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Escherichia coli host engineering for non-biased expression of metagenomic library

Research Project

Project/Area Number 23380197
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Boundary agriculture
Research InstitutionNational Institute of Advanced Industrial Science and Technology

Principal Investigator

MIYAZAKI Kentaro  独立行政法人産業技術総合研究所, 生物プロセス研究部門, 研究グループ長 (60344123)

Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥19,890,000 (Direct Cost: ¥15,300,000、Indirect Cost: ¥4,590,000)
Fiscal Year 2013: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Fiscal Year 2012: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Fiscal Year 2011: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Keywordsメタゲノム / バイオテクノロジー / 大腸菌 / ゲノム育種 / リボソーム工学 / 16S rRNA / 翻訳 / リボソーム / 宿主 / 機能改変 / 遺伝子発現 / 異宿主発現 / レポーターアッセイ / 翻訳開始因子 / 発現バイアス / 進化工学 / 開始コドン
Research Abstract

We have applied translational engineering approach to solve the problem in heterologous expression problem in Escherichia coli. Initiation factor 3 as well as the ribosome was engineered to alter the translational profile and variants that showed enhanced expression of genes having non-AUG initiation codon were identified. Also, mutant ribosome that have 16S rRNA from non-E. coli bacteria showed altered, or enhanced expression of reporter gfp genes, that were not efficiently expressed in wild type E. coli.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (120 results)

All 2014 2013 2012 2011 Other

All Journal Article (26 results) (of which Peer Reviewed: 19 results) Presentation (65 results) (of which Invited: 8 results) Book (16 results) Remarks (6 results) Patent(Industrial Property Rights) (7 results) (of which Overseas: 3 results)

  • [Journal Article] Bacterial cellular engineering by genome editing and gene silencing2014

    • Author(s)
      Nakashima N, Miyazaki K
    • Journal Title

      Int J Mol Sci

      Volume: 15 Pages: 2773-2793

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] 16S rRNAの「水平伝播」-異種16S rRNAによる遺伝的相補-2014

    • Author(s)
      佃 美雪, 佐藤 允治, 宮崎 健太郎
    • Journal Title

      化学と生物

      Volume: 52-2 Pages: 70-72

    • Related Report
      2013 Final Research Report
  • [Journal Article] New insights into the catalytic active-site structure of multicopper oxidases.2014

    • Author(s)
      Komori H, Sugiyama R, Kataoka K, Miyazaki K, Higuchi Y, Sakurai T
    • Journal Title

      Acta Crystallogr D Biol Crystallogr

      Volume: 70 Issue: 3 Pages: 772-779

    • DOI

      10.1107/s1399004713033051

    • NAID

      120005451980

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 16SrRNAの「水平伝播」―異種16SrRNAによる遺伝的相補―2014

    • Author(s)
      宮崎 健太郎、佃 美雪、佐藤 允治
    • Journal Title

      化学と生物

      Volume: 52 Pages: 70-72

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Revisiting bacterial phylogeny : Natural and experimental evidence for horizontal gene transfer of 16S rRNA2013

    • Author(s)
      Kitahara K, Miyazaki K
    • Journal Title

      Mob Genet Elements

      Volume: 3

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Metagenomic screening for aromatic compound-responsive transcriptional regulators2013

    • Author(s)
      Uchiyama T, Miyazaki K
    • Journal Title

      PLOS ONE

      Volume: 8

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of a novel β-glucosidase from a compost microbial metagenome with strong transglycosylation activity2013

    • Author(s)
      Uchiyama T, Miyazaki K, Yaoi K
    • Journal Title

      J Biol Chem

      Volume: 288 Pages: 18325-18334

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cloning, expression and characteristics of a novel alkalistable and thermostable xylanase encoding gene (mxyl) retrieved from compost-soil metagenome2013

    • Author(s)
      Verma D, Kawarabayasi Y, Miyazaki K, Satyanarayana T
    • Journal Title

      PLOS ONE

      Volume: 8

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Directed evolution study unveiling key sequence factors that affect translation efficiency in Escherichia coli2013

    • Author(s)
      Tsukuda M, Miyazaki K
    • Journal Title

      J Biosci Bioeng

      Volume: 116 Pages: 540-545

    • NAID

      110009685200

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] DNA fragmentation caused by an overdose of Zeocin2013

    • Author(s)
      Tsukuda M, Miyazaki K
    • Journal Title

      J Biosci Bioeng

      Volume: 116 Pages: 644-646

    • NAID

      110009685220

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Meeting Report : 1st International Functional Metagenomics Workshop2013

