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Study on chemical structure and mechanism of soil-phase electron mediator enhancing dechlorination activity of anaerobic microorganisms

Research Project

Project/Area Number 23310055
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Environmental technology/Environmental materials
Research InstitutionNagoya University

Principal Investigator

KATAYAMA arata  名古屋大学, エコトピア科学研究所, 教授 (60185808)

Co-Investigator(Kenkyū-buntansha) 鈴木 大典  名古屋大学, エコトピア科学研究所, 助教 (10591076)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥19,760,000 (Direct Cost: ¥15,200,000、Indirect Cost: ¥4,560,000)
Fiscal Year 2013: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2012: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2011: ¥7,670,000 (Direct Cost: ¥5,900,000、Indirect Cost: ¥1,770,000)
Keywords固体電子メディエータ / 脱ハロゲン反応 / 芳香族ハロゲン化合物 / 酸化還元中心 / 細胞外電子伝達系 / ヒューミン / ペンタクロロフェノール / 四臭化ビスフェノールA / 嫌気脱ハロゲン反応 / 嫌気的脱塩素反応 / キノン構造 / 化学的安定性 / 微生物付着 / 腐植物質 / 電子メディエータ / 還元的脱ハロゲン反応 / 13C-NMR / サイクリックボルタンメトリ / ESR / FT-IR
Research Abstract

Solid-phase humin, a fraction of humic substances in soil and sediment which is not soluble in any pH condition, was found to function as external electron mediator for the anaerobic consortium reductively-dechlorinating pentachlorophenol. The humic acids extracted from the same source did not support the pentachlorophenol dechlorination. The redox-reacting centers of humin were suggested to be quinone structure or iron-organic acid chelating complex, based on the analyses using FT-IR, NMR, ESR, cyclic voltammetry. It was suggested that a novel Dehalobacter sp., requiring reduced-form humin as electron donor and pentachlorophenol as electron acceptor for the organohalide respiration, was present in the enriched consortium. It was considered that the electrons transfer from humin to microbial cells directly.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (47 results)

All 2014 2013 2012 2011

All Journal Article (8 results) (of which Peer Reviewed: 5 results) Presentation (37 results) (of which Invited: 5 results) Patent(Industrial Property Rights) (2 results)

  • [Journal Article] Anaerobic 4-chlorophenol mineralization in an enriched culture under iron-reducing conditions2014

    • Author(s)
      Zhiling Li, Daisuke Suzuki, Chunfang Zhang, Suyin Yang, Naoko Yoshida, and Arata Katayama
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: (in press) Issue: 5 Pages: 529-532

    • DOI

      10.1016/j.jbiosc.2014.04.007

    • NAID

      110009894837

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Use of a glass bead-containing liquid medium for efficient production of a soil-free culture with polychlorinated biphenyl-dechlorination activity2013

    • Author(s)
      Daisuke Suzuki, Daisuke Baba, Velayudhan Satheeja Santhi, Robinson David Jebakumar Solomon, and Arata Katayama
    • Journal Title

      World Journal of Microbiology and Biotechnology

      Volume: 29 Issue: 8 Pages: 1461-1471

    • DOI

      10.1007/s11274-013-1310-8

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Involvement of Dehalobacter spp. in the anaerobic dechlorination of 2,4,6-trichlorophenol2013

    • Author(s)
      Zhiling Li, Daisuke Suzuki, Chunfang Zhang, Naoko Yoshida, Suyin Yang, and Arata Katayama
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: 116(5) Issue: 5 Pages: 602-609

    • DOI

      10.1016/j.jbiosc.2013.05.009

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Journal Article] A humin-dependent Dehalobacter species is involved in reductive debromination of tetrabromobisphenol A2013

    • Author(s)
      Chunfang Zhang, Zhiling Li, Daisuke Suzuki, Lizhen Ye, Naoko Yoshidaaoko, and Arata Katayama
    • Journal Title

      Chemosphere

      Volume: 92 Issue: 10 Pages: 1343-1348

    • DOI

      10.1016/j.chemosphere.2013.05.051

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Effects of lactate and sulfate concentration ratios on the anaerobic mineralization of pentachlorophenol (PCP) in a combined PCP-dechlorinating and phenol-degrading culture2013

    • Author(s)
      Suyin Yang, Yasushi Inoue, Arata Katayama
    • Journal Title

      Research Journal of Biotechnology

      Volume: 8(9) Pages: 4-9

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Journal Article] Humin as an electron mediator for microbial reductive dehalogenation2012

