• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Carbohydrate recognition mechanisms of galectins and carbohydrate processing enzymes deduced from X-ray structures

Research Project

Project/Area Number 23370054
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionKagawa University

Principal Investigator

KAMITORI Shigehiro  香川大学, 総合生命科学研究センター, 教授 (00262246)

Co-Investigator(Kenkyū-buntansha) YOSHIDA Hiromi  香川大学, 総合生命科学研究センター, 准教授 (10313305)
NISHI Nozumu  香川大学, 総合生命科学研究センター, 准教授 (10145047)
NAKAKITA Shinichi  香川大学, 総合生命科学研究センター, 准教授 (40314356)
Co-Investigator(Renkei-kenkyūsha) MIYATA Shigeru  中部大学, 応用生物学部, 准教授 (90314913)
HOJO Hironobu  大阪大学, 蛋白質研究所, 教授 (00209214)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥19,760,000 (Direct Cost: ¥15,200,000、Indirect Cost: ¥4,560,000)
Fiscal Year 2013: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2012: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2011: ¥8,060,000 (Direct Cost: ¥6,200,000、Indirect Cost: ¥1,860,000)
KeywordsX線結晶解析 / 糖鎖 / 糖鎖結合タンパク質 / ガレクチン / ヘマグルチニン / エンドライシン / ウェルシュ菌 / ボツリヌス菌 / ペプチドグリカン / X線結晶解析 / 糖鎖プロセッシング酵素 / グリコシド結合
Research Abstract

Cell surface oligosaccharides are involved in immune responses and bacterial/viral infections, and they are specifically recognized by carbohydrate-binding proteins. X-ray structures of the complexes of carbohydrate-binding proteins with the target oligosaccharides have been determined to elucidate the carbohydrate recognition mechanisms. The results of this research project give new insights into the carbohydrate recognition mechanisms of galectin-8, a hemagglutinin subcomponent of the botulinum neurotoxin, and an endolysin encoded by episomal phage of Clostridium perfringens.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (35 results)

All 2014 2013 2012 2011 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (25 results) Remarks (4 results)

  • [Journal Article] X-ray structure of a novel endolysin encoded by episomal phage phiSM101 of Clostridium perfringens2014

    • Author(s)
      Tamai, E., Yoshida, H., Sekiya, H., Nariya, H., Miyata, S., Okabe, A., Kuwahara, T., Maki, J. & Kamitori, S
    • Journal Title

      Mol. Microbiol

      Volume: 92 Issue: 2 Pages: 326-337

    • DOI

      10.1111/mmi.12559

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Chemoenzymatic synthesis of the immunoglobulin domain of Tim-3 carrying a complex-type N-glycan by using a one-pot ligation. Angew2013

    • Author(s)
      Asahina, Y., Kamitori, S., Takao, T., Nishi, N. & Hojo, H.
    • Journal Title

      Chem. Int

      Volume: 52 Issue: 37 Pages: 9733-9737

    • DOI

      10.1002/anie.201303073

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Self-association of the galectin-9 C-terminal domain via the opposite surface of the sugar-binding site2013

    • Author(s)
      Nonaka, Y., Ogawa, T., Oomizu, S., Nakakita, S., Nishi, N., Kamitori, S., Hirashima, M. & Nakamura, T
    • Journal Title

      J. Biochem

      Volume: 153 Issue: 5 Pages: 463-471

    • DOI

      10.1093/jb/mvt009

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains2012

    • Author(s)
      Yoshida, H., Yamashita, S., Teraoka, M., Itoh, A., Nakakita, S., Nishi, N. & Kamitori, S.
    • Journal Title

      FEBS J

      Volume: 279 Issue: 20 Pages: 3937-3951

    • DOI

      10.1111/j.1742-4658.2012.08753.x

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides2012

    • Author(s)
      Yamashita, S., Yoshida, H., Uchiyama, N., Nakakita, Y., Nakakita, S., Tonozuka, T., Oguma, K., Nishikawa, A. & Kamitori, S
    • Journal Title

      FEBS Lett

      Volume: 586 Issue: 16 Pages: 2404-2410

    • DOI

      10.1016/j.febslet.2012.05.055

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal structures of rare disaccharides, α-D-glucopyranosyl β-D-psicofuranoside, and α-D-galactopyranosyl β-D-psicofuranoside2011

