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Spatiotemporal metabolomics analysis in the human cornea-on-a-chip for the determination of ocular drug toxicity

Research Project

Project/Area Number 22K14548
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 27040:Biofunction and bioprocess engineering-related
Research InstitutionRitsumeikan University

Principal Investigator

ABDALKADER Rodi  立命館大学, 立命館グローバル・イノベーション研究機構, 准教授 (20839964)

Project Period (FY) 2022-04-01 – 2025-03-31
Project Status Completed (Fiscal Year 2024)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2023: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2022: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordshuman cornea-on-a-chip / metabolomics / drug toxicity / untargeted metabolomic / cornea-on-a-chip / Cornea-on-a-chip / Microfluidic / Metabolomic / Drug toxicity / iPSC
Outline of Research at the Start

This proposal aims for the development of a dynamic human cornea model in integration with untargeted metabolomics by combining human induced pluripotent stem cells (iPSC), microfluidics technologies, and metabolomics. This approach will allow us to investigate the early toxicity of the ophthalmic drugs through the selection of significant metabolites markers upon drugs exposure.

Outline of Final Research Achievements

In this research study we developed a human corneal epithelium-on-a-chip (CEpOC) in order to model eye disease and to investigate metabolite marker discovery using untargeted metabolomics. Under conditions such as evaporative dry eye, and non-steroidal anti-inflammation drug, diclofenac (DCF). RNA sequencing showed the up-regulation of inflammatory genes such as IL-6, CXCL2 and CCL5. Untargeted LC-MS analysis revealed elevated levels of acylcarnitines and other toxic metabolites (metabotoxins) indicative of mitochondrial stress. This showed that the CEpOC platform can sensitively detect drug-induced molecular alterations and metabolic changes and has value as a potential predictive type of formulation to screen for drug toxicity in the ophthalmic safety studies.

Academic Significance and Societal Importance of the Research Achievements

本研究で開発したヒト角膜上皮オンチップ(CEpOC)は、蒸発型ドライアイ環境と薬剤応答を模倣できる高度なin vitroモデルである。RNA-seqと非標的メタボロミクス解析を組み合わせることで、薬剤毒性の早期検出と機序解明が可能となった。本成果は、動物実験に依存しない評価系として3Rs(Replacement, Reduction, Refinement)に貢献し、前臨床段階における安全性評価の精度向上とコスト削減に寄与する。今後、眼科薬開発の促進と高齢化社会における視機能維持、QOL向上への貢献が期待される。

Report

(4 results)
  • 2024 Annual Research Report   Final Research Report ( PDF )
  • 2023 Research-status Report
  • 2022 Research-status Report
  • Research Products

    (19 results)

All 2025 2024 2023 2022 Other

All Int'l Joint Research (1 results) Journal Article (5 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 4 results,  Open Access: 3 results) Presentation (9 results) (of which Int'l Joint Research: 3 results,  Invited: 5 results) Remarks (3 results) Patent(Industrial Property Rights) (1 results)

  • [Int'l Joint Research] University of British Columbia (UBC)(カナダ)

    • Related Report
      2024 Annual Research Report
  • [Journal Article] Development of a flexible 3D printed TPU-PVC microfluidic devices for organ-on-a-chip applications2025

    • Author(s)
      Kado Abdalkader Rodi、Konishi Satoshi、Fujita Takuya
    • Journal Title

      Scientific Reports

      Volume: 15 Issue: 1 Pages: 612-612

    • DOI

      10.1038/s41598-025-90470-w

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Development and characterization of bioinks for 3D bioprinting of in vitro skeletal muscle constructs2025

    • Author(s)
      Kado Abdalkader Rodi、Yamauchi Kosei、Konishi Satoshi、Fujita Takuya
    • Journal Title

      Bioprinting

      Volume: 46 Pages: e00396-e00396

    • DOI

      10.1016/j.bprint.2025.e00396

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Modeling dry eye with an air liquid interface in corneal epithelium-on-a-chip2024

    • Author(s)
      Kado Abdalkader Rodi、Chaleckis Romanas、Fujita Takuya、Kamei Ken-ichiro
    • Journal Title

      Scientific Reports

      Volume: 14 Issue: 1 Pages: 4185-4185

    • DOI

      10.1038/s41598-024-54736-z

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Corneal epithelium models for safety assessment in drug development: Present and future directions2023

