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Study pertaining to the availability of soil-surface rooting for rice cultivation in the Era of Petroleum Scarcity

Research Project

Project/Area Number 23380189
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Boundary agriculture
Research InstitutionTohoku University

Principal Investigator

SATO Tadashi  東北大学, 生命科学研究科, 産学官連携研究員 (40134043)

Co-Investigator(Kenkyū-buntansha) UGA Yusaku  独立行政法人農業生物資源研究所, 農業生物先端ゲノム研究センター, 主任研究員 (00391566)
FUKUTA Yoshimichi  独立行政法人国際農林水産業研究センター, 生物資源・利用領域, プロジェクトリーダー (40399374)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥13,130,000 (Direct Cost: ¥10,100,000、Indirect Cost: ¥3,030,000)
Fiscal Year 2013: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2012: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2011: ¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Keywordsイネ遺伝資源 / 突然変異系統 / 地表根形成 / 問題水田 / 遺伝子単離 / 準同質遺伝系統 / 収量 / 熱帯アジア地域 / 塩害水田 / 整粒歩合 / 不良土壌環境 / 量的遺伝子座解析 / 環境ストレス耐性
Research Abstract

We clarified the genetic factors controlling soil-surface rooting by using recombinant inbred lines derived from a cross between Gemdjah Beton, an Indonesian lowland rice cultivar with soil-surface roots, and Sasanishiki, a Japanese lowland rice cultivar without soil-surface roots. We identified a major genetic factor on long arm of chromosome 7, and then designated this QTL qSOR1 (Uga et al. 2011).
We found a soil-surface rooting mutant from an M2 population that was regenerated from seed calli of a japonica rice cultivar, Nipponbare. The sor1, a rice mutant causing soil-surface rooting and altered root gravitropic response, is allelic to Os04g0101800 on the terminal region of the short arm of chromosome 4. The 33-bp deletion is responsible for the mutant phenotypes (Hanzawa et al. 2013). The result of cultivation trial by using this mutant suggest that the soil-surface rooting may be useful for increasing tolerance to some of the problematic soil types such as saline paddy field.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (18 results)

All 2013 2012 2011

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (12 results) Book (3 results)

  • [Journal Article] Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)2013

    • Author(s)
      Hanzawa E. Sasaki K. Nagai S. Obara M. Fukuta Y. Uga Y. Miyao A. Hirochika H. Higashitani A. Maekawa M. Sato T
    • Journal Title

      Rice

      Volume: 6 Pages: 30-30

    • URL

      http://www.thericejournal.com/content/6/1/30

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.).2013

    • Author(s)
      Hanzawa E. Sasaki K. Nagai S. Obara M. Fukuta Y. Uga Y. Miyao A. Hirochika H. Higashitani A. Maekawa M. Sato T.
    • Journal Title

      Rice

      Volume: 6 Pages: 60-60

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields2012

    • Author(s)
      Uga Y., E. Hanzawa, S. Nagai, K. Sasaki, M. Yano, T. Sato
    • Journal Title

      Theoretical and Applied Genetics

      Volume: 124 Issue: 1 Pages: 75-86

    • DOI

      10.1007/s00122-011-1688-3

    • Related Report
      2013 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] Fine mapping for a novel gne for soil-surface rooting in rice (Oryza sativa L.)2013

    • Author(s)
      Hanzawa E., K. Sasaki, M. Obara, Y. Fukuta, Y. Uga, A. Higashitani, M. Maekawa, T. Sato
    • Organizer
      7th International Rice Genetics Symposium
    • Place of Presentation
      マニラ, フィリピン
    • Related Report
      2013 Final Research Report
  • [Presentation] Genetic variation of tolerance for iron toxicity using agar nutrient solution in rice2013

    • Author(s)
      Tomita A., J. Pariasca Tanaka, W. Matthias, Y. Fukuta
    • Organizer
      7th International Rice Genetic Symposium
    • Place of Presentation
      マニラ, フィリピン
    • Related Report
      2013 Final Research Report
  • [Presentation] 寒天添加水耕培地を用いた鉄毒耐性に関するイネ遺伝的変異の解明2013

    • Author(s)
      富田朝美, 福田善通, Wissuwa Matthias
    • Organizer
      日本育種学会講演会
    • Place of Presentation
      東京農業大学
    • Related Report
      2013 Final Research Report
  • [Presentation] Fine mapping for a novel gene for soil-surface rooting in rice (Oryza sativa L.)2013