    • Author(s)
      Engel K, Ashby D, Brady SF, Cowan DA, Doemer J, Edwards EA, Fiebig K, Martens EC, McCormac D, Mead DA, Miyazaki K, Moreno-Hagelsieb G, O'Gara F, Reid A, Rose DR, Simonet P, Sjöling S, Smalla K, Streit WR, Tedman-Jones J, Valla S, Wellington EMH, Wu C-C, Liles MR, Neufeld JD, Sessitsch A, Charles TC
    • Journal Title

      St. Jacobs, Ontario, Canada. Stand Genomic Sci

      Volume: 8 Pages: 106-111

    • Related Report
      2013 Final Research Report
  • [Journal Article] Metagenomic screening for aromatic compound-responsive transcriptional regulators.2013

    • Author(s)
      Uciyama T, Miyazaki K
    • Journal Title

      PLoS One

      Volume: 8 Issue: 9 Pages: e75795-e75795

    • DOI

      10.1371/journal.pone.0075795

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DNA fragmentation caused by an overdose of Zeocin.2013

    • Author(s)
      Tsukuda M, Miyazaki K
    • Journal Title

      J Biosci Bioeng

      Volume: 116 Issue: 5 Pages: 644-646

    • DOI

      10.1016/j.jbiosc.2013.05.004

    • NAID

      110009685220

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Directed evolution study unveiling key sequence factors that affect translation. efficiency in Escherichia coli.2013

    • Author(s)
      Tsukuda M, Miyazaki K
    • Journal Title

      J Biosci Bioeng

      Volume: 116 Issue: 5 Pages: 540-545

    • DOI

      10.1016/j.jbiosc.2013.05.013

    • NAID

      110009685200

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of a novel β-glucosidase from a compost microbial metagenome with strong transglycosylation activity.2013

    • Author(s)
      Uchiyama T, Miyazaki K, Yaoi K
    • Journal Title

      J Biol Chem

      Volume: 288 Issue: 25 Pages: 18325-18334

    • DOI

      10.1074/jbc.m113.471342

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Direct electron transfer to a metagenome-derived laccase fused to affinity tags near the electroactive copper site.2013

    • Author(s)
      Tsujimura S, Asahi M, Goda-Tsutsumi M, Shirai O, Kano K, Miyazaki K
    • Journal Title

      Phys Chem Chem Phys

      Volume: 15 Issue: 47 Pages: 20585-20589

    • DOI

      10.1039/c3cp53096e

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Meeting Report: 1st International Functional Metagenomics Workshop May 7–8, 2012, St. Jacobs, Ontario, Canada2013

    • Author(s)
      Engel K, Ashby D, Brady SF, Cowan DA, Doemer J, Edwards EA, Fiebig K, Martens EC, McCormac D, Mead DA, Miyazaki K, Moreno-Hagelsieb G, O'Gara F, Reid A, Rose DR, Simonet P, Sjöling S, Smalla K, Streit WR, Tedman-Jones J, Valla S, Wellington EMH, Wu C-C, Liles MR, Neufeld JD, Sessitsch A, Charles TC
    • Journal Title

      Standards in Genomic Sciences

      Volume: 8 Issue: 1 Pages: 106-111

    • DOI

      10.4056/sigs.3406845

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cloning, expression and characteristics of a novel alkalistable and thermostable xylanase encoding gene (Mxyl) retrieved from compost-soil metagenome.2013

    • Author(s)
      Verma D
    • Journal Title

      PLoS One

      Volume: 8 Issue: 1 Pages: e52459-e52459

    • DOI

      10.1371/journal.pone.0052459

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mutational robustness of 16S ribosomal RNA, shown by experimental horizontal gene transfer in Escherichia coli2012

    • Author(s)
      Kitahara K, Yasutake Y, Miyazaki K
    • Journal Title

      Proc Natl Acad Sci USA

      Volume: 109 Pages: 19200-19225

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] リボソームに翻訳以外の機能を発見2012

    • Author(s)
      宮崎 健太郎
    • Journal Title

      産総研TODAY

      Volume: 12 Pages: 20-20

    • Related Report
      2013 Final Research Report
  • [Journal Article] Mutational robustness of 16S ribosomal RNA, shown by experimental horizontal gene transfer in Escherichia coli.2012

    • Author(s)
      Kitahara K
    • Journal Title

      Proc Natl Acad Sci USA

      Volume: 109 Issue: 47 Pages: 19220-19225

    • DOI

      10.1073/pnas.1213609109

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] リボソームに翻訳以外の機能がある ―リボヌクレアーゼ作用阻害2012

