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Functional analysis of a histone methyltransferase in colorectal cancer by comprehensive genome analysis

Research Project

Project/Area Number 23310137
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Medical genome science
Research InstitutionThe University of Tokyo

Principal Investigator

FURUKAWA Yoichi  東京大学, 医科学研究所, 教授 (20272560)

Co-Investigator(Kenkyū-buntansha) IKENOUE Tsuneo  東京大学, 医科学研究所, 准教授 (80396712)
YAMAGUCHI Rui  東京大学, 東京大学, 講師 (90380675)
YAMAGUCHI Kiyoshi  東京大学, 医科学研究所, 助教 (50466843)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥20,540,000 (Direct Cost: ¥15,800,000、Indirect Cost: ¥4,740,000)
Fiscal Year 2013: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2012: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2011: ¥8,580,000 (Direct Cost: ¥6,600,000、Indirect Cost: ¥1,980,000)
Keywords疾患関連遺伝子 / ゲノム / 大腸がん / ヒストン / メチル基転移酵素 / 大腸癌
Research Abstract

Expression profile analysis using colon cancer cells treated with SMYD3-specific siRNA identified a total of 1543 genes (entities) that were significantly upregulated by SMYD3. Subsequent in silico analysis using MetaGP revealed that these genes are potentially controlled by 126 transcription factors. Combined with the data of ChIP on chip analysis using anti-SMYD3 antibody, we identified 110 candidates of target genes of SMYD3. In addition, gene ontology and gene set enrichment analyses elucidated that elevated SMYD3 expression is associated with cell cycle control. These data suggest that SMYD3 plays a crucial role in proliferation of cancer cells and that inhibition of its function should be a rational strategy to treat human cancers.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (38 results)

All 2014 2013 2012 2011 Other

All Journal Article (18 results) (of which Peer Reviewed: 8 results) Presentation (18 results) Remarks (2 results)

  • [Journal Article] Identification of two Wnt-responsive elements in the intron of RING Finger Protein 43 (RNF43) gene2014

    • Author(s)
      Takahashi N, Yamaguchi K, Ikenoue T, Fujii T, Furukawa Y
    • Journal Title

      PLoS ONE

      Volume: 9

    • Related Report
      2013 Final Research Report
  • [Journal Article] Overexpression of cohesion establishment factor DSCC1 through E2F in colorectal cancer2014

    • Author(s)
      Yamaguchi K, Yamaguchi R, Takahashi N, Ikenoue T, Fujii T, Shinozaki M, Tsurita G, Hata K, Niida A, Imoto S, Miyano S, Nakamura Y, Furukawa Y
    • Journal Title

      PLoS ONE

      Volume: 9

    • Related Report
      2013 Final Research Report
  • [Journal Article] Identification of two Wnt-responsive elements in the intron of RING Finger Protein 43 (RNF43) gene.2014

    • Author(s)
      Takahashi N, Yamaguchi K, Ikenoue T, Fujii T, Furukawa Y.
    • Journal Title

      PLoS ONE

      Volume: 9 Issue: 1 Pages: e86582-e86582

    • DOI

      10.1371/journal.pone.0086582

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Overexpression of cohesion establishment factor DSCC1 through E2F in colorectal cancer.2014

    • Author(s)
      Yamaguchi K, Rui Yamaguchi R, Takahashi N, Ikenoue T, Fujii T, Shinozaki M, Tsurita G, Hata K, Niida A, Imoto S, Miyano S, Nakamura Y, Furukawa Y
    • Journal Title

      PLoS ONE

      Volume: 9 Issue: 1 Pages: e85750-e85750

    • DOI

      10.1371/journal.pone.0085750

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Early detection of metachronous bile duct cancer in Lynch syndrome : report of a case2013

    • Author(s)
      Shigeyasu K, Tanakaya K, Nagasaka T, Aoki H,Fujiwara T, Sugano K, Ishikawa H, Yoshida T, Moriya Y, Furukawa Y, Goel A, Takeuchi H.
    • Journal Title

