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Single molecule physiology, inner molecules, molecules and cells

Research Project

Project/Area Number 23247022
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionThe University of Tokyo

Principal Investigator

HIDEO Higuchi  東京大学, 理学(系)研究科(研究院), 教授 (90165093)

Project Period (FY) 2011-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥48,490,000 (Direct Cost: ¥37,300,000、Indirect Cost: ¥11,190,000)
Fiscal Year 2013: ¥15,990,000 (Direct Cost: ¥12,300,000、Indirect Cost: ¥3,690,000)
Fiscal Year 2012: ¥17,030,000 (Direct Cost: ¥13,100,000、Indirect Cost: ¥3,930,000)
Fiscal Year 2011: ¥15,470,000 (Direct Cost: ¥11,900,000、Indirect Cost: ¥3,570,000)
Keywordsダイニン / 単頭 / 力 / 変位 / エンドサイトーシス / 1分子 / Tatペプチド / 細胞 / モータータンパク質 / ナノメートル
Outline of Final Research Achievements

We use optical trapping to show the single molecule properties and the effect of load on the mechanochemical cycle of the motor domain of human dynein. The double-headed motor domain is responsible for producing a high force of ~6 pN with a predominant step size of 8 nm. An unbinding force measurement indicates that dynein-microtubule binding is weak for the ADP-vanadate state and strong for the nucleotide-free, AMPPNP and ADP states. The unbinding force was weaker when dynein was pulled toward the minus end of microtubule. Our results suggest that force plays an important role in the mechanochemical cycle of dynein to ensure the increasing of a probability for rear-head detachment with strain.
We imaged the trafficking of PAR-1 carrying vesicles to analyze the movement of activated PAR-1 after internalization. By the triple-view method consisting of dual-focus fluorescence and phase contrast optics, we detected endocytosis quantum dots 3-dimensional with high special precision.

Report

(4 results)
  • 2014 Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (20 results)

All 2014 2013 2012 2011

All Journal Article (7 results) (of which Peer Reviewed: 4 results,  Open Access: 4 results,  Acknowledgement Compliant: 1 results) Presentation (10 results) (of which Invited: 5 results) Book (3 results)

  • [Journal Article] A novel approach for purification and selective capture of membrane vesicles of the periodontopathic bacterium, Porphyromonas gingivalis: membrane vesicles bind to magnetic beads coated with epoxy groups in a noncovalent, species-specific manner.2014

    • Author(s)
      Nakao R, Kikushima K, Higuchi H, Obana N, Nomura N, Bai D, Ohnishi M, Senpuku H.
    • Journal Title

      PLoS One.

      Volume: 9 Issue: 5 Pages: 1-10

    • DOI

      10.1371/journal.pone.0095137

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Single quantum dot tracking reveals that an individual multivalent 2 HIV-1 Tat-protein transduction domain can activate machinery for 3 lateral transport and endocytosis2013

    • Author(s)
      3.Yasuhiro Suzuki*, Chandra Nath Roy, Warunya Promjunyaku, Hiroyasu Hatakeyama, Kohsuke Gonda, Junji Imamura, Biju Vasudevan Pillai, Noriaki Ohuchi, Makoto Kanzaki , Hideo Higuchi, and Mitsuo Kaku
    • Journal Title

      Mol. Cell Biol.

      Volume: 33 Issue: 15 Pages: 3039-3049

    • DOI

      10.1128/mcb.01717-12

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A non-invasive imaging for the in vivo tracking of high-speed vesicle transport in mouse neutrophils2013

    • Author(s)
      3.Kenji Kikushima, Sayaka Kita and Hideo Higuchi
    • Journal Title

      Scientific reports

      Volume: 3 Issue: 1 Pages: 1-10

    • DOI

      10.1038/srep01913

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Stiffness, working stroke and force of single myosins in skeletal muscle: Elucidation of these mechanical properties by non-linear elasticity2013

