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Structural analysis for the urea transporter

Research Project

Project/Area Number 22770100
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

YAMAGATA Atsushi  東京大学, 放射光連携研究機構, 助教 (20463903)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2011: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2010: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
KeywordsX線結晶解析 / タンパク質 / 構造生物学
Research Abstract

We succeeded the expression and purification of the urea transporter from Desulfovibrio vulgaris. After the optimization of the detergent, we obtained the crystals using the decyl maltoside. We collected the low resolution diffraction dataset on this crystal. We expressed the mouse urea transporter as the GFP fused form. FSEC analysis revealed that the mouse urea transporter exists as the monodisperse state, suitable for the structural analysis.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (7 results)

All 2012 2011 2010 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (1 results) Book (1 results) Remarks (2 results)

  • [Journal Article] Structure of an essential type IV pilus assembly protein provides insights into pilus and type II secretion systems2012

    • Author(s)
      山形敦史
    • Journal Title

      J.Mol.Biol.

      Volume: (In press) Issue: 1-2 Pages: 110-124

    • DOI

      10.1016/j.jmb.2012.02.041

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Specific recognition of linear ubiquitin chains by the Npl4 zinc finger(NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex2011

    • Author(s)
      Sato, Y., Fujita, H., Yoshikawa, A., Yamashita, M., Yamagata, A., Kaiser, S. E., Iwai, K., Fukai, S
    • Journal Title

      Proceedings of National Academy of Science United States of America

      Volume: 108巻 Issue: 51 Pages: 20520-20525

    • DOI

      10.1073/pnas.1109088108

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Get複合体によるTail-anchoredタンパク質の膜埋込みメカニズム2011

    • Author(s)
      山形敦史
    • Journal Title

      日本結晶学会誌

      Volume: 53 Pages: 264-268

    • NAID

      10029532125

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] GET3による翻訳後膜挿入機構の構造学的基盤2010

    • Author(s)
      山形敦史
    • Organizer
      平成22年度 日本結晶学会年会
    • Place of Presentation
      大阪大学コンベンションセンター
    • Related Report
      2010 Annual Research Report
  • [Book] 日本結晶学会誌2011

    • Author(s)
      山形敦史
    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.iam.u-tokyo.ac.jp/srro/SRROLifeSciDivJp2/Welcome.html

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.iam.u-tokyo.ac.jp/srro/SRROLifeSciDivJp2/Welcome.html

    • Related Report
      2011 Annual Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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