    • Author(s)
      Shigehiro Kamitori, et al
    • Journal Title

      Carbohydr Res

      Volume: 346 Issue: 9 Pages: 1182-1185

    • DOI

      10.1016/j.carres.2011.04.003

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] ウェルシュ菌ファージ由来エンドライシン(Psm)のX線結晶解析2013

    • Author(s)
      神鳥成弘, 吉田裕美, 玉井栄治, 関谷洋志, 牧純
    • Organizer
      平成25年度日本結晶学会年会
    • Place of Presentation
      熊本
    • Related Report
      2013 Final Research Report
  • [Presentation] ヒトガレクチン9変異体のX線構造と糖鎖親和性の解析2013

    • Author(s)
      寺岡美沙, 吉田裕美, 西望, 中北愼一, 神鳥成弘
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      横浜
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] X-ray structure of a stable protease-resistant glectin-9 with short linker2013

    • Author(s)
      Yoshida, H., Nishi, N., Teraoka, M., Yamashita, S & Kamitori, S
    • Organizer
      38th FEBS Congress
    • Place of Presentation
      St. Petersburg (Russia)
    • Related Report
      2013 Final Research Report
  • [Presentation] 安定型ヒト由来ガレクチン9変異体のX線結晶構造解析2013

    • Author(s)
      吉田裕美, 西望, 寺岡美沙, 山下哲, 神鳥成弘
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      鳥取
    • Related Report
      2013 Final Research Report
  • [Presentation] ファージ由来ウェルシュ菌特異的溶菌酵素Psmの触媒ドメインの結晶構造解析2013

    • Author(s)
      吉田裕美, 玉井栄治, 関谷洋志, 牧純, 神鳥成弘
    • Organizer
      2013年度農芸化学会大会
    • Place of Presentation
      仙台
    • Related Report
      2013 Final Research Report
  • [Presentation] 安定型ヒト由来ガレクチン9変異体のX線結晶構造解析2013

    • Author(s)
      吉田裕美,西望,寺岡美沙,山下哲,神鳥成弘
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      鳥取
    • Related Report
      2013 Annual Research Report
  • [Presentation] X-ray structure of a stable protease-resistant glectin-9 with short linker.2013

    • Author(s)
      Yoshida, H., Nishi, N., Teraoka, M., Yamashita, S. & Kamitori, S.
    • Organizer
      38th FEBS Congress
    • Place of Presentation
      St.Petersburg, Russia
    • Related Report
      2013 Annual Research Report
  • [Presentation] ウェルシュ菌ファージ由来エンドライシン(Psm)のX線結晶解析2013

    • Author(s)
      神鳥 成弘,吉田 裕美,玉井 栄治,関谷 洋志,牧 純
    • Organizer
      平成25年度日本結晶学会年会
    • Place of Presentation
      熊本
    • Related Report
      2013 Annual Research Report
  • [Presentation] ファージ由来ウェルシュ菌特異的溶菌酵素Psmの触媒ドメインの結晶構造解析2013

    • Author(s)
      吉田裕美
    • Organizer
      日本農芸化学会大会2013年度大会
    • Place of Presentation
      東北大学(仙台,宮城)
    • Related Report
      2012 Annual Research Report
  • [Presentation] ウエルシュ菌特異的溶菌酵素Psmの酵素活性中心の解析2012

    • Author(s)
      玉井栄治
    • Organizer
      第85回日本細菌学会総会
    • Place of Presentation
      長崎ブリックホール、長崎新聞文化ホール(長崎)
    • Year and Date
      2012-03-29
    • Related Report
      2011 Annual Research Report
  • [Presentation] サルモネラ菌の接着に関与するβ型外膜蛋白質PagCおよびRckの巻戻しと結晶化2012

    • Author(s)
      山下哲, 吉田裕美, 神鳥成弘
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋
    • Related Report
      2013 Final Research Report
  • [Presentation] X-ray structure analysis of a phage endolysin showing specificity for Clostridium perfringens2012

    • Author(s)
      吉田裕美, 玉井栄治, 田所隼人, 成谷宏文, 関谷洋志, 岡部昭延, 牧純, 神鳥成弘
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋
    • Related Report
      2013 Final Research Report
  • [Presentation] X-ray structure analysis of a phage endolysin showing specificity for Clostridium perfringens2012