    • Author(s)
      Chunfang Zhang, Arata Katayama
    • Journal Title

      Environmental Science and Technology

      Volume: 46 Issue: 12 Pages: 6575-6583

    • DOI

      10.1021/es3002025

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols2012

    • Author(s)
      Chunfang Zhang, Daisuke Suzuki, Zhiling Li, Lizhen Ye, Arata Katayama
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: 114(5) Issue: 5 Pages: 512-517

    • DOI

      10.1016/j.jbiosc.2012.05.025

    • NAID

      110009553583

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Long-term anaerobic mineralization of pentachlorophenol in a continuous-flow system using only lactate as an external nutrient2012

    • Author(s)
      Zhiling Li, Yasushi Inoue, Daisuke Suzuki, Lizhen Ye and Arata Katayama
    • Journal Title

      Environmental Science and Technology

      Volume: 47 Pages: 1534-1541

    • DOI

      10.1021/es303784f

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Presentation] Anaerobic organohalide degradation by multiple microbial species for bioremediation2013

    • Author(s)
      Arata Katayama
    • Organizer
      Launching Ceremony of IWA China Anaerobic Digestion Committee & Sino-Dutch AD Technology Workshop
    • Place of Presentation
      Harbin Institute of Technology, Harbin, China
    • Year and Date
      2013-05-06
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Towards an Understanding of the Role of Humin as a Solid-phase Electron Mediator for Anaerobic Respiration2013

    • Author(s)
      Chunfang Zhang, Lizhen Ye, Toyoko Demachi, Daisuke Suzuki, and Arata Katayama
    • Organizer
      the 21st International Symposium on Environmental Biogeochemistry (ISEM2013)
    • Place of Presentation
      Wuhan, China
    • Related Report
      2013 Final Research Report
  • [Presentation] Electron Transfer from a Graphite Electrode Assisted by Solid-Phase Electron Mediator (humin) Immobilization Enhances Microbial Reductive Dechlorination of Pentachlorophenol2013

    • Author(s)
      Dongdong Zhang, Chunfang Zhang, Zhiling Li, Daisuke Suzuki, and Arata Katayama
    • Organizer
      International Symposium on EcoTopia Science 2013
    • Place of Presentation
      Nagoya University, Nagoya, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Insoluble iron-humate complex as an electron mediator for microbial reductive dechlorination2013

    • Author(s)
      Chunfang Zhang, Dongdong Zhang, Zhiling Li, Tetsuji Akatsuka, Suying Yang, Daisuke Suzuki, and Arata Katayama
    • Organizer
      第29回日本微生物生態学会
    • Place of Presentation
      鹿児島大学、日本
    • Related Report
      2013 Final Research Report
  • [Presentation] Anaerobic organohalide degradation by multiple microbial species for bioremediation2013

    • Author(s)
      Arata Katayama
    • Organizer
      Launching Ceremony of IWA China Anaerobic Digestion Committee & Sino-Dutch AD Technology Workshop
    • Place of Presentation
      Harbin, China
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Towards an Understanding of the Role of Humin as a Solid-phase Electron Mediator for Anaerobic Respiration2013

    • Author(s)
      Chunfang ZHANG, Lizhen Ye, Demachi Toyoko, Daisuke Suzuki, Arata Katayama
    • Organizer
      the 21st International Symposium on Environmental Biogeochemistry
    • Place of Presentation
      Wuhan, China
    • Related Report
      2013 Annual Research Report
  • [Presentation] Electron Transfer from a Graphite Electrode Assisted by Solid-Phase Electron Mediator (humin) Immobilization Enhances Microbial Reductive Dechlorination of Pentachlorophenol2013

    • Author(s)
      D. Zhang, C. Zhang, Z. Li, D. Suzuki, A. Katayama
    • Organizer
      International Symposium on EcoTopia Science 2013
    • Place of Presentation
      Nagoya, Japan
    • Related Report
      2013 Annual Research Report
  • [Presentation] Insoluble iron-humate complex as an electron mediator for microbial reductive dechlorination2013

    • Author(s)
      Chunfang Zhang, Dongdong Zhang, Zhiling Li, Tetsuji Akatuka, Suying Yang, Daisuke Suzuki, Arata Katayama
    • Organizer
      第29回日本微生物生態学会
    • Place of Presentation
      鹿児島大学、鹿児島
    • Related Report
      2013 Annual Research Report
  • [Presentation] Polyphasic characterization of two anaerobic microbial consortia dechlorinating wide spectra of phenols with lower levels of chlorination2012

    • Author(s)
      Chunfang Zhang, Daisuke Suzuki, Zhiling Li, Lizhen Ye, and Arata Katayama
    • Organizer
      WET2012 Water and Environment Technology Conference
    • Place of Presentation
      The University of Tokyo, Tokyo, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Characterization of a Dehalobacter-dominating consortium that debrominates Tetrabromobisphenol A (poster)2012

    • Author(s)
      Chunfang Zhang, Zhiling Li, Daisuke Suzuki, Lizhen Ye, Naoko Yoshida and Arata Katayama
    • Organizer
      The power of the small-the 14th International Symposium on Microbial Ecology .ISME-14
    • Place of Presentation
      The Bella Center , Copenhagen Denmark
    • Related Report
      2013 Final Research Report
  • [Presentation] Characteristics of a 4-chlorophenol degrading, sulfate-reducing bacterium isolated from a river sediment contaminated with chlorinated solvents (poster)2012

    • Author(s)
      Daisuke Suzuki, Arata Katayama
    • Organizer
      The power of the small-the 14th International Symposium on Microbial Ecology .ISME-14
    • Place of Presentation
      The Bella Center , Copenhagen Denmark
    • Related Report
      2013 Final Research Report
  • [Presentation] A novel Dehalobacter sp. is involved in anaerobic dechlorination of Trichlorophenol (TCP) (Oral)2012

    • Author(s)
      Zhiling Li, Daisuke Suzuki, Chunfang Zhang, Arata Katayama
    • Organizer
      The 15th International biotechnology Synposium and Exhibition (IBS)
    • Place of Presentation
      Daegu, Korea
    • Related Report
      2013 Final Research Report
  • [Presentation] Long.term Anaerobic Mineralization of PCP in a Continuous.Flow System Using Only Lactate as an External Nutrient (Oral)2012

    • Author(s)
      Zhiling Li, Yasushi Inoue, Daisuke Suzuki, Lizhen Ye and Arata Katayama
    • Organizer
      the 4th International Conference on Soil Pollution and Remediation (SOILREM 2012)
    • Place of Presentation
      Yantai, China
    • Related Report
      2013 Final Research Report
  • [Presentation] Microbial cofinment technology of groundwater contaminated with halogenated organic pollutants2012

    • Author(s)
      Arata Katayama, Zhiling Li., Chunfang Zhang, Dongdong Zhang, Suyin Yang, and Daisuke Suzuki
    • Organizer
      First International Symposium on Advanced Water Science and Technology (ISAWST-1)
    • Place of Presentation
      Noyori Conference Hall, Nagoya University, Nagoya, Japan
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Microbial reductive dechlorination of pentachlorophenol mediated by humin (poster)2012

    • Author(s)
      Chunfang Zhang, Zhiling Li., Daisuke Suzuki, and Arata Katayama
    • Organizer
      First International Symposium on Advanced Water Science and Technology (ISAWST-1)
    • Place of Presentation
      Noyori Conference Hall, Nagoya University, Nagoya, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Spatial distribution of functional populatioins in a long-term maintained column for pentachlorophenol (PCP) anaerobic mineralization (poster)2012

    • Author(s)
      Zhiling Li., Daisuke Suzuki, Chunfang Zhang, Yasushi Inoue, and Arata Katayama
    • Organizer
      First International Symposium on Advanced Water Science and Technology (ISAWST-1)
    • Place of Presentation
      Noyori Conference Hall, Nagoya University, Nagoya, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Influence of electron donors and electron acceptors on the 3-chlorophenol dechlorination activity of anaerobic enrichment culture (poster)2012

    • Author(s)
      Daisuke Suzuki, Zhiling Li., Chunfang Zhang, and Arata Katayama
    • Organizer
      First International Symposium on Advanced Water Science and Technology (ISAWST-1)
    • Place of Presentation
      Noyori Conference Hall, Nagoya University, Nagoya, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Polyphasic characterization of two anaerobic microbial consortia dechlorinating wide spectra of phenols with lower levels of chlorination2012

