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Mutagenesis analysis of hydrogen bond network formed in bovine heart cytochrome c oxidase

Research Project

Project/Area Number 22770155
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Biophysics
Research InstitutionUniversity of Hyogo

Principal Investigator

AMINAKA Ryohta  兵庫県立大学, 大学院・生命理学研究科, 助教 (30467724)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2011: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2010: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywordsタンパク質 / 核酸の構造 / 動態 / 機能 / 酵素 / 核酸 / チトクロムc酸化酵素
Research Abstract

We carried out mutagenesis analyses of a hydrogen bond network, designated as D-pathway, formed in the bovine heart cytochrome c oxidase employing HeLa cell bovine/human hybrid enzyme expression system developed by us. A pathway corresponding to this D-pathway is also found in the bacterial enzymes, and has been proposed to convey both pumping and water forming protons. The structures of these two pathways are almost identical to each other and amino acid residues essential to the bacterial enzymes are conserved in the bovine enzyme. Hence, it has been thought that these two have the same function, thereby opposing to the proton-pumping pathway of the bovine enzyme proposed by us. The results of this study strongly suggest D-pathway is not for pumping proton but for water forming proton.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (14 results)

All 2012 2011 2010

All Journal Article (2 results) Presentation (12 results)

  • [Journal Article] Mutational analyses of D-pathway of bovine heart cytochrome c oxidase suggest that the pathway does not transfer the pumping protons2012

    • Author(s)
      R. Aminaka, M. Itoh, K. Shimokata, Y. Katayama, T. Tsukihara, S. Yoshikawa, H. Shimada
    • Journal Title

      Biochemica et Biophysica Acta

      Volume: Vol. 1817

    • Related Report
      2011 Final Research Report
  • [Journal Article] Mutagenesis studies on D-pathway function of bovine heart cytochrome c oxidase2010

    • Author(s)
      R. Aminaka, K. Shimokata, M. Itoh, Y. Katayama, T. Tsukihara, S. Yoshikawa, H. Shimada
    • Journal Title

      Biochemica et Biophysica Acta

      Volume: Vol. 1797 Pages: 93-94

    • Related Report
      2011 Final Research Report
  • [Presentation] Characterization by mutagenesis analysis of putative proton transfer pathway, D-pathway of bovine heart cytochrome c oxidase2012

    • Author(s)
      R. Aminaka, M. Itoh, K. Shimokata, Y. Katayama, T. Tsukihara, S. Yoshikawa and H. Shimada
    • Organizer
      第50回生物物理学会
    • Place of Presentation
      名古屋
    • Related Report
      2011 Final Research Report
  • [Presentation] Mutational analyses of D-pathway of bovine heart cytochrome c oxidase suggest that the pathway does not transfer the pumping protons2012

    • Author(s)
      R. Aminaka, K. Shimokata, M. Itoh, Y. Katayama, T. Tsukihara, S. Yoshikawa, H. Shimada
    • Organizer
      17th European Bioenergetics Conference
    • Place of Presentation
      フライブルク(ドイツ)
    • Related Report
      2011 Final Research Report
  • [Presentation] ウシ心筋チトクロムc酸化酵素のプロトン輸送経路の変異体解析2011

    • Author(s)
      網中良太、下方国稔、伊藤真衣、片山幸江、月原冨武、吉川信也、島田秀夫
    • Organizer
      第37回日本生体エネルギー研究会
    • Place of Presentation
      京都産業大学
    • Related Report
      2011 Final Research Report
  • [Presentation] Mutagenesis analysis of proton transport pathway suggested by X-ray structure of bovine heart cytochrome c oxidase2011

    • Author(s)
      R. Aminaka, K. Shimokata, M. Itoh, Y. Katayama, T. Tsukihara, S. Yoshikawa, H. Shimada
    • Organizer
      第49回日本生物物理学会
    • Place of Presentation
      兵庫県立大学
    • Related Report
      2011 Final Research Report
  • [Presentation] Mutagenesis analysis of proton transport pathway suggested by X-ray structure of bovine heart cytochrome c oxidase2011

    • Author(s)
      R. Aminaka, K. Shimokata, M. Itoh, Y. Katayama, T. Tsukihara, S. Yoshikawa, H. Shimada
    • Organizer
      第49回日本生物物理学会
    • Place of Presentation
      兵庫県立大学 (招待講演)
    • Related Report
      2011 Final Research Report
  • [Presentation] Mutagenesis analysis of proton transport pathway suggested by X-ray structure of bovine heart cytochrome c oxidase2011

    • Author(s)
      網中良太
    • Organizer
      第49回日本生物物理学会
    • Place of Presentation
      兵庫県立大学書写キャンパス(兵庫)
    • Related Report
      2011 Annual Research Report
  • [Presentation] ウシ心筋チトクロムc酸化酵素のプロトン輸送経路の変異体解析2011

    • Author(s)
      島田秀夫
    • Organizer
      第37回日本生体エネルギー研究会
    • Place of Presentation
      京都産業大学(京都)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Proton pumping pathway of bovine heart cytochrome c oxidase2010

    • Author(s)
      網中良太
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学
    • Year and Date
      2010-09-22
    • Related Report
      2010 Annual Research Report
  • [Presentation] Mutagenesis studies on D-pathway function of bovine heart cytochrome c oxidase2010

    • Author(s)
      網中良太
    • Organizer
      16^<th> European bioenergetics conference
    • Place of Presentation
      ワルシャワ大学(ポーランド)
    • Year and Date
      2010-07-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] ウシ心筋チトクロムc酸化酵素の水形成用プロトン輸送経路の変異体解析2010

    • Author(s)
      R. Aminaka, K. Shimokata, M. Itoh, Y. Katayama, T. Tsukihara, S. Yoshikawa, H. Shimada
    • Organizer
      第36回日本生体エネルギー研究会
    • Place of Presentation
      大阪大学
    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Presentation] Proton pumping pathway of bovine heart cytochrome c oxidase2010

    • Author(s)
      R. Aminaka, K. Shimokata, M. Ito, Y. Katayama, T. Tsukihara, S. Yoshikawa and H. Shimada
    • Organizer
      第48回日本生物物理学会
    • Place of Presentation
      東北大学
    • Related Report
      2011 Final Research Report
  • [Presentation] Mutagenesis studies on D-pathway function of bovine heart cytochrome c oxidase2010

    • Author(s)
      R. Aminaka, K. Shimokata, M. Itoh, Y. Katayama, T. Tsukihara, S. Yoshikawa, H. Shimada
    • Organizer
      16th European Bioenergetics Conference
    • Place of Presentation
      ワルシャワ(ポーランド)
    • Related Report
      2011 Final Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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