      Surg Today

    • Related Report
      2013 Final Research Report
  • [Journal Article] Wnt3a stimulates maturation of impaired neutrophils developed from severe congenital neutropenia patient-derived pluripotent stem cells2013

    • Author(s)
      Hiramoto T, Ebihara Y, Mizoguchi Y, Nakamura K, Yamaguchi K, Ueno K, Michizuki S, Yamamoto S, Nagasaki M, Furukawa Y, Tani K, Nakauchi H, Kobayashi M, Tsuji K
    • Journal Title

      Proc. Natl. Acad. Sci. USA

      Volume: 110(8) Pages: 3023-3028

    • Related Report
      2013 Final Research Report
  • [Journal Article] Quantitative PCR detection of CEP110-FGFR1 fusion gene in a patient with 8p11 syndrome2013

    • Author(s)
      Yamamoto S, Ebihara Y, Mochizuki S, Kawakita T,Kato S, Ooi J, Tojo A, Yusa N, Furukawa Y, Oyaizu N, Watanabe J, Sato K, Kimura F, and Tsuji K
    • Journal Title

      Leukemia & Lymphoma

      Volume: 54(9) Pages: 2068-9

    • Related Report
      2013 Final Research Report
  • [Journal Article] Wnt3a stimulates maturation of impaired neutrophils developed from severe congenital neutropenia-derived pluipotent stem cells with heterozygous ELANE mutation.2013

    • Author(s)
      Hiramoto T
    • Journal Title

      Proc Natl Acad Sci USA

      Volume: 110 Issue: 8 Pages: 3023-3028

    • DOI

      10.1073/pnas.1217039110

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quantitative polymerase chain reaction detection of CEP110-FGFR1 fusion gene in a patient with 8p11 myeloproliferative syndrome2013

    • Author(s)
      Yamamoto S, Ebihara Y, Mochizuki S, Kawakita T, Kato S, Ooi J, Takahashi S, Tojo A, Yusa N, Furukawa Y, Oyaizu N, Watanabe J, Sato K, Kimura F, Tsuji K.
    • Journal Title

      Leukemia and Lymphoma

      Volume: 54 Issue: 9 Pages: 2068

    • DOI

      10.3109/10428194.2013.767455

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Aberrant splicing caused by a MLH1 splice donor site mutation found in a young Japanese patient with Lynch syndrome2012

    • Author(s)
      Takahashi M, Furukawa Y, Shimodaira H, Sakayori M, Moriya T, Moriya Y, Nakamura Y, Ishioka C
    • Journal Title

      Fam Cancer

      Volume: 11(4) Pages: 559-64

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Journal Article] CLCA2 as a p53-inducible senescence mediator2012

    • Author(s)
      Tanikawa C, Nakagawa H, Furukawa Y, Nakamura Y, Matsuda K
    • Journal Title

      Neoplasia

      Volume: 14(2) Pages: 141-9

    • Related Report
      2013 Final Research Report
  • [Journal Article] CLCA2 as a p53-inducible senescence mediator2012

    • Author(s)
      C.Tanikawa, H.Nakagawa, Y.Furukawa, Y.Nakamura, K.Matsuda
    • Journal Title

      Neoplasia

      Volume: 14 Issue: 2 Pages: 141-149

    • DOI

      10.1593/neo.111700

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MRG-binding protein contributes to colorectal cancer development2011

    • Author(s)
      Yamaguchi K, Sakai M, Kim J, Tsunesumi S, Fujii T, Ikenoue T, Yamada Y, Akiyama Y, Muto Y, Yamaguchi R, Miyano S, Nakamura Y, Furukawa Y
    • Journal Title