    • Author(s)
      宮崎健太郎
    • Journal Title

      生体の科学

      Volume: 63 Pages: 356-357

    • Related Report
      2012 Annual Research Report
  • [Journal Article] リボソームに翻訳以外の機能を発見:16S rRNA ヘリックス41によるリボヌクレアーゼT2の阻害2012

    • Author(s)
      宮崎健太郎
    • Journal Title

      産総研TODAY

      Volume: 12 Pages: 20-20

    • Related Report
      2012 Annual Research Report
  • [Journal Article] Specific inhibition of bacterial RNase T2 by helix 41 of 16S ribosomal RNA2011

    • Author(s)
      Kitahara K, Miyazaki K
    • Journal Title

      Nat Commun

      Volume: 2 Issue: 1 Pages: 549-549

    • DOI

      10.1038/ncomms1553

    • Related Report
      2013 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] メタゲノムからの有用酵素の探索2011

    • Author(s)
      宮崎 健太郎
    • Journal Title

      月刊 Bio Industry

      Volume: 28 Pages: 32-38

    • Related Report
      2013 Final Research Report
  • [Journal Article] メタゲノムからの有用酵素の探索2011

    • Author(s)
      宮崎健太郎
    • Journal Title

      月刊BioIndustry

      Volume: 28 Pages: 32-38

    • Related Report
      2011 Annual Research Report
  • [Presentation] Ribosomal RNA の人工水平伝播による大腸菌宿主デザイン2014

    • Author(s)
      宮崎 健太郎
    • Organizer
      日本農芸化学会大会 2014
    • Place of Presentation
      神奈川県
    • Year and Date
      2014-03-29
    • Related Report
      2013 Final Research Report
  • [Presentation] メタゲノム手法は培養法を凌駕するのか : 遺伝子資源取得に際しての手法間の比較2014

    • Author(s)
      末永 光, 水田 志織, 宮崎 健太郎, 矢追 克郎
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      神奈川県
    • Year and Date
      2014-03-28
    • Related Report
      2013 Final Research Report
  • [Presentation] 腸内細菌目の16S rRNAの網状進化2014

    • Author(s)
      佐藤 允治, 宮崎 健太郎
    • Organizer
      第8回日本ゲノム微生物学会年会
    • Place of Presentation
      東京都
    • Year and Date
      2014-03-07
    • Related Report
      2013 Final Research Report
  • [Presentation] Functional metagenomics and Escherichia coli host engineering for efficient enzyme discovery2014

    • Author(s)
      宮崎 健太郎
    • Organizer
      Kasetsart university Seminar
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2014-02-21
    • Related Report
      2013 Final Research Report
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2014

    • Author(s)
      宮崎 健太郎
    • Organizer
      AMBC2014
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2014-02-20
    • Related Report
      2013 Final Research Report
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2014

    • Author(s)
      Miyazaki K
    • Organizer
      AMBC 2014
    • Place of Presentation
      Bangkok International Trade & Exhibition Centre (Bangkok, Thailand)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2014

    • Author(s)
      Miyazaki K
    • Organizer
      Kasetsart University Seminar
    • Place of Presentation
      Kasetsart University (Bangkok,Thailand)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] メタゲノム手法は培養法を凌駕するのか:遺伝子資源取得に際しての手法間の比較2014

    • Author(s)
      末永 光、水田 志織、宮崎 健 太郎、矢追 克郎
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学(神奈川県川崎市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] リボソーマルRNAの人工水平伝播による大腸菌宿主デザイン2014

    • Author(s)
      宮崎 健 太郎
    • Organizer
      日本農芸化学会2014年度大会
    • Place of Presentation
      明治大学(神奈川県川崎市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 腸内細菌目の16S rRNAの網状進化2014

    • Author(s)
      佐藤 允治、宮崎 健太郎
    • Organizer
      第8回 日本ゲノム微生物学会年会
    • Place of Presentation
      東京農業大学(東京都世田谷区)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Ribosomal RNA の人工水平伝播による大腸菌宿主デザイン2013

    • Author(s)
      宮崎 健太郎
    • Organizer
      産業微生物の力を深化させる日本の技~育種の最前線~ 我が国独自の起点・技術から
    • Place of Presentation
      東京都
    • Year and Date
      2013-12-17
    • Related Report
      2013 Final Research Report
  • [Presentation] アンチセンス RNA を用いた新規カウンターセレクション技術の開発2013

    • Author(s)
      佃 美雪, 中島 信孝, 宮崎 健太郎
    • Organizer
      細胞を創る研究会 6.0
    • Place of Presentation
      山形県
    • Year and Date
      2013-11-14
    • Related Report
      2013 Final Research Report
  • [Presentation] Ribosomal RNAの人工水平伝播による大腸菌宿主デザイン2013

