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Study on the molecular basis of environmental stress sensing and response in C. elegans intestinal cells

Research Project

Project/Area Number 22790081
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Biological pharmacy
Research InstitutionIwate Medical University

Principal Investigator

SHIRAISHI HIROHISA  岩手医科大学, 薬学部, 講師 (80393156)

Co-Investigator(Renkei-kenkyūsha) TOHYAMA Koujiro  岩手医科大学, 医歯薬総合研究所, 教授 (10129033)
OHASHI-KOBAYASHI Ayako  岩手医科大学, 薬学部, 教授 (90272484)
TANJI Takahiro  岩手医科大学, 薬学部, 助教 (60453320)
NISHIKORI Kenji  岩手医科大学, 薬学部, 助教 (20563844)
Project Period (FY) 2010-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2013: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2012: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2011: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2010: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywords線虫 / 腸細胞 / 飢餓 / ペントースリン酸回路 / ABC輸送体 / RNAi / 電子顕微鏡 / 薬学 / 飢餓ストレス / 電子顕微鏡観察 / RNAiスクリーニング / 細胞・組織 / 生体分子 / ストレス
Research Abstract

The intestinal cells of the nematode C. elegans possess enriched non-acidic granules for whose formation ABC transporters HAF-4 and HAF-9 are required. The abundant granules rapidly disappear upon food deprivation, suggesting the existence of unknown mechanisms on nutritional storage and starvation stress response at the organelle level. Light-microscopic and transmission electron microscopic observation of the starvation response revealed the rapid granular deterioration associated with the granular membrane redistribution, which seems to be independent of autophagic membrane degradation. Furthermore, we found that the gene knockdown of several pentose phosphate pathway-related genes causes the loss or abnormal formation of specific subsets of the intestinal granules including the non-acidic ones.

Report

(5 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (50 results)

All 2014 2013 2012 2011 2010 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (42 results) Remarks (4 results)

  • [Journal Article] Cooperative function and mutual stabilization of the half ATP-binding cassette transporters HAF-4 and HAF-9 in Caenorhabditis elegans.2013

    • Author(s)
      Tanji T, Nishikori K, Shiraishi H,Maeda M, Ohashi-Kobayashi A.
    • Journal Title

      Biochem. J.

      Volume: (in press) Issue: 3 Pages: 467-475

    • DOI

      10.1042/bj20130115

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cooperative function and mutual stabilization of the half ATP-binding cassette transporters HAF-4 and HAF-9 in Caenorhabditis elegans.2013

    • Author(s)
      Takahiro Tanji, et al.
    • Journal Title

      Biochem J.

      Volume: 452 Pages: 467-475

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Tissue and developmental expression of SRAM, an unconventional Rel-family protein.2011

    • Author(s)
      Shiraishi H, Tanji T, Natori S, Ohashi-Kobayashi A.
    • Journal Title

      Arch. Insect Biochem. Physiol

      Volume: 76 Issue: 1 Pages: 22-29

    • DOI

      10.1002/arch.20400

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Tissue and developmental expression of SRAM, an unconventional Rel-family protein.2011

    • Author(s)
      Hirohisa Shiraishi, et al.
    • Journal Title

      Arch.Insect.Biochem.Physiol.

      Volume: 76 Pages: 22-29

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] 飢餓および加齢に伴う線虫腸細胞内膜構造の動的変動の観察2014

    • Author(s)
      上川原 麻弥, 鈴木 成惇, 錦織 健児, 丹治 貴博, 松浦 絵里, 小笠原 勝利, 石田 欣二, 遠山 稿二郎, 白石 博久, 大橋 綾子
    • Organizer
      日本生化学会東北支部第80回例会・シンポジウム
    • Place of Presentation
      秋田
    • Year and Date
      2014-05-10
    • Related Report
      2013 Final Research Report
  • [Presentation] 線虫腸細胞で見出された新奇オルガネラ"HEBE顆粒"2013

    • Author(s)
      丹治 貴博, 錦織 健児, 白石 博久, 大橋 綾子
    • Organizer
      第52回日本薬学会東北支部大会
    • Place of Presentation
      仙台
    • Year and Date
      2013-10-20
    • Related Report
      2013 Final Research Report
  • [Presentation] 加齢や栄養環境に依存した線虫腸細胞オルガネラのポピュレーション変化2013

