      The Plant Cell

      Volume: 22 Pages: 1549-1563

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evolutionarily conservecd regulatory mechanisms of abscisic acid signaling in land plants : characterization of ABSCISIC ACID INSENSITIVE1-like type 2C protein phosphatase in the liverwort Marchantia polymorpha.2010

    • Author(s)
      Tougane K., Komatsu K., Bhyan S.B., Sakata Y., Ishizaki K., Yamato K.T., Kohchi T., Takezawa D.
    • Journal Title

      Plant Physiology

      Volume: 152 Pages: 1529-1543

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] 赤色光は苔類ゼニゴケの細胞分裂を制御する2012

    • Author(s)
      井上佳祐、中村衣里、保坂将志、石崎公庸、西浜竜一、河内孝之
    • Organizer
      日本農芸化学会2012年度大会
    • Place of Presentation
      京都・京都女子大学
    • Year and Date
      2012-03-25
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] 青色光受容体フォトトロピンは苔類ゼニゴケの葉状体背腹性決定を制御する2012

    • Author(s)
      芦原悠紀子, 小松愛乃, 石崎公庸, 西浜竜一, 河内孝之
    • Organizer
      日本農芸化学会2012年度大会
    • Place of Presentation
      京都・京都女子大学
    • Year and Date
      2012-03-25
    • Related Report
      2011 Annual Research Report
  • [Presentation] 苔類ゼニゴケ気室形成異常株nopperabolの解析2012

    • Author(s)
      水谷未耶, 増田晃秀, 桐田啓和, 石崎公庸, 河内孝之
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都・京都産業大学
    • Year and Date
      2012-03-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] 苔類ゼニゴケにおける赤色光による細胞周期制御機構2012

    • Author(s)
      中村衣里, 保坂将志, 井上佳祐, 石崎公庸, 西浜竜一, 河内孝之
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都・京都産業大学
    • Year and Date
      2012-03-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] 苔類ゼニゴケは転写因子PIFを介する赤色光シグナル伝達機構をもつ2012

    • Author(s)
      井上佳祐、石崎公庸、岡義人、河内孝之
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都・京都産業大学
    • Year and Date
      2012-03-17
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] 基部陸上植物ゼニゴケを用いた基部陸上植物概日時計関連因子の解析2012

    • Author(s)
      久保田茜, 喜多祥吾, 久保田佐綾, 村中智明, 石崎公庸, 大和勝幸, 青木摂之, 小山時隆, 河内孝之
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都・京都産業大学
    • Year and Date
      2012-03-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] 苔類ゼニゴケにおけるフォトトロピン機能欠損変異体の単離と解析2012

    • Author(s)
      小松愛乃, 芦原悠紀子, 坪井秀憲, 末次憲之, 石崎公庸, 和田正三, 河内孝之
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都・京都産業大学
    • Year and Date
      2012-03-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] 遺伝子機能を自在に研究できるモデルへゲノム・突然変異体・形質転換2012

    • Author(s)
      石崎公庸、大和勝幸、河内孝之
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都・京都産業大学
    • Year and Date
      2012-03-16
    • Related Report
      2011 Final Research Report
  • [Presentation] 遺伝子機能を自在に研究できるモデルへ~ゲノム・突然変異体・形質転換-2012

    • Author(s)
      石崎公庸, 大和勝幸, 河内孝之
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都・京都産業大学(招待講演)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] T-DNAタギング法による苔類ゼニゴケオーキシン低感受性変異体の単離と解析2012

    • Author(s)
      武田真由子, 加藤大貴, 石崎公庸, 河内孝之
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都・京都産業大学
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] The liverwort Marchantia polymorpha as a model for evolutionary and developmental biology2011

    • Author(s)
      Ishizaki K.
    • Organizer
      Strategy of plants against global environmental change
    • Place of Presentation
      岡山・倉敷芸文館
    • Year and Date
      2011-12-09
    • Related Report
      2011 Annual Research Report
  • [Presentation] 苔類ゼニゴケにおけるオーキシン転写制御機構の役割2011

    • Author(s)
      加藤大貴, 石崎公庸, 河内孝之
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都・国際会館
    • Year and Date
      2011-09-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] 基部陸上植物ゼニゴケにおける概日時計関連因子の比較ゲノム解析2011

    • Author(s)
      久保田茜、喜多祥吾、久保田佐綾、村中智明、石崎公庸、大和勝幸、青木摂之、小山時隆、河内孝之
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都・国際会館
    • Year and Date
      2011-09-22
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] 基部陸上植物の光応答-フィトクロムを介した光形態形成の分子機構2011

    • Author(s)
      石崎公庸、井上佳祐、保坂将志、片岡秀夫、大和勝幸、河内孝之
    • Organizer
      日本植物学会第75回大会
    • Place of Presentation
      東京・東京大学駒場キャンパス
    • Year and Date
      2011-09-18
    • Related Report
      2011 Final Research Report
  • [Presentation] 基部陸上植物の光応答~フィトクロムを介した光形態形成の分子機構-2011

