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Regulation of developmental robustness by cell death signaling

Research Project

Project/Area Number 23229002
Research Category

Grant-in-Aid for Scientific Research (S)

Allocation TypeSingle-year Grants
Research Field General medical chemistry
Research InstitutionThe University of Tokyo

Principal Investigator

Miura Masayuki  東京大学, 薬学研究科(研究院), 教授 (50202338)

Project Period (FY) 2011-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥214,760,000 (Direct Cost: ¥165,200,000、Indirect Cost: ¥49,560,000)
Fiscal Year 2015: ¥42,640,000 (Direct Cost: ¥32,800,000、Indirect Cost: ¥9,840,000)
Fiscal Year 2014: ¥42,640,000 (Direct Cost: ¥32,800,000、Indirect Cost: ¥9,840,000)
Fiscal Year 2013: ¥42,640,000 (Direct Cost: ¥32,800,000、Indirect Cost: ¥9,840,000)
Fiscal Year 2012: ¥42,640,000 (Direct Cost: ¥32,800,000、Indirect Cost: ¥9,840,000)
Fiscal Year 2011: ¥44,200,000 (Direct Cost: ¥34,000,000、Indirect Cost: ¥10,200,000)
Keywordsカスパーゼ / 細胞死 / エピジェネティクス / 神経発生 / 代謝 / 頑強性 / 遺伝学 / 細胞運命 / ゆらぎ / ショウジョウバエ / マウス / 環境 / 頑強生
Outline of Final Research Achievements

Selection of sensory organ precursor (SOP) by cell death occurs in the early stage of neural development in Drosophila. SOP cell number is regulated by non-apoptotic caspase activity. We identified the histone methyltransferase eggless/SETDB1 that can synergistically regulate SOP cell number with caspase, suggesting epigenetic histone modification can regulate the robust control of SOP cell number collaborating with non-apoptotic caspase function. For robust tissue regeneration, we found that imaginal disc injury systemically control the methionine metabolism in fat body. Changes of methionine metabolism in fat body then remotely control the imaginal disc regeneration, suggesting that cell death controls tissue regeneration systemically. In mammalian neural development, we found that apoptosis precisely controlled the size and elimination of FGF8 signaling center, thereby actively regulating signal center activity for establishment of robust patterning of brain development.

Assessment Rating
Verification Result (Rating)

A

Assessment Rating
Result (Rating)

A: Progress in the research is steadily towards the initial goal. Expected research results are expected.

Report

(9 results)
  • 2016 Research Progress Assessment (Verification Result) ( PDF )
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report   Abstract(Research Progress Assessment) ( PDF )   Research Progress Assessment (Result) ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (44 results)

All 2016 2015 2014 2013 2012 2011 Other

All Journal Article (28 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 28 results,  Acknowledgement Compliant: 11 results,  Open Access: 12 results) Presentation (13 results) (of which Int'l Joint Research: 4 results,  Invited: 7 results) Remarks (3 results)

  • [Journal Article] Tissue non-autonomous effects of fat body methionine metabolism on imaginal disc repair in Drosophila.2016

    • Author(s)
      Kashio, S., Obata, F., Zhang, L., Katsuyama, T., Chihara, T., and Miura, M.
    • Journal Title

      Proc. Natl. Acad. Sci. USA.

      Volume: 113 Issue: 7 Pages: 1835-1840

    • DOI

      10.1073/pnas.1523681113

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Induction of rapid and selective cell necrosis in Drosophila using Bacillus thuringiensis Cry toxin and its silkworm receptor.2015

    • Author(s)
      Obata, F., Tanaka, S., Kashio, S., Tsujimura, H., Sato, R., and Miura, M.
    • Journal Title

      BMC Biol.

      Volume: 13 Issue: 1 Pages: 48-48

    • DOI

      10.1186/s12915-015-0160-2

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Enhancing S-adenosyl-methionine catabolism extends Drosophila lifespan.2015

    • Author(s)
      Obata, F., and Miura, M.
    • Journal Title

      Nature Comm.