    • Author(s)
      吉田裕美
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋国際会議場(名古屋,愛知)
    • Related Report
      2012 Annual Research Report
  • [Presentation] サルモネラ菌の接着に関与するβ型外膜蛋白質PagCおよびRckの巻戻しと結晶化2012

    • Author(s)
      山下哲
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋国際会議場(名古屋,愛知)
    • Related Report
      2012 Annual Research Report
  • [Presentation] ウエルシュ菌特異的溶菌酵素Psmの構造と機能解析2011

    • Author(s)
      玉井栄治
    • Organizer
      第64回日本細菌学会中国・四国支部総会
    • Place of Presentation
      岡山大学(岡山)
    • Year and Date
      2011-10-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] タンデムリピート型ガレクチン9のC末側糖鎖認識ドメインの役割について2011

    • Author(s)
      野中康宏
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都)
    • Year and Date
      2011-09-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] ヒトガレクチン8N末端糖鎖認識ドメインと3'-sialyl-N-acetyllactosamine複合体のX線結晶解析2011

    • Author(s)
      寺岡美沙
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都)
    • Year and Date
      2011-09-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] ボツリヌス菌C型神経毒素複合体におけるヘマグルチニンHA3・糖鎖複合体のX線結晶解析2011

    • Author(s)
      山下哲
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都)
    • Year and Date
      2011-09-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] What is real target of galectin-3?2011

    • Author(s)
      Nobumitsu Miyanishi
    • Organizer
      XXI International Symposium on Glycoconjugate
    • Place of Presentation
      University of Vienna (Vienna, Austria)
    • Year and Date
      2011-08-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] プロテアーゼ耐性型ヒト由来ガレクチン8/シアリルラクトース/ラクトース複合体のX線結晶解析によるドメイン間の基質親和性の検討2011

    • Author(s)
      吉田裕美
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      ホテル阪急エキスポパーク(大阪)
    • Year and Date
      2011-06-07
    • Related Report
      2011 Annual Research Report
  • [Presentation] ボツリヌス菌C型神経毒素複合体におけるヘマグルチニンの糖鎖認識機構の構造研究2011

    • Author(s)
      山下哲
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      ホテル阪急エキスポパーク(大阪)
    • Year and Date
      2011-06-07
    • Related Report
      2011 Annual Research Report
  • [Presentation] ボツリヌス菌C型神経毒素複合体におけるヘマグルチニンHA3・糖鎖複合体のX線結晶解析2011

    • Author(s)
      山下哲, 吉田裕美, 殿塚隆史, 小熊惠二, 西河淳, 神鳥成弘
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都
    • Related Report
      2013 Final Research Report
  • [Presentation] ヒトガレクチン8N末端糖鎖認識ドメインと3'-sialyl-N-acetyllactosamine複合体のX線結晶解析2011

    • Author(s)
      寺岡美沙, 吉田裕美, 山下哲, 西望, 神鳥成弘
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都
    • Related Report
      2013 Final Research Report
  • [Presentation] プロテアーゼ耐性型ヒト由来ガレクチン8/シアリルラクトース/ラクトース複合体のX線結晶解析によるドメイン間の基質親和性の検討2011

    • Author(s)
      吉田裕美, 西望, 寺岡美沙, 山下哲, 中北愼一, 神鳥成弘
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      大阪
    • Related Report
      2013 Final Research Report
  • [Presentation] ボツリヌス菌C型神経毒素複合体におけるヘマグルチニンの糖鎖認識機構の構造研究2011

    • Author(s)
      山下哲, 吉田裕美, 殿塚隆史, 小熊惠二, 西川淳, 神鳥成弘
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      大阪
    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://www.med.kagawa-u.ac.jp/~xraylab/report/kaken/

    • Related Report
      2013 Final Research Report
  • [Remarks] 科学研究費補助金報告書(神鳥・吉田)

    • URL

      http://www.kms.ac.jp/~xraylab/report/kaken/index.htm

    • Related Report
      2013 Annual Research Report
  • [Remarks] 科学研究費補助金報告書(神鳥・吉田)

    • URL

      http://www.med.kagawa-u.ac.jp/~xraylab/report/kaken/

    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://www.med.kagawa-u.ac.jp/~xraylab/report/kaken/

    • Related Report
      2011 Annual Research Report

URL: 

Published: 2011-04-06   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi