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Deformation dynamics of composite lipid membranes

Research Project

Project/Area Number 23340121
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics/Chemical physics
Research InstitutionKyoto University

Principal Investigator

TANIGUCHI Takashi  京都大学, 工学(系)研究科(研究院), 准教授 (60293669)

Co-Investigator(Kenkyū-buntansha) YAMAMOTO Ryoichi  京都大学, 大学院・工学研究科, 教授 (10263401)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥20,150,000 (Direct Cost: ¥15,500,000、Indirect Cost: ¥4,650,000)
Fiscal Year 2013: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2012: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2011: ¥12,740,000 (Direct Cost: ¥9,800,000、Indirect Cost: ¥2,940,000)
Keywords脂質二重膜 / 流体膜 / 相分離 / ベシクル / 多成分脂質膜 / 相転移 / 非対称膜 / ラフト
Research Abstract

In this project, we have addressed a construction of a minimum theoretical model to describe dynamics of artificial multi-component lipid membranes and vesicles. By using the model, we performed numerical simulations to reveal the physical origin of various phenomena seen in biomembranes from physical points of view. We investigated various membrane systems (for example, dynamics of a pore-rim-rolled vesicle, effect of hydrodynamic flow inside and outside of vesicle and effect of intra-membrane hydrodynamics on their dynamics, and effect of asymmetric distribution of stress between two leaflets in lipid bilayer) , where intra-membrane degree of freedom play essential role.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (48 results)

All 2014 2013 2012 Other

All Journal Article (15 results) (of which Peer Reviewed: 15 results) Presentation (27 results) (of which Invited: 12 results) Book (2 results) Remarks (4 results)

  • [Journal Article] Stochastic interactions of two Brownian hard spheres in the presence of depletants2014

    • Author(s)
      M. Karzar-Jeddi, R. Tuinier, T. Taniguchi and T.-H. Fan
    • Journal Title

      Journal of Chemical Physics

      Volume: 140 Issue: 21

    • DOI

      10.1063/1.4880199

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Freezing of stressed bilayers and vesicles2014

    • Author(s)
      A. Lamberg and T. Taniguchi
    • Journal Title

      Soft Matter

      Volume: 10(DOI:110.1039/c3sm52432a) Pages: 257-261

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Nanoporous structure of the cell walls of polycarbonate foams2014

    • Author(s)
      P. Gong, T. Taniguchi and M. Ohshima
    • Journal Title

      Journal of Materials Science

      Volume: 49 Issue: 6 Pages: 2605-2617

    • DOI

      10.1007/s10853-013-7959-4

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Freezing of Stressed Bilayers and Vesicle2014

    • Author(s)
      Antti Lamberg and Takashi Taniguchi
    • Journal Title

      Soft Matter

      Volume: 10 Issue: 2 Pages: 257-261

    • DOI

      10.1039/c3sm52432a

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Large-scale dynamics of directed self-assembly defects on chemically pre-patterned surface2013

    • Author(s)
      Kenji Yoshimoto and Takashi Taniguchi
    • Journal Title

      Alternative Lithographic Technologies V (Proc. SPIE)

      Volume: 8680 Pages: 86801-86801

    • DOI

      10.1117/12.2011826

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Large-Scale Simulations of Directed Self-Assembly with Simplified Model2013

    • Author(s)
      Kenji Yoshimoto and Takashi Taniguchi
    • Journal Title

      Journal of Photopolymer Science and Technology

      Volume: 26 Issue: 6 Pages: 809-816

    • DOI

      10.2494/photopolymer.26.809

    • NAID

      130004833557

    • ISSN
      0914-9244, 1349-6336
    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mathematical models and numerical simulations of a thermally expandable microballoon for plastic foaming2013

    • Author(s)
      M. Fujino, T. Taniguchi, Y. Kawaguchi, and M. Ohshima
    • Journal Title

      Chemical Engineering Science

      Volume: 104 Pages: 220-227

    • DOI

      10.1016/j.ces.2013.09.010

    • NAID

      120005341887

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Tubular membrane formation of binary giant unilamellar vesicles composed of cylinder and inverse-cone shaped lipids2013

    • Author(s)
      Y. Sakuma, T. Taniguchi, T. Kawakatsu M. Imai
    • Journal Title

      The Biophysical Journal

      Volume: 105 Issue: 9 Pages: 2074-2081

    • DOI

      10.1016/j.bpj.2013.09.021

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Multiscale modeling for polymeric flow : particle-fluid bridging scale methods2013

    • Author(s)
      T. Murashima, S. Yasuda, T. Taniguchi, R. Yamamoto
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 82 Issue: 1 Pages: 12001-12001

    • DOI

      10.7566/jpsj.82.012001

    • NAID

      210000132334

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] "Large-Scale Simulations of Directed Self-Assembly with Simplified Model2013

    • Author(s)
      Kenji Yoshimoto and Takashi Taniguchi
    • Journal Title

      Journal of Photopolymer Science and Technology

      Volume: 26 Pages: 809-816

    • NAID

      130004833557

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multiscale simulation of history dependent flow in entangled polymer melt2012

    • Author(s)
      T. Murashima, T. Taniguchi
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 81 Issue: Suppl.A Pages: SA013-SA013

    • DOI

      10.1143/jpsjs.81sa.sa013

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] How flow changes polymer depletion in a slit2012

    • Author(s)
      T. Taniguchi, Y.Arai, R. Tuinier, T.-H. Fan
    • Journal Title

      The European Physical Journal E

      Volume: 35 Issue: 9 Pages: 88-88

    • DOI

      10.1140/epje/i2012-12088-7

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Revealed architectures of adsorbed polymer chains at solid-polymer melt interfaces2012

    • Author(s)
      P. Gin, N. Jiang, C. Liang, T. Taniguchi, B. Akgun, S. K. Satija, M.K. Endoh, T. Koga
    • Journal Title

      Physical Review Letters

      Volume: 109 Issue: 26

    • DOI

      10.1103/physrevlett.109.265501

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Two-dimensional lattice liquid models2012

    • Author(s)
      Y. Ishimoto, T. Murashima, T. Taniguchi, R. Yamamoto
    • Journal Title

      Physical Review E

      Volume: 86 Issue: 3

    • DOI

      10.1103/physreve.86.031124

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multiscale simulation of history dependent flow in entangled polymer melt2012

    • Author(s)
      Takahiro Murashima, Takashi Taniguchi
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 81

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 物体周りの高分子流体の流れと分散粒子ダイナミクス2014

    • Author(s)
      谷口貴志
    • Organizer
      日本接着学会関西接着ワークショップ第4回研究会
    • Place of Presentation
      おうばくプラザ京都大学化学研究所
    • Year and Date
      2014-03-19
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 物体周りの高分子流体の流れと分散粒子ダイナミクス2014

    • Author(s)
      谷口貴志
    • Organizer
      日本接着学会 関西接着ワークショップ第4回研究会
    • Place of Presentation
      おうばくプラザ 京都大学 化学研究所
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 物体周りの高分子流体の流れ-高分子サイズのスケールからマクロスケールまで-2013

    • Author(s)
      谷口貴志
    • Organizer
      第46回文体工学会「数値紛体力学研究会」講演会
    • Place of Presentation
      同志社大学
    • Year and Date
      2013-12-03
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Change of Polymer Depletion near Solvent Permeable Flat Wall by Hydrodynamic Flow (II)2013

    • Author(s)
      T. Taniguchi, Y. Arai, T.-H. Fan, R.Tuinier
    • Organizer
      第二回ソフトマター研究会
    • Place of Presentation
      九州大学西新プラザ
    • Year and Date
      2013-09-19
    • Related Report
      2013 Final Research Report
  • [Presentation] Rolled-rim formation in a two component vesicle with a single pore2013

    • Author(s)
      T. Taniguchi
    • Organizer
      The Fourteenth International Membrane Research Forum, Featuring Meso-Scale Molecular Complexes and Domains and their Functions in the Membrane
    • Place of Presentation
      iCeMS Main Building, Kyoto University. Japan
    • Year and Date
      2013-03-16
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] GPI-anchored proteins induced micro-scale domains and their interaction2013

    • Author(s)
      T.Taniguchi
    • Organizer
      Self-organization and emergent dynamics in active soft matter
    • Place of Presentation
      Yukawa Inst. Kyoto, Japan
    • Year and Date
      2013-02-18
    • Related Report
      2013 Final Research Report
  • [Presentation] Force acting on a moving colloidal particle in a polymer solution2013

    • Author(s)
      谷口貴志
    • Organizer
      第3回ソフトマター研究会
    • Place of Presentation
      首都大学東京
    • Related Report
      2013 Final Research Report
  • [Presentation] Frictional force on a moving spherical particle in a polymer solution2013

    • Author(s)
      T. Taniguchi, Y.Arai, R. Tuinier, T.-H. Fan
    • Organizer
      レオロジー学会 第61回レオロジー討論会
    • Place of Presentation
      山形大学工学部
    • Related Report
      2013 Final Research Report
  • [Presentation] Dynamics of two component membrane2013

    • Author(s)
      T. Taniguchi
    • Organizer
      International Workshop "From Soft Matter to Protocell"
    • Place of Presentation
      Tohoku University
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 高分子溶融体流れのマルチスケールシミュレーション --- 溶融紡糸への応用 ---2013

    • Author(s)
      谷口貴志, 高瀬知大
    • Organizer
      高分子学会第62回高分子討論会
    • Place of Presentation
      金沢大学
    • Related Report
      2013 Final Research Report
  • [Presentation] Force acting on a moving colloidal particle in a polymer solution2013

    • Author(s)
      谷口貴志
    • Organizer
      第3回ソフトマター研究会
    • Place of Presentation
      首都大学東京 (南大沢キャンパス)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 物体周りの高分子流体の流れ -高分子サイズのスケールからマクロスケールまで-2013

    • Author(s)
      谷口貴志
    • Organizer
      第46回 粉体工学会『計算粉体力学研究会』講演会
    • Place of Presentation
      同志社大学 (京都・今出川キャンパス)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Frictional force on a moving spherical particle in a polymer solution2013

    • Author(s)
      T. Taniguchi, Y. Arai, R. Tuinier, Tai-Hsi Fan
    • Organizer
      レオロジー学会 第61回 レオロジー討論会
    • Place of Presentation
      山形大学工学部 (米沢)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Dynamics of Two Component Membrane2013

    • Author(s)
      Takashi Taniguchi
    • Organizer
      International Workshop "From Soft Matter to Protocell"
    • Place of Presentation
      Sakura Hall, Tohoku University
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 高分子溶融体流れのマルチスケールシミュレーション --- 溶融紡糸への応用---2013

    • Author(s)
      谷口貴志, 高瀬和大
    • Organizer
      高分子学会 第62回(2013年)高分子討論会
    • Place of Presentation
      金沢大学 角間キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] Rolled-rim formation in a two component vesicle with a single pore2013

    • Author(s)
      Takashi Taniguchi
    • Organizer
      he Fourteenth International Membrane Research Forum, Featuring Meso-Scale Molecular Complexes and Domains and their Functions in the Membrane
    • Place of Presentation
      iCeMS Main Building, Kyoto University
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] GPI-anchored proteins induced micro-scale domains and their interaction2013

    • Author(s)
      Takashi Taniguchi
    • Organizer
      Self-orgranization and Emergent Dynamics in Active Soft Matter
    • Place of Presentation
      Yukawa Inst. Kyoto, Japan
    • Related Report
      2012 Annual Research Report
  • [Presentation] Multiscale simulation of flow in entangled polymer melts around a cylindrical obstacle2012

    • Author(s)
      T. Taniguchi and T.Murashima
    • Organizer
      The 28th International Conference of the Polymer Processing Society
    • Place of Presentation
      Pattaya Thailand
    • Year and Date
      2012-12-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Softmatter physics : Multiscale simulations for polymer melt flow2012

    • Author(s)
      T. Taniguchi
    • Organizer
      Kyoto University-Durham University Joint International Symposium 2012 : Emergence and Feedback in Physical and Social Systems
    • Place of Presentation
      Institute of Chemical Research, Seminar Hall, Kyoto, Japan
    • Year and Date
      2012-11-28
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Flow-distorted polymer depletion between solvent permeable walls2012

    • Author(s)
      T. Taniguchi, Y. Arai, R. Tuinier, and Tai-Hsi Fan
    • Organizer
      International Congress of Rheology 2012
    • Place of Presentation
      The Belem Cultural Center, Lisbon, Portugal
    • Year and Date
      2012-08-07
    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Presentation] Dynamics of shape deformation and phase separation in two component vesicle2012