      Volume: 6 Issue: 1 Pages: 8332-8332

    • DOI

      10.1038/ncomms9332

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A STRIPAK component Strip regulates neuronal morphogenesis by affecting microtubule stability.2015

    • Author(s)
      Sakuma, C., Okumura, M., Umehara, T., Miura, M., and T. Chihara.
    • Journal Title

      Sci. Rep.

      Volume: 5 Issue: 1 Pages: 17769-17769

    • DOI

      10.1038/srep17769

    • NAID

      120006800823

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Linking cell curface receptors to microtubules: Tubulin Folding Cofactor D mediates Dscam functions during neuronal morphogenesis.2015

    • Author(s)
      Okumura, M., Sakuma, C., Miura, M., and Chihara, T.
    • Journal Title

      J.Neurosci.

      Volume: 35 Pages: 1979-1990

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Programmed Cell Death in Neurodevelopment.2015

    • Author(s)
      Yamaguchi, Y., and Miura, M.
    • Journal Title

      Dev. Cell

      Volume: 32 Issue: 4 Pages: 478-490

    • DOI

      10.1016/j.devcel.2015.01.019

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Necrosis-Driven Systemic Immune Response Alters SAM Metabolism through the FOXO-GNMT Axis2014

    • Author(s)
      Obata F, Kuranaga E, Tomioka K, Ming M, Takeishi A, Chen CH, Soga T, Miura M
    • Journal Title

      Cell Rep.

      Volume: 7 Issue: 3 Pages: 821-833

    • DOI

      10.1016/j.celrep.2014.03.046

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Methionine metabolism regulates maintenance and differentiation of human pluripotent stem cells.2014

    • Author(s)
      Shiraki, N., Shiraki, Y., Tsuyama, T., Obata, F., Miura, M., Nagae, G., Aburatani, H., Kume, K., Endo, F., and Kume, S.
    • Journal Title

      Cell Metab.

      Volume: 19 Issue: 5 Pages: 780-794

    • DOI

      10.1016/j.cmet.2014.03.017

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A stripak component Strip serves as a platform for early endosome organization during axon elongation.2014

    • Author(s)
      Sakuma, C., Kawauchi, T., Haraguchi, S., Shikanai, M., Yamaguchi, Y., Gelfand, V.I., Luo, L., Miura, M., and Chihara, T.
    • Journal Title

      Nature Comm.

      Volume: 5 Issue: 1 Pages: 5180-5180

    • DOI

      10.1038/ncomms6180

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Caspase inhibition in select olfactory neurons restores innate attraction behavior in aged Drosophila.2014

    • Author(s)
      Chihara, T., Kitabayashi, A., Morimoto, M., Takeuchi, K., Masuyama, K., Tonoki, A., Davis, R.L., Wang, J.W., and Miura, M.
    • Journal Title

      PLOS Genetics

      Volume: 10 Issue: 6 Pages: e1004437-e1004437

    • DOI

      10.1371/journal.pgen.1004437

    • NAID

      120006799366

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Selective Ablation of β-Galactosidase-expressing Cells with a Rationally Designed Activatable Photosensitizer2014

    • Author(s)
      Yuki Ichikawa, Mako Kamiya, Fumiaki Obata, Masayuki Miura, Takuya Terai, Toru Komatsu, Tasuku Ueno, Kenjiro Hanaoka, Tetsuo Nagano, Yasuteru Urano
    • Journal Title

      Angew. Chem. Int. Ed.

      Volume: 53 Issue: 26 Pages: 6772-6775

    • DOI

      10.1002/anie.201403221

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Drosophila TNF ortholog Eiger: Emerging physiological roles and evolution of the TNF system.2014

    • Author(s)
      Igaki, T., and Miura, M.
    • Journal Title

      Seminar Immunol.