    • Author(s)
      佃 美雪, 宮崎 健太郎
    • Organizer
      細胞を創る研究会 6.0
    • Place of Presentation
      山形県
    • Year and Date
      2013-11-14
    • Related Report
      2013 Final Research Report
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2013

    • Author(s)
      佃 美雪, 宮崎 健太郎
    • Organizer
      CBI学会2013年大会
    • Place of Presentation
      東京都
    • Year and Date
      2013-10-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2013

    • Author(s)
      宮崎 健太郎
    • Organizer
      Enzyme Engineering XXII Conference
    • Place of Presentation
      富山県
    • Year and Date
      2013-09-24
    • Related Report
      2013 Final Research Report
  • [Presentation] リボソーム工学に基づく大腸菌の宿主機能改変2013

    • Author(s)
      宮崎 健太郎
    • Organizer
      第65回日本生物工学会大会
    • Place of Presentation
      広島県
    • Year and Date
      2013-09-19
    • Related Report
      2013 Final Research Report
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2013

    • Author(s)
      宮崎 健太郎
    • Organizer
      2013 SIMB Annual Meeting
    • Place of Presentation
      San Diego, USA
    • Year and Date
      2013-08-12
    • Related Report
      2013 Final Research Report
  • [Presentation] 大腸菌への遺伝子水平伝播実験により示された 16S rRNA の種間和合性2013

    • Author(s)
      北原 圭, 宮崎 健太郎
    • Organizer
      第10回21世紀大腸菌研究会
    • Place of Presentation
      静岡県
    • Year and Date
      2013-06-20
    • Related Report
      2013 Final Research Report
  • [Presentation] 系統ネットワーク法で見る腸内細菌目 16S rRNA の網状進化2013

    • Author(s)
      佐藤 允治, 宮崎 健太郎
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京都
    • Year and Date
      2013-03-26
    • Related Report
      2013 Final Research Report
  • [Presentation] 16S rRNA 置換変異による大腸菌宿主改良2013

    • Author(s)
      佃 美雪, 宮崎 健太郎
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京都
    • Year and Date
      2013-03-26
    • Related Report
      2013 Final Research Report
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2013

    • Author(s)
      Miyazaki K
    • Organizer
      2013 SIMB Annual Meeting
    • Place of Presentation
      Hotel Sheraton (San Diego, USA)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2013

    • Author(s)
      Miyazaki K
    • Organizer
      Enzyme Engineering XI Conference
    • Place of Presentation
      富山国際会議場(富山県富山市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 大腸菌への遺伝子水平伝播実験により示された16SrRNAの種間和合性2013

    • Author(s)
      北原 圭、宮崎 健太郎
    • Organizer
      第10回 21世紀大腸 菌研究会
    • Place of Presentation
      ホテル大観(静岡県伊豆市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 枯草菌グルコマンナンオペロンを利用したセルラーゼの探索方法2013

    • Author(s)
      劉 生浩, 五十嵐一暁, 尾崎克也, 矢追 克郎, 宮崎 健太郎
    • Organizer
      第27回セルラーゼ研究会
    • Place of Presentation
      花王霞ヶ浦研修所(茨城県稲敷郡)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 生成物阻害を受けないβ―グルコシダーゼの性状解析2013

    • Author(s)
      内山拓, 宮崎 健太郎, 矢追 克郎
    • Organizer
      第27回セルラーゼ研究会
    • Place of Presentation
      花王霞ヶ浦研修所(茨城県稲敷郡)
    • Related Report
      2013 Annual Research Report
  • [Presentation] メタゲノム由来新規β―グルコシダーゼの性状解析2013

    • Author(s)
      内山拓, 宮崎 健太郎, 矢追 克郎
    • Organizer
      日本応用糖質科学会平成25年度大会
    • Place of Presentation
      鹿児島大学(鹿児島県鹿児島市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Escherichia coli host engineering for efficient enzyme discovery2013

    • Author(s)
      佃 美雪、宮崎 健太郎
    • Organizer
      CBI学会2013年大会
    • Place of Presentation
      タワーホール船堀(東京都江戸川区)
    • Related Report
      2013 Annual Research Report
  • [Presentation] アンチセンスRNAを用いた新規カウンターセレクション技術の開発2013

    • Author(s)
      佃 美雪、中島 信孝、宮崎 健太郎
    • Organizer
      細胞を創る研究会6.0
    • Place of Presentation
      慶応大学(山形県鶴岡市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] RibosomalRNAの人工水平伝播による大腸菌宿主デザイン2013