    • Author(s)
      高谷 麻衣, 立花 繭子, 官野 祐季, 丹治 貴博, 錦織 健児, 白石 博久, 大橋 綾子
    • Organizer
      第52回日本薬学会東北支部大会
    • Place of Presentation
      仙台
    • Year and Date
      2013-10-20
    • Related Report
      2013 Final Research Report
  • [Presentation] 線虫腸内に見られる顆粒状オルガネラの形成に関わる遺伝的要因の解析~V-ATPaseを構成する遺伝子の関与~2013

    • Author(s)
      高橋 怜衣, 西舘 佳祐, 錦織 健児, 丹治 貴博, 白石 博久, 大橋 綾子
    • Organizer
      第52回日本薬学会東北支部大会
    • Place of Presentation
      仙台
    • Year and Date
      2013-10-20
    • Related Report
      2013 Final Research Report
  • [Presentation] Classification of Caenorhabditis elegans intestinal granules using marker proteins2013

    • Author(s)
      Syoko Haga, Yusuke Kobayashi, Takahiro Tanji, Kenji Nishikori, Hirohisa Shiraishi, Ayako Ohashi-Kobayashi
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      横浜
    • Year and Date
      2013-09-13
    • Related Report
      2013 Final Research Report
  • [Presentation] Starvation-induced selective decrease of intestinal organelles in Caenorhabditis elegans2013

    • Author(s)
      Takahiro Tanji, Kenji Nishikori, Hirohisa Shiraishi, Ayako Ohashi-Kobayashi
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      横浜
    • Year and Date
      2013-09-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Age- associated replacement of the major C. elegans intestinal granules by fat storage organelles during adult stage2013

    • Author(s)
      Yuki Kanno, Yusuke Kobayashi, Hiroyuki Hayashi, Yuki Ueda, Takahiro Tanji, Kenji Nishikori, Hirohisa Shiraishi, Ayako Ohashi-Kobayashi
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      横浜
    • Year and Date
      2013-09-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Genetic requirements of the pentose phosphate pathway for the intestinal granule formation in C. elegans2013

    • Author(s)
      Hirohisa Shiraishi, Takato Oikawa, Maya Ishibashi, Mari Tanabe, Yumi Asanuma, Reiko Aoyama, Kenji Nishikori, Takahiro Tanji, Ayako Ohashi-Kobayashi
    • Organizer
      19th International C. elegans Meeting
    • Place of Presentation
      米国カリフォルニア州ロサンゼルス
    • Year and Date
      2013-06-28
    • Related Report
      2013 Final Research Report
  • [Presentation] The discovery of intestinal intracellular microbes in the soil nematode collected from the field of the Tohoku district, northeastern Japan2013

    • Author(s)
      Kenji Nishikori, Eisuke Kuroda, Takahiro Tanji, Hirohisa Shiraishi, Ayako Ohashi-Kobayashi
    • Organizer
      19th International C. elegans Meeting
    • Place of Presentation
      米国カリフォルニア州ロサンゼルス
    • Year and Date
      2013-06-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Exploration and analysis of genetic factors involved in the formation of intestinal granules in C. elegans via RNAi method2013

    • Author(s)
      Maya Ishibashi, Shohei Tashiro, Mari Tanabe, Yumi Asanuma, Takato Oikawa, Kenji Nishikori, Takahiro Tanji, Hirohisa Shiraishi, Ayako Ohashi-Kobayashi
    • Organizer
      FAOBMB Mini Symposium 2013
    • Place of Presentation
      矢巾
    • Year and Date
      2013-04-06
    • Related Report
      2013 Final Research Report
  • [Presentation] Study on nutrient component required for the formation and maintenance of intestinal granules in C. elegans2013

    • Author(s)
      Mio Asanuma, Eisuke Kuroda, Takahiro Tanji, Kenji Nishikori, Hirohisa, Shiraishi, Ayako Ohashi-Kobayashi
    • Organizer
      FAOBMB Mini Symposium 2013
    • Place of Presentation
      矢巾
    • Year and Date
      2013-04-06
    • Related Report
      2013 Final Research Report
  • [Presentation] Monitoring of age-dependent alteration of C. elegans intestinal granules by organelle staining dyes and marker proteins2013

