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Is there aneuploid evolution?

Research Project

Project/Area Number 22770078
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Biodiversity/Systematics
Research InstitutionChiba University

Principal Investigator

KIKUCHI Shinji  千葉大学, 大学院・園芸学研究科, 助教 (80457168)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2011: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2010: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Keywordsトレニア / 染色体 / 種分化 / SSR マーカー / 連鎖地図 / FISH / 遺伝資源 / SSRマーカー
Research Abstract

To identify an extra chromosome observed in interspecific hybrid between Torenia fournieri (2n=2x=18) and Torenia baillonii (2n=2x=16) at DNA level, 169 SSR markers were developed using fosmid and cDNA clone sequences and a partial linkage map was constructed in F_2 population of T. fournieri and T. violacea. Next, fosmid-FISH analysis has been conducted to screen fosmid clones derived from the extra chromosome, but the FISH signals of 19 clones tested did not formed on the extra chromosome. In addition, phylogenic analysis including other 7 Torenia species collected in south Asia suggests a hypothesis that T. baillonii lost the extra chromosome during the speciation.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (18 results)

All 2012 2011 2010 Other

All Journal Article (7 results) (of which Peer Reviewed: 7 results) Presentation (9 results) Remarks (2 results)

  • [Journal Article] Iniguez, Jiming Jiang, Euchromatic subdomains in rice centromeres are associated with genes and transcription. Plant Cell2011

    • Author(s)
      Yufeng Wu, Shinji Kikuchi, HuihuangYan, Wenli Zhang, Heidi Rosenbaum, Leonardo A
    • Journal Title

      equal contribution

      Volume: 23 Pages: 4054-4064

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Effects of gamma-ray irradiation in plant morphology of interspecific hybrids between Torenia fournieri and Torenia baiilonii2011

    • Author(s)
      Wipaporn Sawangmee, Thunya Taychasinpitak, Peeranuch Jompuk, Shinji Kikuchi
    • Journal Title

      Kasetsart Journal

      Volume: 45 Pages: 1-8

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Euchromatic subdomains in rice centromeres are associated with genes and transcription2011

    • Author(s)
      Yufeng Wu
    • Journal Title

      Plant Cell

      Volume: 23 Pages: 4054-4064

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genome-widemapping of cytosine methylation revealed dynamic DNA methylation patterns associated with genes and centromeres in rice. Plant Journal2010

    • Author(s)
      Huihuang Yan, Shinji Kikuchi, Pavel Neumann, Wenli Zhang, Yufeng Wu, Feng Chen, Jiming Jiang
    • Journal Title

      equal contribution

      Volume: 63 Pages: 353-365

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] anovel subtelomeric repeat of Jatropha curcas L. and its use in karyotyping2010

    • Author(s)
      Shinji Kikuchi, Hisashi Tsujimoto, Hidenori Sassa, Takato Koba, JcSat1
    • Journal Title

      Chromosome Science

      Volume: 13 Pages: 11-16

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Apple S locus region represents a large cluster of related, polymorphic and pollen-specific F-box genes2010

    • Author(s)
      Mai Minamikawa, Hiroyuki Kakui, Sanhong Wang, Nobuhiro Kotoda, ShinjiKikuchi, Takato Koba, Hidenori Sassa
    • Journal Title

      Plant Molecular Biology

      Volume: 74 Pages: 143-154

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] A simple method of chromosome doubling using colchicines in Torenia (Linderniaceae), and the behavior of meiotic chromosomes in amphidiploids. Chromosome Science

    • Author(s)
      Jiraporn Jiranapapan, Shinji Kikuchi, Benya Manochai, Thunya Taychasinpitak, Hiroyuki Tanaka, Hisashi Tsujimoto
    • Journal Title

      equal contribution

      Volume: (受理済・印刷中)

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Presentation] An extra chromosome of Torenia fournieri2012

    • Author(s)
      S. Kikuchi
    • Organizer
      MUSC joint seminar and graduate forum in science & technology
    • Place of Presentation
      タイ・マヒドン大学
    • Year and Date
      2012-03-15
    • Related Report
      2011 Final Research Report
  • [Presentation] An extra chromosome of Torenia fournieri2012

    • Author(s)
      Shinji Kikuchi
    • Organizer
      2012 Joint Seminar (CU-KSU-MUSC) in Science and Technology
    • Place of Presentation
      Mahidol University (Thailand)(招待講演)
    • Year and Date
      2012-03-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] Koba 、Meiotic behavior and chromosome number variation in amphidiploid between Triticum durum and Aegilops uniaristata2012

    • Author(s)
      K. Nagataki, S. Kikuchi, K. Mishina,
    • Organizer
      MUSC joint seminar and graduate forum in science & technology
    • Place of Presentation
      タイ・マヒドン大学
    • Year and Date
      2012-03-06
    • Related Report
      2011 Final Research Report
  • [Presentation] イネ動原体におけるユークロマティックなヒストン修飾2011

    • Author(s)
      Wu Y, Kikuchi S, Yan H, Zhang W, Rosenbaum H, Iniguez L, Jiang J
    • Organizer
      染色体学会
    • Place of Presentation
      神奈川大学
    • Year and Date
      2011-11-13
    • Related Report
      2011 Annual Research Report
  • [Presentation] イネ動原体におけるユークロマティックなヒストン修飾2011

    • Author(s)
      Wu Y., Kikuchi S., Yan H., Zhang W.,Rosenbaum H., Iniguez L., Jiang J
    • Organizer
      第62回染色体学会年会
    • Place of Presentation
      神奈川大学
    • Year and Date
      2011-11-11
    • Related Report
      2011 Final Research Report
  • [Presentation] Takato Koba 、Structural features of the S locus od Apple 、International workshop2011

    • Author(s)
      Hidenori Sassa, Sanhong Wang, MaiMinamikawa, Hiroyuki Kakui, ShinjiKikuchi
    • Organizer
      Floral biology and S-incompatibility in fruit species
    • Place of Presentation
      イタリア・ボローニャ大学
    • Related Report
      2011 Final Research Report
  • [Presentation] イネゲノムにおけるDNAメチル化解析2010

    • Author(s)
      Huihuang Yan, Shinji Kikuchi, Pavel Neumann, Zhang Wenli, Wu Yufeng, Chen Feng, Jiang Jiming
    • Organizer
      第61回染色体学会年会
    • Place of Presentation
      東邦大学
    • Year and Date
      2010-11-07
    • Related Report
      2011 Final Research Report
  • [Presentation] 花卉園芸植物トレニア属における分子系統解析と染色体数2010

    • Author(s)
      菅野健太
    • Organizer
      染色体学会
    • Place of Presentation
      東邦大学(千葉県)
    • Year and Date
      2010-11-05
    • Related Report
      2010 Annual Research Report
  • [Presentation] Hidenori Sassa、S-RNase and SFBB family F-box genes are located in sub-telomeric and heterochromatic chromosomal region in apple2010

    • Author(s)
      Sanhong Wang, Hiroyuki Kakui, Shinji Kikuchi, Takato Koba
    • Organizer
      XXI International Congress on Sexual Plant Reproduction
    • Place of Presentation
      イギリス・ブリストル大学
    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.h.chiba-u.jp/iden/

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.h.chiba-u.jp/iden/

    • Related Report
      2011 Annual Research Report

URL: 

Published: 2010-08-23   Modified: 2016-04-21  

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