    • Author(s)
      Chunfang ZHANG
    • Organizer
      WET2012 Water and Environment Technology Conference
    • Place of Presentation
      東京大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] Characterization of a Dehalobacter-dominating consortium that debrominates Tetrabromobisphenol A2012

    • Author(s)
      Chunfang ZHANG
    • Organizer
      the 14th International Symposium on Microbial Ecology –ISME-14
    • Place of Presentation
      The Bella Center , Copenhagen Denmark
    • Related Report
      2012 Annual Research Report
  • [Presentation] Characteristics of a 4-chlorophenol degrading, sulfate-reducing bacterium isolated from a river sediment contaminated with chlorinated solvents2012

    • Author(s)
      Daisuke SUZUKI
    • Organizer
      the 14th International Symposium on Microbial Ecology –ISME-14
    • Place of Presentation
      The Bella Center , Copenhagen Denmark
    • Related Report
      2012 Annual Research Report
  • [Presentation] A novel Dehalobacter sp. is involved in anaerobic dechlorination of Trichlorophenol (TCP)2012

    • Author(s)
      Zhiling Li
    • Organizer
      The 15th International biotechnology Synposium and Exhibition (IBS)
    • Place of Presentation
      Daegu, Korea
    • Related Report
      2012 Annual Research Report
  • [Presentation] Long–term Anaerobic Mineralization of PCP in a Continuous–Flow System Using Only Lactate as an External Nutrient2012

    • Author(s)
      Zhiling LI
    • Organizer
      the 4th International Conference on Soil Pollution and Remediation (SOILREM 2012)
    • Place of Presentation
      Yantai Oriental Haitian Hotel, China
    • Related Report
      2012 Annual Research Report
  • [Presentation] Microbial cofinment technology of groundwater contaminated with halogenated organic pollutants2012

    • Author(s)
      Arata Katayama
    • Organizer
      First International Symposium on Advanced Water Science and Technology (ISAWST-1)
    • Place of Presentation
      Nagoya University, Japan
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Spatial distribution of functional populatioins in a long-term maintained column for pentachlorophenol (PCP) anaerobic mineralization2012

    • Author(s)
      Zhiling LI
    • Organizer
      First International Symposium on Advanced Water Science and Technology (ISAWST-1)
    • Place of Presentation
      Nagoya University, Japan
    • Related Report
      2012 Annual Research Report
  • [Presentation] Influence of electron donors and electron acceptors on the 3-chlorophenol dechlorination activity of anaerobic enrichment culture2012

    • Author(s)
      Daisuke Suzuki
    • Organizer
      First International Symposium on Advanced Water Science and Technology (ISAWST-1)
    • Place of Presentation
      Nagoya University, Japan
    • Related Report
      2012 Annual Research Report
  • [Presentation] Anaerobic degradation of aromatic compounds by microorganisms in paddy field2011

    • Author(s)
      Arata Katayama, Naoko Yoshida, Atsuchi Shibata, Daisuke Baba, Suyin Yang, Zhiling Li, Hyou-Ken Kim, Chunfang Zhang, and Daisuke Suzuki
    • Organizer
      KSEA's 30th Anniversary International Symposium on Environment and Food Safety for the Future Generation
    • Place of Presentation
      the international Convention Center Jeju , Korea
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Characterization of microbial community dechlorinating PCP to phenol with the presence of soil (Oral)2011

    • Author(s)
      Chunfang Zhang, Lizhen Ye, Zhiling Li, Daisuke Suzuki, Toyoko Demachi, and Arata Katayama
    • Organizer
      The 4th IWA-ASPIRE Tokyo
    • Place of Presentation
      Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Simulation of the reductive dechlorination processes in a lab-scale anaerobic biobarrier with the enriched TCP dechlorination consortium (Oral)2011

    • Author(s)
      Zhiling Li, Yasushi Inoue, Takuya Mizoguchi, Yohei Simizu, Naoko Yoshida and Arata Katayama
    • Organizer
      The International Conference on 7th Environmental Anaerobic Technologies and Bioenergy
    • Place of Presentation
      Tianjin University, Tianjin, China
    • Related Report
      2013 Final Research Report
  • [Presentation] Enrichment of 4-chlorophenol-degrading culture under both iron-reducing and sulfate-reducing conditions (Oral)2011

