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Elucidation of mechanisms governing selectable expression of chloroplast genes and its application to plant improvement

Research Project

Project/Area Number 23380205
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied molecular and cellular biology
Research InstitutionUniversity of Shizuoka

Principal Investigator

KOBAYASHI Hirokazu  静岡県立大学, 大学院食品栄養環境科学研究院, 教授 (80170348)

Co-Investigator(Renkei-kenkyūsha) SHIMIZU Masanori  常葉大学, 健康プロデュース学部, 講師 (40468236)
KAWASHIMA Hiroto  静岡県立大学, 薬学部, 准教授 (50260336)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥20,020,000 (Direct Cost: ¥15,400,000、Indirect Cost: ¥4,620,000)
Fiscal Year 2013: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2012: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2011: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Keywordsシグナル伝達 / 転写制御 / タンパク質リン酸化 / 葉緑体 / 植物
Research Abstract

Gene expression in chloroplasts was selectively switched off by the modification of sigma factor 1 (SIG1). We performed genome-wide screening of Arabidopsis cDNA clones by in vitro detection of protein-protein interaction, followed by phosphorylation assay, resulting in identification of some SIG-one protein kinases (SOPKs). Under lighting conditions that preferentially excited PS I, expression profiles of the psaA gene for the reaction center protein of PS I in SOPK-knockout (KO) lines, were consistent with SIG1 being in its unphosphorylated state. Employment of GFP fused with these SOPKs revealed their localization in the cytosol. SIG-one protein phosphatase (SOPH) candidate genes were tried to be identified by similar strategies. This "light switch" was further employed for chloroplast engineering. On the other hand, "gyokuro" green tea enriched with amino acids, is made of tea leaves grown under a light-shaded condition. Such leaves were subjected to transcriptomic analysis.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (46 results)

All 2014 2013 2012 2011 Other

All Journal Article (3 results) (of which Peer Reviewed: 1 results) Presentation (36 results) (of which Invited: 9 results) Book (3 results) Remarks (2 results) Patent(Industrial Property Rights) (2 results)

  • [Journal Article] Production of hybrid-IgG/IgA plantibodies with neutralizing activity against Shiga toxin 12013

    • Author(s)
      K. Nakanishi, S. Narimatsu, S. Ichikawa, Y. Tobisawa, K. Kurohane, Y. Niwa, H. Kobayashi, Y. Imai
    • Journal Title

      PLOS ONE

      Volume: 8

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Establishment of a tea custom array based on EST data obtained with next-generation sequencing2013

    • Author(s)
      Y. Niwa., S. Watanabe, T. Ogawa, H. Nagasaki, Y. Nakamura, H. Nishimura, T. Hirayama, E. Kobayashi, Y. Nakamura, H. Kobayashi
    • Journal Title

      Proceedings of "The 5th International Conference on O-CHA (Tea) Culture and Science, ICOS 2013"

      Volume: PRP-34

    • Related Report
      2013 Final Research Report
  • [Journal Article] Establishment of a tea custom array based on EST data obtained with next-generation sequencing2013

    • Author(s)
      Y. Niwa., S. Watanabe, T. Ogawa, H. Nagasaki, Y. Nakamura, H. Nishimura, T. Hirayama, E. Kobayashi, Y. Nakamura, and H. Kobayashi
    • Journal Title

      Proceedings of “The 5th International Conference on O-CHA (Tea) Culture and Science, ICOS 2013"

      Volume: 2013

    • Related Report
      2013 Annual Research Report
  • [Presentation] カスタムマイクロアレイを用いたチャ光制御遺伝子の発現解析2014

    • Author(s)
      丹羽康夫, 西村秀希, 平山隆志, 澤田有司, 平井優美, 長崎英樹, 中村保一, 小林栄人, 渡辺祥子, 小川剛史, 中村順行, 小林裕和
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山
    • Related Report
      2013 Final Research Report
  • [Presentation] A protein phosphatase involved in light-regulated expression of photosynthesis genes in Arabidopsis chloroplasts2014

    • Author(s)
      P. Chuenwarin, A. Shimazaki, M. Shimizu, M. Katsumata, H. Kobayashi
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山
    • Related Report
      2013 Final Research Report
  • [Presentation] 動物神経系CRIPT と相同なシロイヌナズナ緑化抑制タンパク質2014