    • Author(s)
      Yusuke Kobayashi, Hiroyuki Hayashi, Yuki Ueda, Yuki Kanno, Syoko Haga,Kenji Nishikori, Takahiro Tanji, Hirohisa Shiraishi, Ayako Ohashi-Kobayashi
    • Organizer
      FAOBMB Mini Symposium 2013
    • Place of Presentation
      矢巾
    • Year and Date
      2013-04-06
    • Related Report
      2013 Final Research Report
  • [Presentation] 線虫腸細胞に存在するABC輸送体HAF-4・HAF-9陽性オルガネラの栄養環境に依存した変動2013

    • Author(s)
      黒田 英介, 丹治 貴博, 錦織 健児, 浅沼 美音, 白石 博久, 大橋 綾子
    • Organizer
      日本薬学会第133年会
    • Place of Presentation
      横浜
    • Year and Date
      2013-03-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Genetic requirements of the pentose phosphate pathway for the intestinal granule formation in C. elegans2013

    • Author(s)
      Hirohisa Shiraishi, et al.
    • Organizer
      19th International C. elegans Meeting
    • Place of Presentation
      Los Angeles, California, USA
    • Related Report
      2012 Annual Research Report
  • [Presentation] The discovery of intestinal intracellular microbes in the soil nematode collected from the field of the Tohoku district, northeastern Japan2013

    • Author(s)
      Kenji Nishikori, et al.
    • Organizer
      19th International C. elegans Meeting
    • Place of Presentation
      Los Angeles, California, USA
    • Related Report
      2012 Annual Research Report
  • [Presentation] Identification of proteins affected by the deletion for haf-4 and haf-9 , the intestinal ABC transporter genes in Caenorhabditis elegans2012

    • Author(s)
      Kenji Nishikori, Takahiro Tanji, Hirohisa Shiraishi, Ayako Ohashi- Kobayashi
    • Organizer
      New Frontiers of Metabolism Research in Biomedical Sciences
    • Place of Presentation
      東京
    • Year and Date
      2012-09-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Dynamic changes of major large intestinal granules in response to aging and starvation in Caenorhabditis elegans2012

    • Author(s)
      Hirohisa Shiraishi, Kenji Nishikori, Yuki Ueda, Eisuke Kuroda, Hiroyuki Hayashi,Takahiro Tanji, Ayako Ohashi-Kobayashi
    • Organizer
      New Frontiers of Metabolism Research in Biomedical Sciences
    • Place of Presentation
      東京
    • Year and Date
      2012-09-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Age- and nutrition-dependent changes of intestinal granules in C.elegans加齢および栄養状態に依存した線虫腸内顆粒の変動2012

    • Author(s)
      丹治貴博, 他
    • Organizer
      第6回先端医療薬学研究センター講演会
    • Place of Presentation
      岩手伊医科大学矢巾キャンパス(矢巾)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Proteomic and genetic approaches to the mechanisms underlying the formation of intestinal granules in C.elegansプロテオミクス及び遺伝学的アプローチによる線虫腸内顆粒の形成機構の解析2012

    • Author(s)
      錦織健児, 他
    • Organizer
      第6回先端医療薬学研究センター講演会
    • Place of Presentation
      矢巾
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Age-dependent alteration of major large intestinal granules in Caenorhabditis elegans2012

    • Author(s)
      Kenji Nishikori, Takahiro Tanji, Eisuke Kuroda, Yuki Ueda, Hirohisa Shiraishi, Ayako Ohashi-Kobayashi
    • Organizer
      Aging, Metabolism, Stress, Pathogenesis, and Small RNAs in C. elegans Topic Meeting 2012
    • Place of Presentation
      米国ウィスコンシン州マディソン
    • Related Report
      2013 Final Research Report
  • [Presentation] Age-dependent alteration of major large intestinal granules in Caenorhabditis elegans.2012

    • Author(s)
      Ayako Ohashi-Kobayashi, et al.
    • Organizer
      Aging, Metabolism, Stress, Pathogenesis, and Small RNAs in C. elegans Topic Meeting
    • Place of Presentation
      Madison, Wisconsin, USA
    • Related Report
      2012 Annual Research Report
  • [Presentation] Physical interaction of half ABC transporters HAF-4 and HAF-9, which are required for the biogenesis of the intestinal lysosome-related organelles in Caenorhabditis elegans.2012