      Volume: 26 Issue: 3 Pages: 267-274

    • DOI

      10.1016/j.smim.2014.05.003

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Interplay of cell proliferation and cell death in Drosophila tissue regeneration.2014

    • Author(s)
      Kashio, S., Obata, F., and Miura, M.
    • Journal Title

      Dev. Growth Diff.

      Volume: 56 Issue: 5 Pages: 368-375

    • DOI

      10.1111/dgd.12139

    • NAID

      40020109497

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Persephone/Spatzle pathogen sensors mediate the activation of Toll receptor signaling in response to endogenous danger signals in apoptosis-deficient Drosophila2014

    • Author(s)
      Ming M, Obata F, Kuranaga E, Miura M
    • Journal Title

      J Biol Chem.

      Volume: 289 Issue: 11 Pages: 7558-7568

    • DOI

      10.1074/jbc.m113.543884

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mechanisms of Systemic Wound Response in Drosophila.2014

    • Author(s)
      Lee W-J., and Miura, M
    • Journal Title

      Cur. Tpoics Dev. Biol.

      Volume: 108 Pages: 153-183

    • DOI

      10.1016/b978-0-12-391498-9.00001-2

    • ISBN
      9780123914989
    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Local apoptosis modulates early mammalian brain development through the elimination of morphogen producing cells.2013

    • Author(s)
      Nonomura, K., Yamaguchi, Y., Hamachi, M., Koike, M., Uchiyama, Y., Nakazato, K., Mochizuki, A., Sakaue-Sawano, A., Miyawaki, A., Yoshida, H., Kuida, K., and Miura, M.
    • Journal Title

      Dev. Cell

      Volume: 27 Issue: 6 Pages: 621-634

    • DOI

      10.1016/j.devcel.2013.11.015

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Meigo governs dendrite targeting specificity by modulating Ephrin level and N-glycosylation.2013

    • Author(s)
      Sekine, S.U., Haraguchi. S., Chao, K., Kato, T., Luo, L., Miura, M., and Chihara, T.
    • Journal Title

      Nature Neuro Sci.

      Volume: 16 Issue: 6 Pages: 683-691

    • DOI

      10.1038/nn.3389

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Homeostatic epithelial renewal in the gut is required for dampening a fatal systemic wound response in Drosophila2013

    • Author(s)
      Takeishi A, Kuranaga E, Tonoki A, Misaki K, Yonemura S, Kanuka H, Miura M
    • Journal Title

      Cell Rep.

      Volume: 3 Issue: 3 Pages: 919-930

    • DOI

      10.1016/j.celrep.2013.02.022

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The kelch repeat protein KLHDC10 regulates oxidative stress-induced ASK1 activation by suppressing PP52012

    • Author(s)
      Yusuke Sekine, Ryo Hatanaka, Takeshi Watanabe. Naoki Sono, Shun-ichiro Iemura, Tohru Natsume, Erina Kuranaga, Masayuki Miura, Kohsuke Takeda, and Hidenori Ichijo
    • Journal Title

      Molecular Cell

      Volume: 48 Issue: 5 Pages: 1-13

    • DOI

      10.1016/j.molcel.2012.09.018

    • NAID

      120007150217

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] NanoPARCEL : a method for controlling cellular behavior with external light.2012

    • Author(s)
      Murayama, M., Su, B., Okabe, K., Kishimura, A., Osada, K., Miura, M., Funatsu, T., Kataoka, K., and Kato, M
    • Journal Title

      Chem Comm.

      Volume: 48 Issue: 67 Pages: 8380-8382

    • DOI

      10.1039/c2cc32718j

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Prevention of apoptosis by mitochondrial phosphatase PGAM5 in the mushroom body is crucial for heat shock resistance in Drosophila melanogaster2012

    • Author(s)
      Ishida, Y., et al.
    • Journal Title

      PloS ONE

      Volume: 7 Issue: 2 Pages: 3006-3016

    • DOI

      10.1371/journal.pone.0030265

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] How to form and close the brain: insight into the mechanism of cranial neural tube closure in mammals2012

    • Author(s)
      Yamaguchi, Y., and Miura, M
    • Journal Title

      Cell Mol Life Sci.

