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Establishment of real-time measurement technique for ATP concentration and amount in single hematopoietic stem cells

Research Project

Project/Area Number 22K19550
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Review Section Medium-sized Section 54:Internal medicine of the bio-information integration and related fields
Research InstitutionNational Center for Global Health and Medicine

Principal Investigator

Takubo Keiyo  国立研究開発法人国立国際医療研究センター, 研究所, 生体恒常性プロジェクト長 (50502788)

Project Period (FY) 2022-06-30 – 2024-03-31
Project Status Completed (Fiscal Year 2023)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2023: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2022: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Keywords造血幹細胞 / 骨髄 / 幹細胞ニッチ / 幹細胞代謝 / 解糖系 / 単一細胞解析 / 定量生物学 / リアルタイムATP濃度解析 / 代謝リプログラミング
Outline of Research at the Start

本研究では造血幹細胞の単一細胞リアルタイムATP濃度リアルタイム解析技術を確立することを目的として、安定して体外で血液細胞のATP濃度を測定する条件を確立し、蛍光輝度の変化から単一細胞のATP濃度を定量する方法論を用意する。さらに、細胞の体積を同時測定する手法を準備して、そのうえでATP量の測定も実施する。これらを通じて造血幹細胞のATP濃度・量と細胞動態・運命との関連を解き明かすための基盤となる技術を創出する。

Outline of Final Research Achievements

This study established a technique to measure ATP concentrations at the single cell level of hematopoietic stem cells in real time using an ATP biosensor. We then used these technologies to analyze in detail how fluctuations in ATP concentration affect stem cell fate determination and cellular dynamics. We found that when HSCs are exposed to acute stress, the source of ATP production rapidly activates the anaerobic glycolytic system. Specifically, they found that under proliferative stress, arginine methyltransferase PRMT1 methylates PFKFB3, and under mitochondrial stress, AMPK phosphorylates PFKFB3 to activate the glycolytic system.

Academic Significance and Societal Importance of the Research Achievements

本研究の学術的意義は、造血幹細胞のATP濃度をリアルタイムで測定する新たな技術を確立し、代謝と幹細胞性の関係を明らかにした点にある。特に、急性ストレスがATP産生経路に与える影響を分子レベルで解明することで、代謝の可塑性が幹細胞の運命決定に果たす役割を示した。社会的意義としては、血液疾患や再生医療の分野において、造血幹細胞の代謝制御が新たな治療法の開発につながる可能性を示唆している。また、本研究で確立された技術は、他の細胞種の代謝研究にも応用可能であり、広範な生物医学研究の基盤技術として社会に貢献することが見込まれる。

Report

(3 results)
  • 2023 Annual Research Report   Final Research Report ( PDF )
  • 2022 Research-status Report
  • Research Products

    (31 results)

All 2024 2023 2022 Other

All Journal Article (13 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 13 results,  Open Access: 12 results) Presentation (17 results) (of which Int'l Joint Research: 1 results,  Invited: 6 results) Remarks (1 results)

  • [Journal Article] Imeglimin improves systemic metabolism by targeting brown adipose tissue and gut microbiota in obese model mice.2024

    • Author(s)
      Awazawa M, Matsushita M, Nomura I, Kobayashi N, Tamura-Nakano M, Sorimachi Y, Takubo K, Ueki K.
    • Journal Title

      Metabolism

      Volume: 153 Pages: 155796-155796

    • DOI

      10.1016/j.metabol.2024.155796

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Abcb10 regulates murine hematopoietic stem cell potential and erythroid differentiation2024

    • Author(s)
      Yahagi Ayano、Mochizuki-Kashio Makiko、Sorimachi Yuriko、Takubo Keiyo、Nakamura-Ishizu Ayako
    • Journal Title

      Experimental Hematology

      Volume: - Pages: 104191-104191

    • DOI

      10.1016/j.exphem.2024.104191

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Context-dependent modification of PFKFB3 in hematopoietic stem cells promotes anaerobic glycolysis and ensures stress hematopoiesis2024

    • Author(s)
      Watanuki S et al
    • Journal Title

      eLife

      Volume: 12

    • DOI

      10.7554/elife.87674

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Mesenchymal loss of p53 alters stem cell capacity and models human soft tissue sarcoma traits.2023

    • Author(s)
      Sorimachi Y, Kobayashi H, Shiozawa Y, Koide S, Nakato R, Shimizu Y, Okamura T, Shirahige K, Iwama A, Goda N, Takubo K, Takubo K.
    • Journal Title

      Stem Cell Reports

      Volume: S2213-6711(23) Issue: 5 Pages: 00097-8

    • DOI

      10.1016/j.stemcr.2023.03.009

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Evaluating the function of murine quiescent hematopoietic stem cells following non-homologous end joining-based genome editing2023

