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Dynamic structural analysis of histone in nucleosome using solid-state NMR

Research Project

Project/Area Number 22770108
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionYokohama City University

Principal Investigator

TODOKORO Yasuto  横浜市立大学, 生命ナノシステム科学研究科, 特任助教 (00533150)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Fiscal Year 2011: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2010: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords核磁気共鳴法 / 固体NMR / 構造生物学 / ヌクレオソーム / ヒストン / クロマチン / 天然変性
Research Abstract

In eukaryotic cells the fundamental structural unit of chromatin is a nucleosome core, consisting of two copies of four histones and DNA, whose crystalline structures have been determined. However in the crystals the N-terminal histone tails, which are responsible for gene regulations by their chemical modifications could not be well identified. Here, we have examined the structures of N-terminal histone tails by solid-state NMR and suggested that the histone tails hold flexible random coil structures, which might play significant roles in gene regulations.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (12 results)

All 2012 2011 2010 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (7 results) Remarks (2 results)

  • [Journal Article] Purification, characterization and reconstitution into membranes of the oligomeric c-subunit ring of thermophilic F_OF_1-ATP synthase expressed in Escherichia coli2012

    • Author(s)
      Yumen I, Iwasaki I, Suzuki T, Todokoro Y, Tanaka K, Okada O, Fujiwara T, Yoshida M, Akutsu H.
    • Journal Title

      Protein Expr Purif

      Volume: 82 Pages: 396-401

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Purification, characterization and reconstitution into membranes of the oligomeric c-subunit ring of thermophilic F_0F_1-ATP synthase expressed in Escherichia coli2012

    • Author(s)
      I Yumen, I Iwasaki, T Suzuki, Y Todokoro, K Tanaka, O Okada, T Fujiwara, M Yoshida, H Akutsu
    • Journal Title

      Protein Expr Purif

      Volume: 82 Issue: 2 Pages: 396-401

    • DOI

      10.1016/j.pep.2012.02.005

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structure analysis of membrane-reconstituted subunit c-ring of E. coli H^+-ATP synthase by solid-state NMR2010

    • Author(s)
      Todokoro Y, Kobayashi M, Sato T, Kawakami T, Yumen I, Aimoto S, Fujiwara T, Akutsu H.
    • Journal Title

      J Biomol NMR

      Volume: 48 Pages: 1-11

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Presentation] 質量分析で観測されるヒストンテイルの挙動2012

    • Author(s)
      七種和美、畔上奈々子、戸所泰人、長土居有隆、立和名博昭、胡桃坂仁志、西村善文、明石知子
    • Organizer
      新学術領域研究「天然変性タンパク質の分子認識機構と機能発現」第二回公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター・ライフホール(大阪)
    • Year and Date
      2012-01-24
    • Related Report
      2011 Annual Research Report
  • [Presentation] 質量分析で観測されるヒストンテイルの挙動.新学術領域研究「天然変性タンパク質の分子認識機構と機能発現」2012

    • Author(s)
      七種和美、畔上奈々子、戸所泰人、長土居有隆、立和名博昭、胡桃坂仁志、西村善文、明石知子
    • Organizer
      第二回公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター(大阪)
    • Related Report
      2011 Final Research Report
  • [Presentation] Solid-state NMR analysis of H^+-ATP synthase subunit c-ring from Thermophilic Bacillus2011

    • Author(s)
      S-J Kangl, S Bak, Y Todokoro, I Yumen, I Iwasaki, T Suzuki, T Fujiwara, M Yoshida, H Akutsu
    • Organizer
      第50回NMR討論会記念国際シンポジウムThe International Symposium on Nuclear Magnetic Resonance 2011 (ISNMR 2011)
    • Place of Presentation
      大さん橋ホール(神奈川)
    • Year and Date
      2011-11-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] 脂質二重膜再構成H^+-ATP合成酵素subunit c-ringの固体高分解能NMR法による構造解析2011

    • Author(s)
      戸所泰人、カンスジン、田中健太郎、湯面郁子、岩崎郁、鈴木俊治、吉田賢右、藤原敏道、阿久津秀雄
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      ホテル阪急エキスポパーク(大阪)
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] Solid-state NMR analysis of H+-ATP synthase subunit c-ring from Thermophilic Bacillus2011

    • Author(s)
      Kang S-J, Bak S, Todokoro Y, Yumen I, Iwasaki I, Suzuki T, Fujiwara T, Yoshida M, Akutsu H
    • Organizer
      第50回NMR討論会記念国際シンポジウムThe International Symposium on Nuclear Magnetic Resonance 2011(ISNMR 2011)
    • Place of Presentation
      大さん橋ホール(神奈川)
    • Related Report
      2011 Final Research Report
  • [Presentation] 脂質二重膜へ再構成プロトンATP合成酵素subunit c-ringの固体高分解能NMR法による構造解析2010

    • Author(s)
      戸所泰人、田中健太郎、湯面郁子、岩崎郁、鈴木俊治、吉田賢右、藤原敏道、阿久津秀雄
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Related Report
      2011 Final Research Report
  • [Presentation] Expression and purification of H+ATP synthase subunit c-ring from Thermophilic Bacillus and its structure analysis by solid-state NMR2010

    • Author(s)
      Kang S-J, Todokoro Y, Yumen I, Iwasaki I, Tanaka K, Suzuki T, Yoshida M, Fujiwara T, Akutsu H.
    • Organizer
      23rd International Conferences on Magnetic Resonance in Biological Systems(ICMRBS)
    • Place of Presentation
      Cairns Convention Centre(Australia)
    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.tsurumi.yokohama-cu.ac.jp/stbiol/index.html

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.tsurumi.yokohama-cu.ac.jp/stbiol/index.html

    • Related Report
      2011 Annual Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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