      Cancer Sci

      Volume: 102(8) Pages: 1486-92

    • NAID

      10030242078

    • Related Report
      2013 Final Research Report
  • [Journal Article] Smyd3 is required for the development of cardiac and skeletal muscle in zebrafish2011

    • Author(s)
      Fujii T, Tsunesumi S, Yamaguchi K, Watanabe S, & Furukawa Y
    • Journal Title

      PLoS One

      Volume: 6(8)

    • Related Report
      2013 Final Research Report
  • [Journal Article] SMYD3 interacts with HTLV-1 Tax and regulates sub-cellular localization of Tax2011

    • Author(s)
      Yamamoto K, Ishida T, Nakano K, Yamagishi M, Yamochi T, Tanaka Y, Furukawa Y, Nakamura Y, Watanabe T
    • Journal Title

      Cancer Science

      Volume: 102 Pages: 260-266

    • NAID

      10029289377

    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Journal Article] Smyd3 is required for the development of cardiac and skeletal muscle in zebrafish2011

    • Author(s)
      Fujii T, Tsunesumi S, Yamaguchi K, Watanabe S, Furukawa Y
    • Journal Title

      PLoS One

      Volume: 6

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MRG-binding protein contributes to colorectal cancer development2011

    • Author(s)
      Yamaguchi K, Sakai M, Kim J, Tsunesumi S, Fujii T, Ikenoue T, Yamada Y, Akiyama Y, Muto Y, Yamaguchi R, Miyano S, Nakamura Y, Furukawa Y
    • Journal Title

      Cancer Science

      Volume: 102 Pages: 1486-1492

    • NAID

      10030242078

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A case of hereditary hemorrhagic telangiectasia (Osler-Weber-Rendu disease) with multiple polyps arising in the cecum and appendix2011

    • Author(s)
      Kaneko M, Nozawa H, Kitayama J, Sunami E, Akahane M, Yamauchi N, Furukawa Y, Nagawa H
    • Journal Title

      Acta Gastroenterol Belg

      Volume: 74 Pages: 352-354

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] 家族性腫瘍基礎と臨床2013

    • Organizer
      第22回日本癌学会市民公開講座
    • Place of Presentation
      横浜
    • Year and Date
      2013-10-05
    • Related Report
      2013 Final Research Report
  • [Presentation] 患者さんひとりひとりの治療のために2013

    • Organizer
      第22回日本癌学会市民公開講座
    • Place of Presentation
      横浜
    • Year and Date
      2013-10-05
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Identification of a single nucleotide polymorphism associated with SIAJ2 expression2013

    • Organizer
      第22回日本癌学会市民公開講座
    • Place of Presentation
      横浜
    • Year and Date
      2013-10-04
    • Related Report
      2013 Final Research Report
  • [Presentation] リングフィンガープロテイン43 の転写調節機構2013

    • Organizer
      第22回日本癌学会市民公開講座
    • Place of Presentation
      横浜
    • Year and Date
      2013-10-03
    • Related Report
      2013 Final Research Report
  • [Presentation] 次世代シークエンサーがもたらす近未来の医療2013

    • Organizer
      第19回日本家族性腫瘍学会学術集会
    • Place of Presentation
      大分
    • Year and Date
      2013-07-27
    • Related Report
      2013 Final Research Report
  • [Presentation] DSCC1 is a novel biomarker for chemo-resistant colorectal cancer2013

    • Organizer
      The 9th AACR-JCA- Joint Conference
    • Place of Presentation
      Hawaii USA
    • Year and Date
      2013-02-23
    • Related Report
      2013 Final Research Report
  • [Presentation] 家族性腫瘍 基礎と臨床2013

    • Author(s)
      古川洋一
    • Organizer
      第72回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] リングフィンガープロテイン43の転写調節機構および下流遺伝子解析2013

    • Author(s)
      髙橋則彦 山口貴世志 池上恒雄 古川洋一
    • Organizer
      第72回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] Idenntification of a single nucleotide polymorphism associated with SIAH2 expression2013