    • Author(s)
      石崎公庸, 井上佳祐, 保坂将志, 片岡秀夫, 大和勝幸, 河内孝之
    • Organizer
      日本植物学会第75回大会
    • Place of Presentation
      東京・東京大学駒場キャンパス(招待講演)
    • Year and Date
      2011-09-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] Transgenesis of the liverwort Marchantia polymorpha and its application to developmental genetics2011

    • Author(s)
      Ishizaki K, Matsuda A, Saida Y, Ueda M, Yamato KT, and Kohchi T
    • Organizer
      XVIII International Botanical Congress
    • Place of Presentation
      Merbourne, Australia
    • Year and Date
      2011-07-25
    • Related Report
      2011 Final Research Report
  • [Presentation] Transgenesis of the liverwort Marchantia polymorpha and its application to developmental genetics2011

    • Author(s)
      Ishizaki K, Masuda A, Saida Y, Ueda M, Yamato KT, Kohchi T
    • Organizer
      XVIII International Botanical Congress
    • Place of Presentation
      Merbourne, Australia(招待講演)
    • Year and Date
      2011-07-25
    • Related Report
      2011 Annual Research Report
  • [Presentation] 苔類ゼニゴケにおける赤色光受容体フィトクロムを介した生長制御2011

    • Author(s)
      井上佳祐、石崎公庸、保坂将志、片岡秀夫、大和勝幸、河内孝之
    • Organizer
      第52回日本植物生理学会年会
    • Place of Presentation
      (震災のため開催は中止、要旨集により発表 要旨集発行)
    • Year and Date
      2011-03-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] 苔類ゼニゴケにおける分子遺伝学の基盤整備:T-DNAタギング法による順遺伝学的解析手法の確立2011

    • Author(s)
      増田晃秀、石崎公庸、齊田有桂、水谷未耶、大和勝幸、河内孝之
    • Organizer
      第52回日本植物生理学会年会
    • Place of Presentation
      (震災のため開催は中止、要旨集により発表 要旨集発行)
    • Year and Date
      2011-03-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] γ線照射胞子より単離したゼニゴケオーキシン耐性株の解析2011

    • Author(s)
      野々村麻衣子、石崎公庸、大和勝幸、河内孝之
    • Organizer
      第52回日本植物生理学会年会
    • Place of Presentation
      (震災のため開催は中止、要旨集により発表 要旨集発行)
    • Year and Date
      2011-03-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] 苔類ゼニゴケにおけるMpIAAを介したオーキシン信号伝達の機能解析2011

    • Author(s)
      加藤大貴、石崎公庸、大和勝幸、河内孝之
    • Organizer
      第52回日本植物生理学会年会
    • Place of Presentation
      (震災のため開催は中止、要旨集により発表 要旨集発行)
    • Year and Date
      2011-03-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] 苔類ゼニゴケにおける時計機構と生長相制御の解析2011

    • Author(s)
      久保田茜、久保田佐綾、村中智明、石崎公庸、大和勝幸、青木摂之、小山時隆、河内孝之
    • Organizer
      第52回日本植物生理学会年会
    • Place of Presentation
      (震災のため開催は中止、要旨集により発表 要旨集発行)
    • Year and Date
      2011-03-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] 苔類ゼニゴケの青色光受容体フォトトロピンの単離と青色光応答の解析2011

    • Author(s)
      小松愛乃、坪井秀憲、末次憲之、石崎公庸、大和勝幸、和田正三、河内孝之
    • Organizer
      第52回日本植物生理学会年会
    • Place of Presentation
      (震災のため開催は中止、要旨集により発表 要旨集発行)
    • Year and Date
      2011-03-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] 半数体植物ゼニゴケにおける順遺伝学的解析手法の確立2011

    • Author(s)
      石崎公庸、増田晃秀、齊田有桂、水谷未耶、大和勝幸、河内孝之
    • Organizer
      日本農芸化学会2011年度大会
    • Place of Presentation
      (震災のため開催は中止、要旨集により発表 要旨集発行)
    • Year and Date
      2011-03-05
    • Related Report
      2010 Annual Research Report
  • [Presentation] 苔類ゼニゴケの光受容体フィトクロムを介した細胞分裂制御2011

    • Author(s)
      井上佳祐、石崎公庸、保坂将志、片岡秀夫、大和勝幸、河内孝之
    • Organizer
      日本農芸化学会2011年度大会
    • Place of Presentation
      (震災のため開催は中止、要旨集により発表 要旨集発行)
    • Year and Date
      2011-03-05
    • Related Report
      2010 Annual Research Report
  • [Remarks] 参考として所属する研究室HPのURLを下に示す

    • URL

      http://www.lif.kyoto-u.ac.jp/labs/plantmb/

    • Related Report
      2011 Annual Research Report

URL: 

Published: 2010-08-23   Modified: 2016-04-21  

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