    • Author(s)
      佃 美雪、宮崎 健太郎
    • Organizer
      細胞を創る研究会6.0
    • Place of Presentation
      慶応大学(山形県鶴岡市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Ribosomal RNAの人工水平伝播による大腸菌宿主デザイン2013

    • Author(s)
      宮崎 健太郎
    • Organizer
      バイオインダストリー協会シンポジウム 産業微生物の力を深化させる日本の技~育種の最前線~ 我が国独自の起点・技術から
    • Place of Presentation
      東京大学(東京都文京区)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] リボソーム工学に基づく大腸菌の宿主機能改変2013

    • Author(s)
      宮崎 健太郎
    • Organizer
      第65回 日本生物工学会大会
    • Place of Presentation
      広島国際会議場(広島県広島市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 系統ネットワーク法で見る腸内細菌目16S rRNAの網状進化2013

    • Author(s)
      佐藤允治
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京農工大学(東京都)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 16S rRNA置換変異による大腸菌宿主改良2013

    • Author(s)
      佃美雪
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京農工大学(東京都)
    • Related Report
      2012 Annual Research Report
  • [Presentation] メタゲノム由来新奇βーグルコシダーゼの性状解析2013

    • Author(s)
      内山拓
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学(宮城県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] β-グルコシダーゼのグルコース阻害耐性と基質特異性における構造基盤2013

    • Author(s)
      城俊徳
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学(宮城県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 16S rRNA の置換変異による大腸菌宿主デザイン2012

    • Author(s)
      佃 美雪, 宮崎 健太郎
    • Organizer
      「細胞を創る」研究会 5.0
    • Place of Presentation
      神奈川県
    • Year and Date
      2012-11-21
    • Related Report
      2013 Final Research Report
  • [Presentation] メタゲノムからの有用遺伝子探索2012

    • Author(s)
      宮崎 健太郎
    • Organizer
      次世代シーケンス東京セミナー・メタゲノムセミナー
    • Place of Presentation
      東京都
    • Year and Date
      2012-10-25
    • Related Report
      2013 Final Research Report
  • [Presentation] 16SリボソームRNAのへリックス41はリボヌクレアーゼIの特異的インヒ ビターである2012

    • Author(s)
      北原 圭, 宮崎 健太郎
    • Organizer
      第9回21世紀大腸菌研究会
    • Place of Presentation
      滋賀県
    • Year and Date
      2012-06-21
    • Related Report
      2013 Final Research Report
  • [Presentation] Functional screening strategy2012

    • Author(s)
      宮崎 健太郎
    • Organizer
      International Functional Metagenomics Workshop
    • Place of Presentation
      Waterloo, Canada
    • Year and Date
      2012-05-07
    • Related Report
      2013 Final Research Report
  • [Presentation] Functional screening strategy2012

    • Author(s)
      宮崎健太郎
    • Organizer
      International Functional Metagenomics Workshop
    • Place of Presentation
      Stone Crock(カナダ)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] メタゲノムからの有用遺伝子探索2012

    • Author(s)
      宮崎健太郎
    • Organizer
      次世代シーケンス東京セミナー・メタゲノムセミナー
    • Place of Presentation
      秋葉原UDX(東京都)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 16SリボソームRNA のへリックス41はリボヌクレアーゼ I の特異的インヒビターである2012

    • Author(s)
      北原圭
    • Organizer
      第9回 21世紀大腸菌研究会
    • Place of Presentation
      長浜バイオ大学(滋賀県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] メタゲノム由来GH1β-グルコシダーゼTd-2F2のグルコース阻害耐性の構造基盤2012

    • Author(s)
      城俊徳
    • Organizer
      日本応用糖質科学会平成24年度大会
    • Place of Presentation
      東京農工大学(東京都)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 16S rRNAの置換変異による大腸菌宿主デザイン2012

    • Author(s)
      佃美雪
    • Organizer
      「細胞を創る」研究会5.0
    • Place of Presentation
      東京工業大学(神奈川県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] メタゲノムからの酵素探索2011

    • Author(s)
      宮崎 健太郎
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      神奈川県
    • Year and Date
      2011-12-13
    • Related Report
      2013 Final Research Report
  • [Presentation] メタゲノムからの酵素探索2011

    • Author(s)
      宮崎健太郎
    • Organizer
      日本分子生物学会
    • Place of Presentation
      パシフィコ横浜(神奈川県)(招待講演)
    • Year and Date
      2011-12-13
    • Related Report
      2011 Annual Research Report
  • [Presentation] リボソーム改変を起点とした微生物システム機能の理解に向けて2011