    • Author(s)
      Takahiro Tanji, et al.
    • Organizer
      Aging, Metabolism, Stress, Pathogenesis, and Small RNAs in C. elegans Topic Meeting
    • Place of Presentation
      Madison, Wisconsin, USA
    • Related Report
      2012 Annual Research Report
  • [Presentation] Age-associated renewal of intestinal granules in C. elegans during adulthood, 成虫期の線虫では加齢に伴った腸内顆粒のリニューアルが起こる2011

    • Author(s)
      錦織健児, 丹治貴博, 白石博久, 大橋綾子
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2013 Final Research Report
  • [Presentation] Age-associated renewal of intestinal granules in C.elegans during adulthood2011

    • Author(s)
      錦織健児, 他
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(横浜)
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] Mutual stabilization of half-type ABC transporters HAF-4 and HAF-9 in Caenorhabditis elegans2011

    • Author(s)
      丹治 貴博, 白石 博久, 錦織 健児, 大橋 綾 子
    • Organizer
      第84回日本生化学会年会
    • Place of Presentation
      京都
    • Year and Date
      2011-09-22
    • Related Report
      2013 Final Research Report
  • [Presentation] Mutual stabilization of half-type ABC transporters HAF-4 and HAF-9 in Caenorhabditis elegans2011

    • Author(s)
      Takahiro Tanji, et al
    • Organizer
      第84回日本生化学会年会
    • Place of Presentation
      京都国際会議場(京都)
    • Year and Date
      2011-09-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] プロテオミクスによる線虫(C.elegans)リソソーム関連ABC輸送体(HAF-4,HAF-9)の生理機能の解析2011

    • Author(s)
      錦織健児, 他
    • Organizer
      第6回トランスポーター研究会年会
    • Place of Presentation
      東北大学(仙台)
    • Year and Date
      2011-06-11
    • Related Report
      2011 Annual Research Report
  • [Presentation] Genetic and physical interactions between half-type ABC transporters HAF-4 and HAF-9, which are required for the biogenesis of intestinal lysosome-related organelle in Caenorhabditis elegans2010

    • Author(s)
      Takahiro Tanji, Hirohisa Shiraishi, Kenji Nishikori, Ayako Ohashi-Kobayashi
    • Organizer
      BMB2010 (第33回日本分子生物学会年会・第83回日本生化学会大会合同学会)
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-09
    • Related Report
      2013 Final Research Report
  • [Presentation] Genetic and physical interactions between half-type ABC transporters HAF-4 and HAF-9, which are required for the biogenesis of intestinal lysosome-related organelle in Caenorhabditis elegans.2010

    • Author(s)
      Takahiro Tanji, et al.
    • Organizer
      BMB2010(第33回日本分子生物学会年会・第83回日本生化学会大会合同学会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Year and Date
      2010-12-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] Changes of protein profiles in the deletion mutant for haf-4 and haf-9, the intestinal ABC transporter genes in C.elegans.2010

    • Author(s)
      Kenji Nishikori, et al.
    • Organizer
      BMB2010(第33回日本分子生物学会年会・第83回日本生化学会大会合同学会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Year and Date
      2010-12-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] Characterization of HAF-2 as a lysosomal ABC transporter in Caenorhabditis elegans2010

    • Author(s)
      Hirohisa Shiraishi, Kenji Nishikori, Takahiro Tanji, Ayako Ohashi-Kobayashi
    • Organizer
      4th East Asia C. elegans Meeting
    • Place of Presentation
      東京
    • Year and Date
      2010-07-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Characterization of HAF-2 as a lysosomal ABC transporter in Caenorhabditis elegans.2010

    • Author(s)
      Hirohisa Shiraishi, et al.
    • Organizer
      4th East Asia C.elegans Meeting
    • Place of Presentation
      国立オリンピック記念青少年総合センター(東京都)
    • Year and Date
      2010-07-12
    • Related Report
      2010 Annual Research Report
  • [Presentation] Genetic interaction of HAF-4 and HAF-9, half-type ABC transporters required for the biogenesis of intestinal lysosome-related organelle in Caenorhabditis elegans.2010