    • Author(s)
      H. Hanzawa, K. sasaki, M. Obara, Y. Fukuta, Y. Uga, A Higashitani, M. Maekawa, T. Sato
    • Organizer
      7th International Rice Genetics Symposium
    • Place of Presentation
      Manila, Philippones
    • Related Report
      2013 Annual Research Report
  • [Presentation] 寒天添加水耕培地を用いた鉄毒耐性に関するイネ遺伝的変異の解明2013

    • Author(s)
      冨田朝美、福田善通、Wissuwa Matthias
    • Organizer
      日本育種学会講演会
    • Place of Presentation
      東京農業大学、東京
    • Related Report
      2012 Annual Research Report
  • [Presentation] A recessive rice mutant that grows soil-surface roots in paddy field shows the deficiency in gravitational response of primary roots2012

    • Author(s)
      Hanzawa E., K. Sasaki, A. Miyao, H. Hirochika, A Higashitani, M. Maekawa, T. Sato
    • Organizer
      International Symposium on root systems biology
    • Place of Presentation
      Academia Sinica, Taiwan
    • Related Report
      2013 Final Research Report
  • [Presentation] A recessive rice mutant that grows soil-surface roots in paddy field shows the deficiency in gravitational response of primary roots2012

    • Author(s)
      Eiko Hanzawa, Kazuhiro Sasaki, Akio Miyao, Hirohiko Hirochika, Atsushi Higashitani, Masahiko Maekawa, and Tadashi Sato
    • Organizer
      根のシステム生物学国際シンポジウム
    • Place of Presentation
      中央研究院・台北・台湾
    • Related Report
      2012 Annual Research Report
  • [Presentation] qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields. JSRR's 20th Anniversary Symposium 542011

    • Author(s)
      Uga Y., E.Hanzawa, S.Nagai, K.Sasaki, K.Ebana, M.Yano, T Sato
    • Organizer
      第35回根研究集会根研究会創立20周年記念式典・シンポジウム
    • Place of Presentation
      東京大学
    • Year and Date
      2011-11-05
    • Related Report
      2011 Annual Research Report
  • [Presentation] Identification of QTLs for Soil Surface Rooting in Rice2011

    • Author(s)
      Sato T., E.Hanzawa, Y.Uga
    • Organizer
      The 7^<th> Asian Crop Science Association Conference
    • Place of Presentation
      インドネシア・ボゴール
    • Year and Date
      2011-09-27
    • Related Report
      2011 Annual Research Report
  • [Presentation] イネの根の伸長方向に関わる形態評価と多様性2011

    • Author(s)
      半澤栄子, 佐々木和浩, 宇賀優作, 佐藤雅志
    • Organizer
      日本育種学会講演会
    • Place of Presentation
      福井大学
    • Year and Date
      2011-09-24
    • Related Report
      2013 Final Research Report
  • [Presentation] qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields2011

    • Author(s)
      Uga Y., E. Hanzawa, S. Nagai, K. Sasaki, K. Ebana, M. Yano, T. Sato
    • Organizer
      JSRR Synpojium
    • Place of Presentation
      東京大学
    • Related Report
      2013 Final Research Report
  • [Presentation] Identification of genetic factors for soil-surface rooting in rice2011

    • Author(s)
      Sato T., E. Hanzawa, Y. Uga
    • Organizer
      The 7th Asian Crop Science Association Conference
    • Place of Presentation
      ボゴール, インドネシア
    • Related Report
      2013 Final Research Report
  • [Book] 「栽培イネと稲作文化」 佐藤洋一郎・赤坂憲雄編『フィールド科学の入口イネの歴史を探る』2013

    • Author(s)
      佐藤雅志
    • Publisher
      玉川大学出版部
    • Related Report
      2013 Final Research Report
  • [Book] 栽培イネと稲作文化 佐藤洋一郎・赤坂憲雄編『フィールド科学の入口イネの歴史を探る』2013

    • Author(s)
      佐藤雅志
    • Total Pages
      226
    • Publisher
      玉川大学出版部
    • Related Report
      2013 Annual Research Report
  • [Book] 「北部ラオス地域にみる焼畑の終焉とイネ遺伝資源の消失」鞍田崇・原田信男編 『焼畑の環境学 -いま焼畑とは』2011

    • Author(s)
      武藤千秋, 佐藤雅志
    • Publisher
      思文閣出版
    • Related Report
      2013 Final Research Report

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Published: 2011-04-06   Modified: 2019-07-29  

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