    • Author(s)
      宮崎 健太郎
    • Organizer
      第10回微生物研究会
    • Place of Presentation
      千葉県
    • Year and Date
      2011-11-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Diversification of cellular phenotype through ribosome engineering in Escherichia coli2011

    • Author(s)
      佃 美雪, 北原 圭, 宮崎 健太郎
    • Organizer
      第10回微生物研究会
    • Place of Presentation
      千葉県
    • Year and Date
      2011-11-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Diversification of cellular phenotype through ribosome engineering in Escherichia coli2011

    • Author(s)
      佃美雪
    • Organizer
      微生物研究会
    • Place of Presentation
      千葉大学(千葉県)
    • Year and Date
      2011-11-12
    • Related Report
      2011 Annual Research Report
  • [Presentation] リボソーム改変を起点とした微生物システム機能の理解に向けて2011

    • Author(s)
      宮崎健太郎
    • Organizer
      微生物研究会
    • Place of Presentation
      千葉大学(千葉県)(招待講演)
    • Year and Date
      2011-11-12
    • Related Report
      2011 Annual Research Report
  • [Presentation] Creation and evolution of insertional fusion protein2011

    • Author(s)
      宮崎 健太郎
    • Organizer
      細胞を創る研究会 4.0
    • Place of Presentation
      大阪府
    • Year and Date
      2011-10-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Diversification of cellular phenotype through ribosome engineering in Escherichia coli2011

    • Author(s)
      佃 美雪, 北原 圭, 宮崎 健太郎
    • Organizer
      細胞を創る研究会4.0
    • Place of Presentation
      大阪府
    • Year and Date
      2011-10-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Diversification of cellular phenotype through ribosome engineering in Escherichia coli2011

    • Author(s)
      佃美雪
    • Organizer
      細胞を創る研究会4.0
    • Place of Presentation
      千里ライフサイエンスセンター(大阪府)
    • Year and Date
      2011-10-27
    • Related Report
      2011 Annual Research Report
  • [Presentation] Diversification of cellular phenotype through ribosome engineering in Escherichia coli2011

    • Author(s)
      佃 美雪, 北原 圭, 宮崎 健太郎
    • Organizer
      International Symposium on SYNTHESIZING LIFE AND BIOLOGICAL SYSTEMS
    • Place of Presentation
      大阪府
    • Year and Date
      2011-10-25
    • Related Report
      2013 Final Research Report
  • [Presentation] Diversification of cellular phenotype through ribosome engineering in Escherichia coli2011

    • Author(s)
      佃美雪
    • Organizer
      International Symposium On Synthesizing Life and Biological Systems
    • Place of Presentation
      千里ライフサイエンスセンター(大阪府)
    • Year and Date
      2011-10-25
    • Related Report
      2011 Annual Research Report
  • [Presentation] PIGEX 法のハイスループット化の検討2011

    • Author(s)
      内山 拓, 宮崎 健太郎
    • Organizer
      日本生物工学会大会
    • Place of Presentation
      東京
    • Year and Date
      2011-09-27
    • Related Report
      2013 Final Research Report
  • [Presentation] メタゲノムを活用した新規酵素の探索2011

    • Author(s)
      宮崎 健太郎
    • Organizer
      日本生物工学会
    • Place of Presentation
      愛知県
    • Year and Date
      2011-09-27
    • Related Report
      2013 Final Research Report
  • [Presentation] PIGEX法のハイスループット化の検討2011

    • Author(s)
      内山拓
    • Organizer
      日本生物工学会
    • Place of Presentation
      東京農工大学(東京都)
    • Year and Date
      2011-09-27
    • Related Report
      2011 Annual Research Report
  • [Presentation] メタゲノムを活用した新規酵素の探索2011

    • Author(s)
      宮崎健太郎
    • Organizer
      日本生物工学会
    • Place of Presentation
      東京農工大学(東京都)(招待講演)
    • Year and Date
      2011-09-27
    • Related Report
      2011 Annual Research Report
  • [Presentation] 進化工学手法による異種蛋白質発現における翻訳律速因子の同定と発現効率化2011

    • Author(s)
      佃 美雪, 宮崎 健太郎
    • Organizer
      日本蛋白質科学会
    • Place of Presentation
      大阪府
    • Year and Date
      2011-06-08
    • Related Report
      2013 Final Research Report
  • [Presentation] 進化工学手法による異種蛋白質発現における翻訳律速因子の同定と発現効率化2011