    • Author(s)
      Zhiling Li, Suyin Yang, Daisuke Suzuki, and Arata Katayama
    • Organizer
      International Symposium on EcoTopia Science 2011
    • Place of Presentation
      Nagoya University, Nagoya, Japan
    • Related Report
      2013 Final Research Report
  • [Presentation] Microbial reductive debromination of Tetrabromobisphenol A (Oral)2011

    • Author(s)
      Chunfang Zhang, Zhiling Li, Daisuke Suzuki, and Arata Katayama
    • Organizer
      第14回水環境学会シンポジウム
    • Place of Presentation
      仙台
    • Related Report
      2013 Final Research Report
  • [Presentation] The microbial spatial distribution in a long-term maintained biobarrier for pentachlorophenol (PCP) anaerobic mineralization (Oral)2011

    • Author(s)
      Zhiling Li, Yasushi Inoue, Daisuke Suzuki, Arata Katayama
    • Organizer
      第14回水環境学会シンポジウム
    • Place of Presentation
      仙台
    • Related Report
      2013 Final Research Report
  • [Presentation] Anaerobic degradation of aromatic compounds by microorganisms in paddy2011

    • Author(s)
      Katayama, A., Yoshida, N., Shibata, A., Baba, D., Yang, S., Li, Z., Kim, H., Zhang, C., Suzuki, D
    • Organizer
      KSEA's 30th Anniversary International Symposium on Environment and Food Safety for the Future Generation
    • Place of Presentation
      the international Convention Center Jeju, Korea(Invited)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Characterization of microbial community dechlorinating PCP to phenol with the presence of soil.(Oral)2011

    • Author(s)
      Chunfang ZHANG Zhiling LI, Daisuke SUZUKI, Toyoko DEMACHI, Arata KATAYAMA
    • Organizer
      The 4th IWA-ASPIRE
    • Place of Presentation
      Tokyo, Japan
    • Related Report
      2011 Annual Research Report
  • [Presentation] Simulation of the reductive dechlorination processes in a lab-scale anaerobic biobarrier with the enriched TCP dechlorination consortium2011

    • Author(s)
      Zhiling LI, Yasushi INOUE, Takuya MIZOGUCHI, Yohei SIMIZU, Naoko YOSHIDA, Arata KATAYAMA
    • Organizer
      The 7^<th> International Conference on Environmental Anaerobic Technologies and Bioenergy
    • Place of Presentation
      Tianjin University, Tianjin, China
    • Related Report
      2011 Annual Research Report
  • [Presentation] Enrichment of 4-chlorophenol-degrading culture under both iron-reducing and sulfate-reducing conditions2011

    • Author(s)
      Zhiling LI, Suyin YANG, Daisuke SUZUKI, Arata KATAYAMA
    • Organizer
      International Symposium on EcoTopia Science 2011
    • Place of Presentation
      Nagoya University, Nagoya,Japan
    • Related Report
      2011 Annual Research Report
  • [Presentation] Microbial reductive debromination of Tetrabromobisphenol A2011

    • Author(s)
      Chunfang ZHANQ Zhiling LI, Daisuke SUZUKI, Arata KATAYAMA
    • Organizer
      第14回水環境学会シンポジウム
    • Place of Presentation
      仙台
    • Related Report
      2011 Annual Research Report
  • [Presentation] The microbial spatial distribution in a long-term maintained biobar rier for pentachlorophenol (PCP) anaerobic mineralization2011

    • Author(s)
      Zhiling LI, Yasushi INOUE, Daisuke SUZUKI, Arata KATAYAMA
    • Organizer
      第14回水環境学会シンポジウム
    • Place of Presentation
      仙台
    • Related Report
      2011 Annual Research Report
  • [Patent(Industrial Property Rights)] 電子伝達システムおよびその用途2013

    • Inventor(s)
      片山新太、章春芳、張冬冬、李智灵、鈴木大典
    • Industrial Property Rights Holder
      名古屋大学
    • Industrial Property Rights Type
      特許
    • Filing Date
      2013-07-31
    • Related Report
      2013 Final Research Report
  • [Patent(Industrial Property Rights)] 電子伝達システムおよびその用途2013

    • Inventor(s)
      片山新太、章春芳、張冬冬、李智リン、鈴木大典
    • Industrial Property Rights Holder
      名古屋大学
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2013-158394
    • Filing Date
      2013-07-31
    • Related Report
      2013 Annual Research Report

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Published: 2011-04-06   Modified: 2019-07-29  

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