      Volume: 10.1007 Issue: 17 Pages: 1420-9071

    • DOI

      10.1007/s00018-012-1227-7

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Apoptotic and nonapoptotic caspase functions in animal development2012

    • Author(s)
      Miura, M
    • Journal Title

      Cold Spring Harb. Perspect. Biol.

      Volume: 4 Issue: 10 Pages: a008664-a008664

    • DOI

      10.1101/cshperspect.a008664

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Aging causes distinct characteristics of polyglutamine amyloids in vivo2011

    • Author(s)
      Tonoki, A., E. Kuranaga, N. Ito, Y. Nekooki-Machida, Tanaka, M., and Miura, M.
    • Journal Title

      Genes to Cells

      Volume: 16 Issue: 5 Pages: 557-564

    • DOI

      10.1111/j.1365-2443.2011.01505.x

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Apoptosis controls the speed of looping morphogenesis in Drosophila male terminalia2011

    • Author(s)
      Kuranaga, E., Matsunuma, T., Kanuka, H., Takemoto, K., Koto, A., Kimura, K and Miura, M.
    • Journal Title

      Development

      Volume: 138 Issue: 8 Pages: 1493-1499

    • DOI

      10.1242/dev.058958

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Non-autonomusapoptosis is triggered by local cell cycl eprogression during epithelial replacement in Drosophila2011

    • Author(s)
      Nakajima, Y-I, Kuranaga, E., Sugimura, K., Miyawaki, A., and Miura, M.
    • Journal Title

      Mol. Cell Biol

      Volume: 31 Issue: 12 Pages: 2499-2512

    • DOI

      10.1128/mcb.01046-10

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conserved metabolic energy production pathways govern Eiger/TNF-induced non-apoptotic cell death2011

    • Author(s)
      Kanda, H., Igaki, T., Okano, H., and Miura, M.
    • Journal Title

      Proc. Natl. Acad. Sci. USA

      Volume: 108 Issue: 47 Pages: 18977-18982

    • DOI

      10.1073/pnas.1103242108

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Live imaging of apoptosis in a novel transgenic mouse highlights its role in neural tube closure2011

    • Author(s)
      Yamaguchi, Y., Shinotsuka, N., Nonomura, K., Takemoto, K, Kuida, K., Yoshida, H., Miura, M.
    • Journal Title

      Journal of Cell Biology

      Volume: 195 Issue: 6 Pages: 1047-1060

    • DOI

      10.1083/jcb.201104057

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] Tissue damage response through systemic regulation of S-adenosyl-methionine metabolism2016

    • Author(s)
      Miura, M.
    • Organizer
      International Symposium on Transcription and Metabolism
    • Place of Presentation
      東京大学薬学部講堂、東京
    • Year and Date
      2016-02-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Tissue interactive reactions mediated by cell death2015

    • Author(s)
      Miura, M.
    • Organizer
      European Cell Death Organization 23rd conference
    • Place of Presentation
      Geneva, Switzerland
    • Year and Date
      2015-10-07
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Cell death triggers systemic response for damaged tissue remodeling2015

    • Author(s)
      Miura, M.
    • Organizer
      1st international symposium on cell competition
    • Place of Presentation
      芝蘭会館、京都
    • Year and Date
      2015-09-10
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Cell death signaling by caspase activation during neural development and inflammation.2015

    • Author(s)
      Miura, M
    • Organizer
      XXIV International Symposium on Morphological Sciences
    • Place of Presentation
      Istanbul, Turkey
    • Year and Date
      2015-09-02
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Methionine metabolism involves coordination of cell death and stem cell proliferation in Drosophila.2014