    • Author(s)
      青木亮裕, 清水正則, 澤崎達也, 小林裕和
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山
    • Related Report
      2013 Final Research Report
  • [Presentation] A protein phosphatase involved in light-regulated expression of photosynthesis genes in Arabidopsis chloroplasts2014

    • Author(s)
      P. Chuenwarin, 島崎あづみ, 清水正則, 勝又政和, 小林裕和
    • Organizer
      第55回 日本植物生理学会年会
    • Place of Presentation
      富山
    • Related Report
      2013 Annual Research Report
  • [Presentation] カスタムマイクロアレイを用いたチャ光制御遺伝子の発現解析2014

    • Author(s)
      丹羽康夫,西村秀希, 平山隆志, 澤田有司, 平井優美, 長崎英樹, 中村保一, 小林栄人, 渡辺祥子, 小川剛史, 中村順行, 小林裕和
    • Organizer
      第55回 日本植物生理学会年会
    • Place of Presentation
      富山
    • Related Report
      2013 Annual Research Report
  • [Presentation] 太陽エネルギー依存物質生産系である植物 「葉緑体」 のエンジニアリング2013

    • Author(s)
      小林裕和
    • Organizer
      中部公立3大学 新技術説明会
    • Place of Presentation
      東京
    • Year and Date
      2013-01-25
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Chloroplast biogenesis : Light-induced redox control of gene expression2013

    • Author(s)
      H. Kobayashi
    • Organizer
      Special Seminars (hosted by J.J. Harada, B.B. Buchanan)
    • Place of Presentation
      Univ. California, Davis and Univ. California, Berkeley, Davis and Berkeley, USA
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] タンパク質合成系としての優位性とその活用 ---σ因子キナーゼおよびbHLH 標的DNA の探索2013

    • Author(s)
      小林裕和, 清水正則, 澤崎達也
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] チャの遺伝子の多くはブドウの遺伝子と最もよく似ていた2013

    • Author(s)
      丹羽康夫, 長崎英樹, 中村保一, 西村秀希, 平山隆志, 小林栄人, 渡辺祥子, 小川剛史, 中村順行, 小林裕和
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Final Research Report
  • [Presentation] Establishment of a tea custom array based on EST data obtained with nextgeneration sequencing2013

    • Author(s)
      Y. Niwa, S. Watanabe, T. Ogawa, H. Nagasaki, Y. Nakamura, H. Nishimura, T. Hirayama, E. Kobayashi, Y. Nakamura, H. Kobayashi
    • Organizer
      The 5th International Conference on O-CHA (Tea) Culture and Science
    • Place of Presentation
      静岡
    • Related Report
      2013 Final Research Report
  • [Presentation] 高速シークエンサを用いたチャ葉由来EST の解析2013

    • Author(s)
      丹羽康夫, 渡辺祥子, 小川剛史, 中村順行, 小林栄人, 長崎英樹, 中村保一, 小林裕和
    • Organizer
      日本植物学会第77回大会
    • Place of Presentation
      札幌
    • Related Report
      2013 Final Research Report
  • [Presentation] 葉緑体における光色依存遺伝子発現 「光スイッチ」2013

    • Author(s)
      山本峻資, 清水正則, 小林裕和
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2013 Final Research Report
  • [Presentation] Phosphorylation mechanisms of σ factor for light-regulated transcription in chloroplasts2013

    • Author(s)
      P. Chuenwarin, A. Kato, M. Shimizu, T. Sawasaki, H. Kobayashi
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2013 Final Research Report
  • [Presentation] Chloroplast biogenesis: Light-induced redox control of gene expression2013

    • Author(s)
      H. Kobayashi
    • Organizer
      Special Seminar (hosted by J.J. Harada and B.B. Buchanan), UC Davis and UC Berkeley
    • Place of Presentation
      Davis and Berkeley, USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] Establishment of a tea custom array based on EST data obtained with next-generation sequencing2013

    • Author(s)
      Y. Niwa., S. Watanabe, T. Ogawa, H. Nagasaki, Y. Nakamura, H. Nishimura, T. Hirayama, E. Kobayashi, Y. Nakamura, and H. Kobayashi
    • Organizer
      The 5th International Conference on O-CHA (Tea) Culture and Science
    • Place of Presentation
      静岡
    • Related Report
      2013 Annual Research Report
  • [Presentation] 高速シークエンサを用いたチャ葉由来ESTの解析2013