    • Author(s)
      佃美雪
    • Organizer
      日本蛋白質科学会
    • Place of Presentation
      ホテル阪急(大阪府)
    • Year and Date
      2011-06-08
    • Related Report
      2011 Annual Research Report
  • [Presentation] 進化工学的手法による異種蛋白質発現における発現律速因子の同定と発現効率化2011

    • Author(s)
      美雪, 宮崎 健太郎
    • Organizer
      第8回2世紀大腸菌研究会
    • Place of Presentation
      長野県
    • Year and Date
      2011-05-19
    • Related Report
      2013 Final Research Report
  • [Presentation] 進化工学的手法による異種蛋白質発現における発現律速因子の同定と発現効率化2011

    • Author(s)
      佃美雪
    • Organizer
      21世紀大腸菌研究会
    • Place of Presentation
      ホテル木曽路(長野県)
    • Year and Date
      2011-05-19
    • Related Report
      2011 Annual Research Report
  • [Presentation] 大腸菌翻訳開始因子 IF3 の遺伝子欠損株の作成2011

    • Author(s)
      岡本 玲亜, 宮崎 健太郎
    • Organizer
      21世紀大腸菌研究会
    • Place of Presentation
      長野県
    • Year and Date
      2011-05-18
    • Related Report
      2013 Final Research Report
  • [Presentation] 大腸菌翻訳開始因子IF3の遺伝子欠損株の作成2011

    • Author(s)
      岡本玲亜
    • Organizer
      21世紀大腸菌研究会
    • Place of Presentation
      ホテル木曽路(長野県)
    • Year and Date
      2011-05-18
    • Related Report
      2011 Annual Research Report
  • [Book] Encyclopedia of Metagenomics, extradiol dioxygenases retrieved from the metagenome2014

    • Author(s)
      Suenaga H, Miyazaki K
    • Publisher
      Springer
    • Related Report
      2013 Final Research Report
  • [Book] Diversity and Evolution of Aromatic Degradation Pathway Enzymes in an Activated Sludge2014

    • Author(s)
      Miyazaki K
    • Total Pages
      16
    • Publisher
      Springer Japan
    • Related Report
      2013 Annual Research Report
  • [Book] 進化分子工学の最前線, 生物種を超えた 16S rRNA 遺伝子の機能相補性の解明2013

    • Author(s)
      宮崎 健太郎
    • Publisher
      NTS
    • Related Report
      2013 Final Research Report
  • [Book] Extradiol dioxygenases retrieved from the metagenome2013

    • Author(s)
      Miyazaki K
    • Total Pages
      5
    • Publisher
      Springer-Verlag Berlin Heidelberg
    • Related Report
      2013 Annual Research Report
  • [Book] 生体の科学, リボソームに翻訳以外の機能がある -リボヌクレアーゼ作用阻害2012

    • Author(s)
      宮崎 健太郎
    • Publisher
      医学書院
    • Related Report
      2013 Final Research Report
  • [Book] 生命システム工学, 遺伝子資源の多様化2012

    • Author(s)
      宮崎 健太郎
    • Publisher
      化学同人
    • Related Report
      2013 Final Research Report
  • [Book] 生命システム工学, 進化分子工学の事始2012

    • Author(s)
      宮崎 健太郎
    • Publisher
      化学同人
    • Related Report
      2013 Final Research Report
  • [Book] METAGENOMICS and its applications in agriculture, biomedicine, and environmental studies, Exploring microbial community for novel genetic resources by activity-based screening of a metagenomic library2011

    • Author(s)
      Suenaga H, Miyazaki K
    • Publisher
      Nova Science Publishers
    • Related Report
      2013 Final Research Report
  • [Book] Methods in Enzymology, MEGAWHOP Cloning : A method of creating random mutagenesis libraries via megaprimer PCR of whole plasmids2011

    • Author(s)
      Miyazaki K
    • Publisher
      Elsevier
    • Related Report
      2013 Final Research Report
  • [Book] Metagenomics : Current Innovations and Future Trends, Escherichia coli host engineering for efficient enzyme discovery from metagenome2011

    • Author(s)
      Hosokawa-Okamoto R, Miyazaki K
    • Publisher
      Horizon Press
    • Related Report
      2013 Final Research Report
  • [Book] Handbook of Molecular Microbial Ecology II : Metagenomics in Different Habitats, Novel aromatic degradation pathway genes and their organization as revealed by metagenomic analysis2011

    • Author(s)
      Miyazaki K
    • Publisher
      Wiley/Blackwell
    • Related Report
      2013 Final Research Report
  • [Book] Biodegradative Bacteria, Diversity and evolution of aromatic degradation pathway enzymes in an activated sludge2011

