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Structural basis for the indirect aminoacyl-tRNA synthesis pathway from H. pyroli

Research Project

Project/Area Number 22870001
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionHokkaido University

Principal Investigator

NAKAMURA Akiyoshi  北海道大学, 大学院・先端生命科学研究院, 博士研究員 (10583891)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,146,000 (Direct Cost: ¥2,420,000、Indirect Cost: ¥726,000)
Fiscal Year 2011: ¥1,508,000 (Direct Cost: ¥1,160,000、Indirect Cost: ¥348,000)
Fiscal Year 2010: ¥1,638,000 (Direct Cost: ¥1,260,000、Indirect Cost: ¥378,000)
KeywordsアミノアシルtRNA合成酵素 / tRNA / X線結晶構造
Research Abstract

We have been focusing on the structural and functional analysis of GatCAB, which has an important role in an indirect pathway of aminoacyl-tRNA synthesis. We have determined the crystal structure of an archaeal GatCAB at 2. 5 A resolution. The structural comparison of the archaeal GatCAB and the bacterial GatCAB suggested that a 3_<10> helix in the bacterial GatCAB is crucial for recognition the U1-A72 pair in tRNA^<Gln>, and the absence of the helix in the archaeal GatCAB enables the enzyme recognize aa-tRNA with G1-C72 base-pairs.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (7 results)

All 2012 2010 Other

All Presentation (6 results) Remarks (1 results)

  • [Presentation] Structural and Functional analysis of GatCAB2012

    • Author(s)
      Akiyoshi Nakamura
    • Organizer
      Sapporo Symposium on Advanced Protein Crystallography
    • Place of Presentation
      北海道大学(札幌市)(招待講演)
    • Year and Date
      2012-03-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Asn-tRNA (Asn) synthesis in a Bacterial Transamidosome2012

    • Author(s)
      Tateki Suzuki, Akiyoshi Nakamura, Min Yao, Isao Tanaka
    • Organizer
      Sapporo Symposium on Advanced Protein Crystallography
    • Place of Presentation
      北海道大学(札幌市)
    • Year and Date
      2012-03-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Structural and Functional analysis of GatCAB Sapporo2012

    • Author(s)
      Akiyoshi Nakamura
    • Place of Presentation
      北海道大学(札幌市)
    • Related Report
      2011 Final Research Report
  • [Presentation] Asn-tRNA(Asn) synthesis in a Bacterial Transamidosome2012

    • Author(s)
      Tateki Suzuki, Akiyoshi Nakamura, Min Yao, and Isao Tanaka
    • Organizer
      Sapporo Symposium on Advanced Protein Crystallography
    • Place of Presentation
      北海道大学(札幌市)
    • Related Report
      2011 Final Research Report
  • [Presentation] 真正細菌型GatCABと古細菌型GatCABの構造比較2010

    • Author(s)
      中村彰良・周倩・朝野希美・姚閔・田中勲
    • Organizer
      第12回日本RNA学会年会
    • Place of Presentation
      一橋記念講堂(東京都)
    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Presentation] 古細菌型GatCABと真正細菌型GatCABの比較2010

    • Author(s)
      周倩・中村彰良・朝野希美・姚閔・田中勲
    • Organizer
      第60回日本結晶学会年会
    • Place of Presentation
      大阪大学コンベンションセンター(大阪府)
    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Remarks]

    • URL

      http://altair.sci.hokudai.ac.jp/g6/index.html

    • Related Report
      2011 Final Research Report

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Published: 2010-08-27   Modified: 2016-04-21  

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