    • Author(s)
      丹羽康夫, 渡辺祥子, 小川剛史, 中村順行, 小林栄人, 長崎英樹, 中村保一, 小林裕和
    • Organizer
      日本植物学会 第77回大会
    • Place of Presentation
      札幌
    • Related Report
      2013 Annual Research Report
  • [Presentation] チャの遺伝子の多くはブドウの遺伝子と最もよく似ていた2013

    • Author(s)
      丹羽康夫, 長崎英樹, 中村保一, 西村秀希, 平山隆志, 小林栄人, 渡辺祥子, 小川剛史, 中村順行, 小林裕和
    • Organizer
      第36回 日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Annual Research Report
  • [Presentation] Phosphorylation Mechanisms of σ Factor for Light- Regulated Transcription in Chloroplasts2013

    • Author(s)
      P. Chuenwarin
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2012 Annual Research Report
  • [Presentation] 葉緑体における光色依存遺伝子発現「光スイッチ」2013

    • Author(s)
      小林裕和
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2012 Annual Research Report
  • [Presentation] タンパク質合成系としての優位性とその活用 --- σ因子キナーゼおよびbHLH標的DNAの探索2013

    • Author(s)
      小林裕和
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Light-regulated adjustment of photosystem stoichiometry via phosphorylation status of sigma factor in chloroplasts2012

    • Author(s)
      H. Kobayashi, M. Shimizu
    • Organizer
      Annual Main Meeting, Society for Experimental Biology
    • Place of Presentation
      Salzburg, Austria
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Enrichment and evaluation of flavonoids in plants treated with LED and engineered with all plant-derived genes2012

    • Author(s)
      H. Kobayashi
    • Organizer
      The The 10th China-Japan International Symposium on Health Sciences
    • Place of Presentation
      杭州, 中国
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] ヤブキタ茶のカテキン合成酵素遺伝子2012

    • Author(s)
      渡辺祥子, 小川剛史, 小林栄人, 中村順行, 小林裕和, 丹羽康夫
    • Organizer
      第17回日本フードファクター学会学術集会・第9回日本カテキン学会 合同大会
    • Place of Presentation
      静岡
    • Related Report
      2013 Final Research Report
  • [Presentation] 葉緑体への分化制御因子の同定とその起源2012

    • Author(s)
      丹羽康夫, 荻野彰子, 影島宏紀, 後藤新悟, 柴田考世, 小林裕和
    • Organizer
      第24回高遠・分子細胞生物学シンポジウム
    • Place of Presentation
      長野
    • Related Report
      2013 Final Research Report
  • [Presentation] 遅延蛍光による非破壊的光合成評価法のシロイヌナズナへの活用2012

    • Author(s)
      島崎あづみ, P. Chuenwarin, 清水正則, 小林祐子, 勝又政和, 小林裕和
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都
    • Related Report
      2013 Final Research Report
  • [Presentation] Light-regulated adjustment of photosystem stoichiometry via phosphorylation status of sigma factor in chloroplasts.2012

    • Author(s)
      H. Kobayashi
    • Organizer
      Annual Main Meeting, Society for Experimental Biology
    • Place of Presentation
      Salzburg, Austria
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 緑体への分化制御因子の同定とその起源/Identification of chloroplast differentiation factor and its origin2012

    • Author(s)
      丹羽康夫
    • Organizer
      第24回 高遠・分子細胞生物学シンポジウム
    • Place of Presentation
      長野
    • Related Report
      2012 Annual Research Report
  • [Presentation] 遅延蛍光による非破壊的光合成評価法のシロイヌナズナへの活用/Nondestructive evaluation of photosynthesis by delayed fluorescence in Arabidopsis.2012

    • Author(s)
      小林裕和
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都
    • Related Report
      2011 Annual Research Report
  • [Presentation] Regulation in biogenesis of the chloroplast, an intracellular compartment, for production of foods and nutraceutical compounds2011

    • Author(s)
      P. Chuenwarin, A. Kato, M. Shimizu, Y. Kobayashi, M. Katsumata, H. Kobayashi
    • Organizer
      The 4th International Conference on Health and Longevity Sciences
    • Place of Presentation
      静岡
    • Year and Date
      2011-10-21
    • Related Report
      2013 Final Research Report
  • [Presentation] Chloroplast biogenesis : Light switch and internal factors for expression of plastid and nuclear genes2011