    • Author(s)
      Seham Elgazzar 髙橋則彦 山口貴世志 前仏均 片桐豊雅 池上恒雄 中村祐輔 古川洋一
    • Organizer
      第72回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] DSCC1 is a novel biomarker for chemo-resistant colorectal cancer.2013

    • Author(s)
      Kiyoshi Yamaguchi, Rui Yamaguchi, Masaru Shinozaki, GIichiro Tsurita, Keisuke Hata, Seiya Imoto, Satoru Miyano, Yusuke Nakamura, Yoichi Furukawa
    • Organizer
      The 9th AACR-JCA Joint Conference
    • Place of Presentation
      Maui HI, USA
    • Related Report
      2012 Annual Research Report
  • [Presentation] DSCC1 promotes survival of colorectal cancer cells through the inhibition of BCL2 expression2012

    • Organizer
      The 8th Symposium on Cancer Research and Therapy
    • Place of Presentation
      東京
    • Year and Date
      2012-11-10
    • Related Report
      2013 Final Research Report
  • [Presentation] Identifying the target of histone methyltransferase SMYD3 in colorectal cancer cells2012

    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      札幌
    • Year and Date
      2012-09-21
    • Related Report
      2013 Final Research Report
  • [Presentation] Smyd3 is required for the development of heart and skeletal muscle in zebrafish2012

    • Organizer
      KEYSTONE SYMPOSIA Epigenomics
    • Place of Presentation
      Keystone, Colorado, USA
    • Year and Date
      2012-01-18
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] Identifying the target of histone methyltransferase SMYD3 in colorectal cancer cells2012

    • Author(s)
      山口貴世志、池上恒雄、宮野悟、中村祐輔、古川洋一
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      ロイトン札幌(札幌)
    • Related Report
      2012 Annual Research Report
  • [Presentation] DSCC1 promotes survival of colorectal cancer cells through the inhibition of BCL2 expression2012

    • Author(s)
      Kiyoshi Yamaguchi, Rui Yamaguchi, Masaru Shinozaki, GIichiro Tsurita, Keisuke Hata, Seiya Imoto, Satoru Miyano, Yusuke Nakamura, Yoichi Furukawa
    • Organizer
      The 8th, International Symposium on Cancer Research and Therapy
    • Place of Presentation
      東京会館(東京)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Defective in sister chromatoid cohesion 1 homolog (DSCC1), a novel target of E2F1 is overexpressed in colorectal cancer2011

    • Organizer
      第70回日本癌学会学術総
    • Place of Presentation
      名古屋
    • Year and Date
      2011-10-04
    • Related Report
      2013 Final Research Report
  • [Presentation] Defective in sister chromatoid cohesion 1 homolog (DSCC1), a novel target of E2F1 is overexpressed in colorectal cancer2011

    • Author(s)
      山口貴世志、藤井智明、池上恒雄、中村祐輔、古川洋一
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋
    • Year and Date
      2011-10-04
    • Related Report
      2011 Annual Research Report
  • [Presentation] MRGBP (C20orf20) contributes to development of colorectal cancer2011

    • Author(s)
      Kiyoshi Yamaguchi, Michihiro Sakai, Joohun Kim, Yoshinao Yamada, Yoshiyuki Akiyama, Yusuke Nakamura, Yoichi Furukawa
    • Organizer
      The 102th. Annual meeting of American Association for Cancer Research
    • Place of Presentation
      Orlando FL, USA
    • Year and Date
      2011-04-04
    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.ims.u-tokyo.ac.jp/furukawa/index.html

    • Related Report
      2013 Final Research Report
  • [Remarks] 東京大学医科学研究所

    • URL

      http://www.ims.u-tokyo.ac.jp/imsut/jp/

    • Related Report
      2012 Annual Research Report

URL: 

Published: 2011-04-06   Modified: 2019-07-29  

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