    • Author(s)
      Obata, F., Yamazaki, T., and Miura, M.
    • Organizer
      EMBO/EMBL Symposium Frontiers in Metabolism
    • Place of Presentation
      Heidelberg, Germany
    • Year and Date
      2014-11-17 – 2014-11-20
    • Related Report
      2014 Annual Research Report
  • [Presentation] Reorganization of Embryonic Energy Metabolism during Mouse Mid-Gestation Stage.2014

    • Author(s)
      Miyazawa, H., Yamaguchi, Y., Sugiura, Y., Yamamoto, M., Suematsu, M., Miura, M.
    • Organizer
      EMBO/EMBL Symposium, Frontiers in Metabolism
    • Place of Presentation
      Heidelberg, Germany
    • Year and Date
      2014-11-17 – 2014-11-20
    • Related Report
      2014 Annual Research Report
  • [Presentation] Live-imaging of caspase-1 activation reveals an all-or-none response of inflammasome signaling.2014

    • Author(s)
      Liu, T., Yamaguchi, Y., Shirasaki, T., Shikada, K., Yamagishi, M., Hoshino, K., Kaisho, T., Takemoto, K., Suzuki, T., Kuranaga, E., Ohara, O., and Miura, M.
    • Organizer
      The International Symposium on Mechanisms of Innate Immunity, Cell Death and Inflammation.
    • Place of Presentation
      Ghent, Belgium
    • Year and Date
      2014-09-25 – 2014-09-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] Programmed cell death functions to adjust the bilateral symmetry of the wing size.2014

    • Author(s)
      Shinoda, N., Koto, A., and Miura, M.
    • Organizer
      The 11th Japanese Drosophila Research Conference
    • Place of Presentation
      Kanazawa, Japan
    • Year and Date
      2014-06-04 – 2014-06-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] Dynamics and active roles of caspase-mediated cell death during development and inflammation.2014

    • Author(s)
      Miura, M.
    • Organizer
      Korean Society for Biochemistry and Molecular Biology.
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2014-05-14 – 2014-05-16
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Live FRET imaging of apoptotic and inflammatory caspase activation during cell death.2013

    • Author(s)
      Miura, M. , and Yamaguchi, Y.
    • Organizer
      Cold Spring Harbor Asia “Mechanisms & functions of non-apoptotic cell death”
    • Place of Presentation
      Suzhou, China.
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Physiological function of cell death in development and tissue remodeling2012

    • Author(s)
      Miura, M.
    • Organizer
      EMBO Workshop
    • Place of Presentation
      Ein-Gedi, Israel(招待講演)
    • Year and Date
      2012-02-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] Function of apoptosis in early brain development2012

    • Author(s)
      Miura, M
    • Organizer
      14th International Congress of Histochemistry and Cytochemistry
    • Place of Presentation
      Kyoto, Japan
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Physiological function of caspases in organogenesis and tissue remodeling2011

    • Author(s)
      Miura, M.
    • Organizer
      25^<th> Annual French Drosophila Conference
    • Place of Presentation
      Lyon, France(招待講演)
    • Year and Date
      2011-10-19
    • Related Report
      2011 Annual Research Report
  • [Remarks] 東京大学大学院薬学系研究科遺伝学教室ホームページ

    • URL

      http://www.f.u-tokyo.ac.jp/~genetics/index.html

    • Related Report
      2015 Annual Research Report
  • [Remarks] 東京大学大学院薬学系研究科遺伝学教室のホームページ

    • URL

      http://www.f.u-tokyo.ac.jp/~genetics/index.html

    • Related Report
      2014 Annual Research Report
  • [Remarks]

    • URL

      http://www.f.u-tokyo.ac.jp/~genetics/index.html

    • Related Report
      2011 Annual Research Report

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Published: 2011-06-18   Modified: 2019-07-29  

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