    • Author(s)
      Kaya. M. and H. Higuchi
    • Journal Title

      Cell and Mol. life Sci

      Volume: 70 Issue: 22 Pages: 4275-4292

    • DOI

      10.1007/s00018-013-1353-x

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 歩行型分子モーター,ダイニン2013

    • Author(s)
      神原丈敏、樋口,秀男
    • Journal Title

      パリティ

      Volume: 28 Pages: 14-16

    • Related Report
      2012 Annual Research Report
  • [Journal Article] 筋肉の巧みな収縮メカニズム2012

    • Author(s)
      茅元司,樋口秀男
    • Journal Title

      感染・炎症・免疫

      Volume: 42 Pages: 116-123

    • Related Report
      2012 Annual Research Report
  • [Journal Article] ナノバイオ2011

    • Author(s)
      樋口秀男
    • Journal Title

      理大科学フォーラム

      Volume: 8 Pages: 19-24

    • Related Report
      2011 Annual Research Report
  • [Presentation] Biophysical and Biochemical characterization of human cytoplasmic dynein.2013

    • Author(s)
      神原丈敏、木下慶美、中山貴之、樋口秀男
    • Organizer
      日本生物物理学会年会,
    • Place of Presentation
      京都
    • Year and Date
      2013-10-28 – 2013-10-30
    • Related Report
      2013 Annual Research Report
  • [Presentation] Power Stroke Measurement of Human Cytoplasmic Dynein2013

    • Author(s)
      木下慶美、神原丈敏、池田諭史、樋口秀男
    • Organizer
      日本生物物理学会年会,
    • Place of Presentation
      京都
    • Year and Date
      2013-10-28 – 2013-10-30
    • Related Report
      2013 Annual Research Report
  • [Presentation] Symposium on Biophysics toward In Vivo work2013

    • Author(s)
      7.Hideo Higuchi and Norio Fukuda
    • Organizer
      日本生物物理学会年会
    • Place of Presentation
      京都
    • Year and Date
      2013-10-28 – 2013-10-30
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] The mechanomhemical cycle of human cytoplasmic dynein under external force.2013

    • Author(s)
      神原丈敏、谷芳明、茅元司、島知弘、樋口秀男
    • Organizer
      14th International Alpbach Workshop on Molecular Motors
    • Place of Presentation
      Albach (Austria)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 光の運動量変化に基づく細胞内 小胞に働く力の測定」2013

    • Author(s)
      三上貴司、樋口秀男
    • Organizer
      2013 年生体運動研究合同班会議
    • Place of Presentation
      広島大学(広島県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Force generation mechanism of single skeletal myosin molecules in myofilaments.2012

    • Author(s)
      茅元司
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 外部 負荷存在下でのヒト細胞質ダイニンのメカノケミカル サイクル2012

    • Author(s)
      神原丈敏、谷芳明、茅元司、島知弘、樋口秀男
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Single molecule biophysics in an in vivo and in vitro2012

    • Author(s)
      Higuchi H.
    • Organizer
      Japan-Taiwan joint symposium
    • Place of Presentation
      京都大学(京都府)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] Application of optical tweezers to understand molecular mechanism of muscle contractions.2012

    • Author(s)
      Motoshi Kaya
    • Organizer
      International Symposium on Nanomedicine
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] Unbinding force measurement of recombinant human cytoplasmic dynein.2011

    • Author(s)
      Kambara
    • Organizer
      Gordon Research Conference
    • Place of Presentation
      New Hampsher USA
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Book] 1分子生物学2014

    • Author(s)
      樋口秀男,多田隈尚史
    • Publisher
      化学同人
    • Related Report
      2013 Annual Research Report
  • [Book] Handbook of Dynein2012

    • Author(s)
      豊島陽子、樋口秀男
    • Total Pages
      18
    • Publisher
      Pan Stanford Publishing Pte.Ltd
    • Related Report
      2012 Annual Research Report
  • [Book] Handbook of Dynein2012

    • Author(s)
      Toyoshima
    • Total Pages
      20
    • Publisher
      Academic press
    • Related Report
      2011 Annual Research Report

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Published: 2011-04-06   Modified: 2019-07-29  

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