    • Author(s)
      Shiroshita Kohei、Kobayashi Hiroshi、Takubo Keiyo
    • Journal Title

      STAR Protocols

      Volume: 4 Issue: 2 Pages: 102347-102347

    • DOI

      10.1016/j.xpro.2023.102347

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Distinct roles of the preparatory and payoff phases of glycolysis in hematopoietic stem cells2023

    • Author(s)
      Shiroshita Kohei、Kobayashi Hiroshi、Takubo Keiyo
    • Journal Title

      Experimental Hematology

      Volume: 124 Pages: 56-67

    • DOI

      10.1016/j.exphem.2023.06.003

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MBTD1 preserves adult hematopoietic stem cell pool size and function2023

    • Author(s)
      Takubo Keiyo、Htun Phyo Wai、Ueda Takeshi、Sera Yasuyuki、Iwasaki Masayuki、Koizumi Miho、Shiroshita Kohei、Kobayashi Hiroshi、Haraguchi Miho、Watanuki Shintaro、Honda Zen-ichiro、Yamasaki Norimasa、Nakamura-Ishizu Ayako、Arai Fumio、Motoyama Noboru、Hatta Tomohisa、Natsume Tohru、Suda Toshio、Honda Hiroaki
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 120 Issue: 32

    • DOI

      10.1073/pnas.2206860120

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Spatial heterogeneity of bone marrow endothelial cells unveils a distinct subtype in the epiphysis2023

    • Author(s)
      Iga Takahito、Kobayashi Hiroshi、Kusumoto Dai、Sanosaka Tsukasa、Fujita Nobuyuki、Tai-Nagara Ikue、Ando Tomofumi、Takahashi Tomoko et.al
    • Journal Title

      Nature Cell Biology

      Volume: 25 Issue: 10 Pages: 1415-1425

    • DOI

      10.1038/s41556-023-01240-7

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Potential Involvement of Oxidative Stress in Ligamentum Flavum Hypertrophy2023

    • Author(s)
      Ito K, Kise H, Suzuki S, Nagai S, Hachiya K, Takeda H, Kawabata S, Ikeda D, Takubo K, Kaneko S, Fujita N.
    • Journal Title

      J Clin Med

      Volume: 12 Issue: 3 Pages: 808-808

    • DOI

      10.3390/jcm12030808

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quantitative Analysis of Sympathetic and Nociceptive Innervation Across Bone Marrow Regions in Mice2022

    • Author(s)
      Fujita Shinya、Morikawa Takayuki、Tamaki Shinpei、Sezaki Maiko、Takizawa Hitoshi、Okamoto Shinichiro、Kataoka Keisuke、Takubo Keiyo
    • Journal Title

      Experimental Hematology

      Volume: 112-113 Pages: 44-59

    • DOI

      10.1016/j.exphem.2022.07.297

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Approaches towards Elucidating the Metabolic Program of Hematopoietic Stem/Progenitor Cells2022

    • Author(s)
      Kobayashi Hiroshi、Watanuki Shintaro、Takubo Keiyo
    • Journal Title

      Cells

      Volume: 11 Issue: 20 Pages: 3189-3189

    • DOI

      10.3390/cells11203189

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] RNaseH2A downregulation drives inflammatory gene expression via genomic DNA fragmentation in senescent and cancer cells2022

    • Author(s)
      Sugawara S, Okada R, Loo TM, Tanaka H, Miyata K, Chiba M, Kawasaki H, Katoh K, Kaji S, Maezawa Y, Yokote K, Nakayama M, Oshima M, Nagao K, Obuse C, Nagayama S, Takubo K, Nakanishi A, Kanemaki MT, Hara E, Takahashi A.
    • Journal Title

      Commun Biol

      Volume: 5 Issue: 1 Pages: 1420-1420

    • DOI

      10.1038/s42003-022-04369-7

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A culture platform to study quiescent hematopoietic stem cells following genome editing2022

    • Author(s)
      Shiroshita Kohei、Kobayashi Hiroshi、Watanuki Shintaro、Karigane Daiki、Sorimachi Yuriko、Fujita Shinya、Tamaki Shinpei、Haraguchi Miho、Itokawa Naoki、Aoyama Kazumasa、Koide Shuhei、Masamoto Yosuke、Kobayashi Kenta、Nakamura-Ishizu Ayako、Kurokawa Mineo、Iwama Atsushi、Okamoto Shinichiro、Kataoka Keisuke、Takubo Keiyo
    • Journal Title

      Cell Reports Methods

      Volume: 2 Issue: 12 Pages: 100354-100354

    • DOI

      10.1016/j.crmeth.2022.100354

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] The Pbx1-G9a axis dysregulates lineage output of aged hematopoietic stem cells2023