    • Author(s)
      Takahiro Tanji, et al.
    • Organizer
      4th East Asia C.elegans Meeting
    • Place of Presentation
      国立オリンピック記念青少年総合センター(東京都)
    • Year and Date
      2010-07-12
    • Related Report
      2010 Annual Research Report
  • [Presentation] ATP-binding casette transporters HAF-4 and HAF-9, homologues of human lysosomal peptide transporter TAP-like are required for biogenesis of a subset of intestinal granules in Caenorhabditis elegans.2010

    • Author(s)
      Kenji Nishikori, et al.
    • Organizer
      4th East Asia C.elegans Meeting
    • Place of Presentation
      国立オリンピック記念青少年総合センター(東京都)
    • Year and Date
      2010-07-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] 飢餓および加齢に伴う線虫腸細胞内膜構造の動的変動の観察

    • Author(s)
      上川原麻弥、鈴木成惇、錦織健児、丹治貴博、松浦絵里、小笠原勝利、石田欣二、遠山稿二郎、白石博久、大橋綾子
    • Organizer
      日本生化学会東北支部 第80回例会・シンポジウム
    • Place of Presentation
      秋田
    • Related Report
      2013 Annual Research Report
  • [Presentation] 線虫腸細胞で見出された新奇オルガネラ“HEBE顆粒”

    • Author(s)
      丹治貴博、錦織健児、白石博久、大橋綾子
    • Organizer
      第52回日本薬学会東北支部大会
    • Place of Presentation
      仙台
    • Related Report
      2013 Annual Research Report
  • [Presentation] Genetic requirements of the pentose phosphate pathway for the intestinal granule formation in C. elegans.

    • Author(s)
      Hirohisa Shiraishi, Takato Oikawa, Maya Ishibashi, Mari Tanabe, Yumi Asanuma, Reiko Aoyama, Kenji Nishikori, Takahiro Tanji, Ayako Ohashi-Kobayashi.
    • Organizer
      19th International C. elegans Meeting
    • Place of Presentation
      ロサンゼルス
    • Related Report
      2013 Annual Research Report
  • [Presentation] Exploration and analysis of genetic factors involved in the formation of intestinal granules in C. elegans via RNAi method.

    • Author(s)
      Maya Ishibashi, Shohei Tashiro, Mari Tanabe, Yumi Asanuma, Takato Oikawa,Kenji Nishikori, Takahiro Tanji, Hirohisa Shiraishi, Ayako Ohashi–Kobayashi
    • Organizer
      FAOBMB Mini Symposium 2013
    • Place of Presentation
      矢巾
    • Related Report
      2013 Annual Research Report
  • [Presentation] 線虫の腸細胞オルガネラに局在するABC輸送体HAF-4とHAF-9の多量体形成と相互安定化

    • Author(s)
      丹治貴博, et al.
    • Organizer
      日本薬学会第133年会
    • Place of Presentation
      横浜
    • Related Report
      2012 Annual Research Report
  • [Presentation] 線虫腸細胞に存在するABC輸送体HAF-4・HAF-9陽性オルガネラの栄養環境に依存した変動

    • Author(s)
      黒田英介, et al.
    • Organizer
      日本薬学会第133年会
    • Place of Presentation
      横浜
    • Related Report
      2012 Annual Research Report
  • [Presentation] Identification of proteins affected by the deletion for haf-4 and haf-9, the intestinal ABC transporter genes in Caenorhabditis elegans.

    • Author(s)
      Kenji Nishikori, et al.
    • Organizer
      New Frontiers of Metabolism Research in Biomedical Sciences
    • Place of Presentation
      東京
    • Related Report
      2012 Annual Research Report
  • [Presentation] Dynamic changes of major large intestinal granules in response to aging and starvation in Caenorhabditis elegans.

    • Author(s)
      Hirohisa Shiraishi, et al.
    • Organizer
      New Frontiers of Metabolism Research in Biomedical Sciences
    • Place of Presentation
      東京
    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://gaia-sb.iwate-med.ac.jp/pharm/?page_id=42

    • Related Report
      2013 Final Research Report
  • [Remarks] 岩手医科大学薬学部生体防御学講座HP

    • URL

      http://gaia-sb.iwate-med.ac.jp/pharm/?page_id=42

    • Related Report
      2013 Annual Research Report
  • [Remarks] 所属講座の業績発表リスト

    • URL

      http://gaia-sb.iwate-med.ac.jp/pharm/?page_id=133

    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://gaia-sb.iwate-med.ac.jp/pharm/?page_id=42

    • Related Report
      2011 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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