    • Author(s)
      H. Kobayashi
    • Organizer
      Special Seminars (hosted by J. Narangajavana, A. Incharoensakdi), Mahidol Univ. and Chulalongkorn Univ
    • Place of Presentation
      Bangkok, Thailand
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Chloroplast biogenesis : Light switch and internal factors for expression of plastid and nuclear genes2011

    • Author(s)
      H. Kobayashi
    • Organizer
      Special Seminars (hosted by R. J. Spreitzer, J.C. Jang), Univ. Nebraska, Lincoln and The Ohio State Univ
    • Place of Presentation
      Lincoln and Columbus, USA
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] カルスの緑化を誘導する分泌型ペプチドCES102 は維管束で発現する2011

    • Author(s)
      荻野彰子, 丹羽康夫, 影島宏紀, 後藤新悟, 小林裕和
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Related Report
      2013 Final Research Report
  • [Presentation] Chloroplast differentiation by a secretory protein2011

    • Author(s)
      Y. Niwa, A. Ogino, H. Kageshima, S. Goto, H. Kobayashi
    • Organizer
      XXIV SPPS Congress 2011
    • Place of Presentation
      Stavanger, Norway
    • Related Report
      2013 Final Research Report
  • [Presentation] Regulation in biogenesis of the chloroplast, an intracellular compartment, for production of foods and nutraceutical compounds.2011

    • Author(s)
      P. Chuenwarin
    • Organizer
      The 4th International Conference on Health and Longevity Sciences
    • Place of Presentation
      Shizuoka, Japan
    • Related Report
      2011 Annual Research Report
  • [Presentation] Chloroplast differentiation by secretory protein.2011

    • Author(s)
      Y. Niwa
    • Organizer
      XXIV SPPS Congress 2011
    • Place of Presentation
      Stavanger, Norway
    • Related Report
      2011 Annual Research Report
  • [Presentation] カルスの緑化を誘導する分泌型ペプチドCES102は維管束で発現する.2011

    • Author(s)
      荻野彰子
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Related Report
      2011 Annual Research Report
  • [Book] 食糧と機能性成分生産のための植物の改良/Engineering of plants for production of provisions and nutraceuticals.「静岡県立大学グローバルCOE プログラム --- 健康長寿科学教育研究の戦略的展開/ Global Center of Excellence for Innovation in Human Health Sciences」2012

    • Author(s)
      小林裕和
    • Related Report
      2013 Final Research Report
  • [Book] Application of mutated acetolactate synthase genes for herbicide resistance to plant improvement. "Herbicides, Theory and Applications" (edited by S. Soloneski, M.L. Larramendy)2011

    • Author(s)
      M. Shimizu, K. Kawai, K. Kaku, T. Shimizu, H. Kobayashi
    • Publisher
      In Tech, Rijeka, Croatia
    • Related Report
      2013 Final Research Report
  • [Book] Application of mutated acetolactate synthase genes for herbicide resistance to plant improvement. "Herbicides, Theory and Applications" (S. Soloneski, and M. L. Larramendy, eds.)2011

    • Author(s)
      M. Shimizu
    • Publisher
      InTech, Rijeka, Croatia
    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://sfns.u-shizuoka-ken.ac.jp/pctech/

    • Related Report
      2013 Final Research Report
  • [Remarks] 静岡県立大学・大学院食品栄養環境科学研究院・植物機能開発研究室

    • URL

      http://sfns.u-shizuoka-ken.ac.jp/pctech/

    • Related Report
      2013 Annual Research Report
  • [Patent(Industrial Property Rights)] 目的遺伝子を発現させるための光学スイッチ用コンストラクト2013

    • Inventor(s)
      小林裕和, 山本峻資, 清水正則
    • Industrial Property Rights Holder
      静岡県公立大学法人
    • Industrial Property Rights Type
      特許
    • Filing Date
      2013-03-13
    • Related Report
      2013 Final Research Report
  • [Patent(Industrial Property Rights)] 目的遺伝子を発現させるための光学スイッチ用コンストラクト2013

    • Inventor(s)
      小林裕和、山本峻資、清水正則
    • Industrial Property Rights Holder
      静岡県公立大学法人
    • Industrial Property Rights Type
      特許
    • Filing Date
      2013-03-13
    • Related Report
      2012 Annual Research Report

URL: 

Published: 2011-04-06   Modified: 2019-07-29  

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