    • Author(s)
      Hiroshi Kobayashi, Shintaro Watanuki, Yusuke Shiozawa, Naoya Takayama, Seishi Ogawa, Atsushi Iwama, Keiyo Takubo
    • Organizer
      第20回幹細胞シンポジウム
    • Related Report
      2023 Annual Research Report
  • [Presentation] Nociceptive nerves facilitate hematopoietic stem and progenitor cell homing to bone marrow by regulating microcirculation2023

    • Author(s)
      Shinya Fujita, Takayuki Morikawa, Keisuke Kataoka, Keiyo Takubo
    • Organizer
      第20回幹細胞シンポジウム
    • Related Report
      2023 Annual Research Report
  • [Presentation] 間葉系幹細胞特異的p53欠損は幹細胞特性を変化させて未分化軟部肉腫を発症する2023

    • Author(s)
      反町優理子, 小林央, 合田亘人, 田久保圭誉
    • Organizer
      癌と代謝研究会2023
    • Related Report
      2023 Annual Research Report
  • [Presentation] 侵害受容神経は骨髄微小循環を制御し造血幹前駆細胞のホーミングを促す2023

    • Author(s)
      藤田進也, 森川隆之, 片岡圭亮, 田久保圭誉
    • Organizer
      低酸素研究会2023
    • Related Report
      2023 Annual Research Report
  • [Presentation] 加齢造血幹細胞の「強さ」を支える代謝リプログラミング2023

    • Author(s)
      田久保圭誉
    • Organizer
      実験動物中央研究所特別セミナー
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] 骨髄環境のイメージング2023

    • Author(s)
      田久保圭誉
    • Organizer
      第85回日本血液学会学術集会
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] 神経伝達物質による造血幹細胞のホーミング制御2023

    • Author(s)
      田久保圭誉
    • Organizer
      第4回血液疾患領域Web研究会
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] 侵害受容神経による造血幹・前駆細胞のホーミング制御2023

    • Author(s)
      田久保圭誉
    • Organizer
      日本再生医療学会第3回科学シンポジウム
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] 骨髄の微小循環と造血幹細胞のエイジング2023

    • Author(s)
      小林央, 田久保圭誉
    • Organizer
      第46回日本分子生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 神経シグナルによる造血幹・前駆細胞のホーミング制御2023

    • Author(s)
      田久保圭誉
    • Organizer
      第22回日本再生医療学会総会
    • Related Report
      2022 Research-status Report
    • Invited
  • [Presentation] 造血幹細胞のATP濃度制御とエイジング2022

    • Author(s)
      田久保 圭誉
    • Organizer
      第8回がんと代謝研究会
    • Related Report
      2022 Research-status Report
    • Invited
  • [Presentation] 造血幹細胞のPFKFB3依存的解糖系流量調節2022

    • Author(s)
      綿貫慎太郎、小林央、田久保圭誉
    • Organizer
      第8回がんと代謝研究会
    • Related Report
      2022 Research-status Report
  • [Presentation] PFKFB3はストレス毎に異なる修飾を介して造血幹細胞機能を維持する2022

    • Author(s)
      綿貫慎太郎、小林央、田久保圭誉
    • Organizer
      低酸素研究会2022
    • Related Report
      2022 Research-status Report
  • [Presentation] Real-time ATP analysis reveals stress-dependent Pfkfb3 modification and its effect on hematopoiesis2022

    • Author(s)
      綿貫慎太郎、小林央、杉浦悠毅、山本正道、城下郊平、反町優理子、小出周平、大島基彦、西山晃、村上紘一、原口美帆、玉置新平、山本雄広、岡本真一郎、田村智彦、末松誠、岩間厚志、田久保圭誉
    • Organizer
      第84回日本血液学会学術集会
    • Related Report
      2022 Research-status Report
  • [Presentation] Nociceptive nerves facilitate hematopoietic cell homing to bone marrow by tuning microcirculation2022

    • Author(s)
      Shinya Fujita, Takayuki Morikawa, Keisuke Kataoka, Keiyo Takubo
    • Organizer
      第84回日本血液学会学術集会
    • Related Report
      2022 Research-status Report
  • [Presentation] Optimized culture condition that improves post-editing function of hematopoietic stem cells2022

    • Author(s)
      Kohei Shiroshita, Hiroshi Kobayashi, Keisuke Kataoka, Keiyo Takubo
    • Organizer
      第84回日本血液学会学術集会
    • Related Report
      2022 Research-status Report
  • [Presentation] An optimized culture condition for hematopoietic stem cells that improves the gene editing efficiency and post-editing function2022

    • Author(s)
      Kohei Shiroshita, Hiroshi Kobayashi, Daiki Karigane, Keiyo Takubo
    • Organizer
      ISEH2022
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Remarks] 国立国際医療研究センター研究所生体恒常性プロジェクト公式ウェブサイト

    • URL

      https://takubolab.com/

    • Related Report
      2023 Annual Research Report 2022 Research-status Report

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Published: 2022-07-05   Modified: 2025-01-30  

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