    • Author(s)
      Rodi Kado Abdalkader, Takuya Fujita
    • Journal Title

      Experimental Eye Research

      Volume: 237 Pages: 109697-109697

    • DOI

      10.1016/j.exer.2023.109697

    • Related Report
      2023 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Early Differentiation Signatures in Human Induced Pluripotent Stem Cells Determined by Non-Targeted Metabolomics Analysis2023

    • Author(s)
      Abdalkader Rodi、Chaleckis Romanas、Fujita Takuya
    • Journal Title

      bioRxiv

      Volume: -

    • DOI

      10.1101/2023.03.02.530741

    • Related Report
      2022 Research-status Report
  • [Presentation] Integrating 3D Bioprinting and Organ-on-a-Chip Technologies for Drug Development Applications2025

    • Author(s)
      Rodi Kado Abdalkader
    • Organizer
      18th University of British Columbia (UBC) and Ritsumeikan University Joint Symposium
    • Related Report
      2024 Annual Research Report
    • Invited
  • [Presentation] Development of a multi-lineage human iPSC-derived organoid assembling eye, brain, and muscle cells2024

    • Author(s)
      Rodi Kado Abdalkader
    • Organizer
      SSCR 2024 Singapore International Symposium. SINGAPORE
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The Development of Corneal epithelium-on-a-Chip for Drug Development and Disease Modeling2024

    • Author(s)
      Rodi Kado Abdalkader
    • Organizer
      19th IEEE International Conference on Nao/Micro Engineered and Molecular Systems (IEEE-NEMS 2024)
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Microphysiological systems: Advancements and applications in pharmaceutical research2024

    • Author(s)
      Rodi Kado Abdalkader
    • Organizer
      APSTJ (The Academy of Pharmaceutical Science and Technology, JAPAN) education seminar
    • Related Report
      2023 Research-status Report
    • Invited
  • [Presentation] Microphysiological systems and human pluripotent stem cells: An innovative tool for drug development and disease modeling2024

    • Author(s)
      Rodi Kado Abdalkader
    • Organizer
      The 31st next generation biomedical research workshop
    • Related Report
      2023 Research-status Report
    • Invited
  • [Presentation] The development of a micro physiological system of the human corneal epithelium under dry eye-like conditions2023

    • Author(s)
      Rodi Abdalkader, Ken-Ichiro Kamei, Takuya Fujita
    • Organizer
      The Japanese Society for the Study of Xenobiotics (JSSX)
    • Related Report
      2023 Research-status Report
  • [Presentation] RNA sequencing analysis reveals diclofenac-induced changes in gene expression in a dry eye biomimetic model2023

    • Author(s)
      Rodi Abdalkader, Ken-Ichiro Kamei, Takuya Fujita
    • Organizer
      Japanese Society of Toxicology (JSOT)
    • Related Report
      2023 Research-status Report
  • [Presentation] The survival and characteristics of cryopreserved human iPSC-derived corneal epithelial cells generated by SSM-CI method2022

    • Author(s)
      Rodi ABDALKADER
    • Organizer
      World Ophthalmology Congress of the International Council of Ophthalmology (WOC)
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Presentation] ヒト角膜・オン・チップの開発2022

    • Author(s)
      Rodi ABDALKADER
    • Organizer
      第9回大学発シーズ マッチングセミナー」~AgeTech (長寿社会×テクノロジー)特集
    • Related Report
      2022 Research-status Report
    • Invited
  • [Remarks] Website for research activities

    • URL

      https://rodialkader.wixsite.com/rodi-abdalkader

    • Related Report
      2024 Annual Research Report
  • [Remarks] Website

    • URL

      https://rodialkader.wixsite.com/rodi-abdalkader

    • Related Report
      2023 Research-status Report
  • [Remarks] Personal Website

    • URL

      https://rodialkader.wixsite.com/rodi-abdalkader

    • Related Report
      2022 Research-status Report
  • [Patent(Industrial Property Rights)] 多系統オルガノイドの製造方法2024

    • Inventor(s)
      加堂(アブドアル カーディル) ロディ
    • Industrial Property Rights Holder
      立命館大学
    • Industrial Property Rights Type
      特許
    • Filing Date
      2024
    • Acquisition Date
      2024
    • Related Report
      2024 Annual Research Report

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Published: 2022-04-19   Modified: 2026-01-16  

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