    • Author(s)
      T. Taniguchi
    • Organizer
      KITPC : Membrane Biophysics ¦ Theory and Experiment
    • Place of Presentation
      Kavli Institute for Theoretical Physics, Beijing, China
    • Year and Date
      2012-05-21
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Formation of stimulation-induced meso-scale membrane domains2012

    • Author(s)
      T. Taniguchi and A. Kusumi
    • Organizer
      Phase Transition Dynamics in Soft Matter : Bridging Microscale and Mesoscale
    • Place of Presentation
      Yukawa Institute for Theoretical Physics, Kyoto, Japan
    • Year and Date
      2012-02-21
    • Related Report
      2013 Final Research Report
  • [Presentation] Formation of stimulation-induced meso-scale membrane domains2012

    • Author(s)
      谷口貴志、楠見明弘
    • Organizer
      国際会議:Phase Transition Dynamics in Soft Matter : Bridging Microscale and Mesoscale
    • Place of Presentation
      Yukawa Institute for Theoretical Physics, Kyoto, Japan
    • Year and Date
      2012-02-21
    • Related Report
      2011 Annual Research Report
  • [Presentation] Dynamics of shape deformation and phase separation in two component vesicle2012

    • Author(s)
      Takashi Taniguchi
    • Organizer
      KITPC: Membrane Biophysics | Theory and Experiment
    • Place of Presentation
      Kavli Institute for Theoretical Physics, Beijing, China
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Softmatter Physics : Multiscale simulations for polymer melt flow2012

    • Author(s)
      Takashi Taniguchi
    • Organizer
      Kyoto University-Durham University Joint International Symposium 2012: Emergence and Feedback in Physical and Social Systems
    • Place of Presentation
      Institute of Chemical Research, Seminar Hall, Kyoto, Japan
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Multiscale Simulation of Flow in Entangled Polymer Melts around a Cylindrical Obstacle2012

    • Author(s)
      Takashi Taniguchi and Takahiro Murashima
    • Organizer
      The 28th International Conference of the Polymer Processing Society
    • Place of Presentation
      Pattya 5 Room (Session:Rheology and Rheometry), Royal Cliff Beach Hotel, Pattaya, Thailand
    • Related Report
      2012 Annual Research Report
  • [Presentation] Change fo Polymer Depletion near Solvent Permeable Flat Wall by Hydrodynamic Flow (II)2012

    • Author(s)
      Takashi Taniguchi, Yuichiro Arai, Tai-Hsi Fan, Remco Tuinier
    • Organizer
      第二回ソフトマター研究会
    • Place of Presentation
      九州大学 西新プラザ
    • Related Report
      2012 Annual Research Report
  • [Book] 高分子ナノテクノロジー2014

    • Author(s)
      谷口貴志
    • Publisher
      株式会社エヌ・ティー・エス
    • Related Report
      2013 Final Research Report
  • [Book] 高分子ナノテクノロジーハンドブック2014

    • Author(s)
      谷口貴志
    • Publisher
      株式会社 エヌ・ティー・エス
    • Related Report
      2013 Annual Research Report
  • [Remarks] Outreach 研究成果の紹介

    • URL

      http://www-tph.cheme.kyoto-u.ac.jp/p/taniguch/Activity/Outreach.html

    • Related Report
      2013 Final Research Report
  • [Remarks] 研究代表者のホームページList of Publication

    • URL

      http://www-tph.cheme.kyoto-u.ac.jp/p/taniguch/Activity/ListOfPublication.html

    • Related Report
      2013 Final Research Report
  • [Remarks] Outreach 研究成果の紹介

    • URL

      http://www-tph.cheme.kyoto-u.ac.jp/p/taniguch/Activity/Outreach.html

    • Related Report
      2013 Annual Research Report
  • [Remarks] 研究代表者(谷口貴志)のホームページ List of Publication

    • URL

      http://www-tph.cheme.kyoto-u.ac.jp/p/taniguch/Activity/ListOfPublication.html

    • Related Report
      2013 Annual Research Report

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Published: 2011-04-06   Modified: 2019-07-29  

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