    • Author(s)
      Miyazaki K
    • Publisher
      Springer
    • Related Report
      2013 Final Research Report
  • [Book] Handbok of Molecular Microbial EcologyI : Metagenomics in Diferent Habitat2011

    • Author(s)
      Miyazaki, K.
    • Total Pages
      11
    • Publisher
      Wiley/Blackwell
    • Related Report
      2011 Annual Research Report
  • [Book] Methods in Enzymology Series. Synthetic Biology : Methods for Building and Programming Life2011

    • Author(s)
      Miyazaki, K.
    • Total Pages
      8
    • Publisher
      Elsevier
    • Related Report
      2011 Annual Research Report
  • [Book] Metagenomics : Current Innovations and Future Trends2011

    • Author(s)
      Okamoto-Hosokawa, R.
    • Total Pages
      12
    • Publisher
      Horizon Press
    • Related Report
      2011 Annual Research Report
  • [Book] Metagenomics andits aplications in agriculture, biomedicine, and environmental studies2011

    • Author(s)
      Suenaga, H.
    • Total Pages
      13
    • Publisher
      Nova Science Publisher
    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      https://staff.aist.go.jp/miyazaki-kentaro/group/index.html

    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      https://unit.aist.go.jp/bpri/bpri-synthe/index.html

    • Related Report
      2013 Final Research Report
  • [Remarks] 産総研 生物プロセス研究部門 合成生物工学研究グループ

    • URL

      https://staff.aist.go.jp/miyazaki-kentaro/group/index.html

    • Related Report
      2013 Annual Research Report
  • [Remarks] 合成生物工学研究グループ【生物プロセス研究部門】

    • URL

      https://unit.aist.go.jp/bpri/bpri-synthe/

    • Related Report
      2013 Annual Research Report
  • [Remarks] 生物種を越えた16S rRNA遺伝子の機能相補性を確認

    • URL

      http://www.aist.go.jp/aist_j/press_release/pr2012/pr20121030/pr20121030.html

    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://staff.aist.go.jp/miyazaki-kentaro/group/index.html

    • Related Report
      2011 Annual Research Report
  • [Patent(Industrial Property Rights)] 新規なカウンターセレクション法2013

    • Inventor(s)
      佃 美雪, 中島 信孝, 宮崎 健太郎
    • Industrial Property Rights Holder
      佃 美雪, 中島 信孝, 宮崎 健太郎
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2013-226229
    • Filing Date
      2013-10-31
    • Related Report
      2013 Final Research Report
  • [Patent(Industrial Property Rights)] 酵素遺伝子スクリーニング法2013

    • Inventor(s)
      内山拓, 宮崎 健太郎
    • Industrial Property Rights Holder
      内山拓, 宮崎 健太郎
    • Industrial Property Rights Type
      特許
    • Acquisition Date
      2013-11-01
    • Related Report
      2013 Final Research Report
  • [Patent(Industrial Property Rights)] 翻訳特性の改変された大腸菌2013

    • Inventor(s)
      宮崎健太郎、佃美雪
    • Industrial Property Rights Holder
      産業技術総合研究所
    • Industrial Property Rights Type
      特許
    • Filing Date
      2013-03-13
    • Related Report
      2012 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 翻訳特性の改変された大腸菌2012

    • Inventor(s)
      宮崎 健太郎, 佃 美雪
    • Industrial Property Rights Holder
      宮崎 健太郎, 佃 美雪
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2012-102128
    • Filing Date
      2012-04-27
    • Related Report
      2013 Final Research Report
  • [Patent(Industrial Property Rights)] 翻訳特性の改変された大腸菌2012

    • Inventor(s)
      宮崎 健太郎, 佃 美雪
    • Industrial Property Rights Holder
      宮崎 健太郎, 佃 美雪
    • Industrial Property Rights Type
      特許
    • Filing Date
      2012-03-16
    • Related Report
      2013 Final Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 翻訳特性の改変された大腸菌2012

    • Inventor(s)
      宮崎健太郎、佃美雪
    • Industrial Property Rights Holder
      産業技術総合研究所
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2012-102128
    • Filing Date
      2012-04-27
    • Related Report
      2012 Annual Research Report
  • [Patent(Industrial Property Rights)] 翻訳特性の改変された大腸菌2012

    • Inventor(s)
      宮崎健太郎, 佃美雪
    • Industrial Property Rights Holder
      独立行政法人産業技術総合研究所
    • Filing Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
    • Overseas

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Published: 2011-04-06   Modified: 2019-07-29  

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