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Molecular mechanisms of genome reprogramming; Somatic cell into pluripotent stem cell

Research Project

Project/Area Number 23390067
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field General medical chemistry
Research InstitutionKyoto University

Principal Investigator

TADA TAKASHI  京都大学, 再生医科学研究所, 准教授 (30188247)

Project Period (FY) 2011-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥19,890,000 (Direct Cost: ¥15,300,000、Indirect Cost: ¥4,590,000)
Fiscal Year 2014: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2013: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2012: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2011: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
KeywordsiPS細胞 / ES細胞 / 多能性幹細胞 / 再プログラム化 / 細胞融合 / エピジェネティクス / Nanog / X染色体 / メチル化 / 再生医学 / 再プログラム
Outline of Final Research Achievements

Reprogramming generates conversion of somatic cell into pluripotent stem cell. Molecular mechanisms of somatic reprogramming is explored by iPS cell induction and cell fusion between somatic and ES cells. Here, we demonstrated function of the Sox2, Nanog, Tet1, and Tet2 genes in reprogramming mechanisms, molecular events in X-chromosome reactivation in reprogramming of female somatic cells, applications of the technique of genome editing in iPS cells, differential response between human and mouse iPS cells to culture under the ground state.

Report

(5 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (36 results)

All 2014 2013 2012 2011 Other

All Journal Article (15 results) (of which Peer Reviewed: 15 results,  Open Access: 4 results,  Acknowledgement Compliant: 3 results) Presentation (8 results) (of which Invited: 3 results) Book (10 results) Remarks (2 results) Patent(Industrial Property Rights) (1 results) (of which Overseas: 1 results)

  • [Journal Article] X Chromosome Reactivation Dynamics Reveal Stages of Reprogramming to Pluripotency2014

    • Author(s)
      Pasque, V., Tchieu, J., Karnik, R., Uyeda, M., Dimashkie, M.S., Case, D., Papp, B., Bonora, G., Patel, S., Ho, R., Schmidt, R., McKee, R., Sado, T., Tada, T., Meissner, A. and Plath, K.
    • Journal Title

      Cell

      Volume: 159 Issue: 7 Pages: 1681-1697

    • DOI

      10.1016/j.cell.2014.11.040

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Nanog co-regulated by Nodal/Smad2 and Oct4 is required for pluripotency in developing mouse epiblast2014

    • Author(s)
      Sun, L.T., Yamaguchi,S., Hirano,K., Ichisaka,T., Kuroda,T. and Tada,T.
    • Journal Title

      Developmental Biology

      Volume: 392 Issue: 2 Pages: 182-192

    • DOI

      10.1016/j.ydbio.2014.06.002

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Single-cell cloning and expansion of human induced pluripotent stem cells by a microfluidic culture device2014

    • Author(s)
      Taku Matsumura, Kazuya Tatsumi, Yuichiro Noda, Naoyuki Nakanishi, Atsuhito Okonogi, Kunio Hirano, Liu Li, Takashi Osumi, Takashi Tada, Hidetoshi Kotera
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 453 Issue: 1 Pages: 131-137

    • DOI

      10.1016/j.bbrc.2014.09.081

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ubcellular glucose exposure biases the spatial distribution of insulin granules in single pancreatic beta cells2014

    • Author(s)
      Kyohei Terao, Murat Gel, Atsuhito Okonogi, Ariko Fuke, Teru Okitsu, Takashi Tada, Takaaki Suzuki, Shinya Nagamatsu, Masao Washizu & Hidetoshi Kotera
    • Journal Title

      Scientific Reports

      Volume: 4 Issue: 1 Pages: 1-6

    • DOI

      10.1038/srep04123

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Different Roles for Tet1 and Tet2 Proteins in Reprogranming-Mediated Erasure of Imprints Induced by EGC Fusion2013

    • Author(s)
      Piccolo, F. M., et al.
    • Journal Title

      Molecular Cell

      Volume: 49 Issue: 6 Pages: 1023-1033

    • DOI

      10.1016/j.molcel.2013.01.032

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Self-renewal and pluripotency acquired through somatic reprograouning to human cancer stem cells2012

    • Author(s)
      Nagata, S., et al.
    • Journal Title

      PLoS One

      Volume: 7 Issue: 11 Pages: e48699-e48699

    • DOI

      10.1371/journal.pone.0048699

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] REST and its downstream molecule Mek5 regulate survival of primordial germ cells2012

    • Author(s)
      Okamura, D., et al.
    • Journal Title

      Developmental Biology

      Volume: 372 Issue: 2 Pages: 190-202

    • DOI

      10.1016/j.ydbio.2012.09.013

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Hybridization of testis-derived stem cells with somatic cells and embryonic stem cells in Mice2012

    • Author(s)
      Takehashi, M., Tada, M., Kanatsu-Shinohara, M., Morimoto, H., Kazuki, Y., Oshimura, M., Tada, T. and Shinohara, T
    • Journal Title

      Biol. Reprod

      Volume: 86(6) Issue: 6 Pages: 178-178

    • DOI

      10.1095/biolreprod.112.098988

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genome Editing in Pluripotent Stem Cells2012

    • Author(s)
      Cheng, L.T., et al
    • Journal Title

      Genes to Cells

      Volume: (印刷中) Issue: 6 Pages: 431-438

    • DOI

      10.1111/j.1365-2443.2012.01599.x

    • Related Report
      2012 Annual Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cure of ADPKD by Selection for Spontaneous Genetic Repair Events in Pkd1-Mutated iPS Cells2012

    • Author(s)
      Cheng Li-Tao
    • Journal Title

      PLoS ONE

      Volume: 7 Issue: 2 Pages: e32018-e32018

    • DOI

      10.1371/journal.pone.0032018

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Hybridization of testis-derived stem cells with somatic and embryonic stem cells2012

    • Author(s)
      Takehashi, M., et al
    • Journal Title

      Biology of Reproduction

      Volume: (印刷中)

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cure of ADPKD by Selection for Spontaneous Genetic Repair Events in Pkd1-Mutated iPS Cells2012

    • Author(s)
      Cheng, L.T., et al
    • Journal Title

      PLoS One

      Volume: 7

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Human and House Induced Pluripotent Stem Cells Are Differentially Reprogrammed in response to Kinase Inhibitors2012

    • Author(s)
      Hirano, K., et al
    • Journal Title

      Stem Cells and Development

      Volume: (印刷中)

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Human and Mouse Induced Pluripotent Stem Cells Are Differentially Reprogrammed in response to Kinase Inhibitors2011

    • Author(s)
      平野邦生
    • Journal Title

      Stem Cells and Development

      Volume: (印刷中) Issue: 8 Pages: 1287-1298

    • DOI

      10.1089/scd.2011.0283

    • NAID

      120004247259

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sox2 expression effects on direct reprogramming efficiency as determined by alternative somatic cell fate2011

    • Author(s)
      Yamaguchi, S., et al
    • Journal Title

      Stem Cell Research

      Volume: 6 Pages: 177-186

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] Conversion of intermediately reprogrammed stem cells to human iPSC2014

    • Author(s)
      Takashi Tada
    • Organizer
      SPP1356-International Symposium Reprogrammed Stem Cells
    • Place of Presentation
      Berlin, Germany
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] マウスiPS細胞を用いた常染色体優性多発性嚢胞腎の治療モデル2012

    • Author(s)
      程 李涛 他
    • Organizer
      第55回日本腎臓学会学術総会
    • Place of Presentation
      パシフィコ横浜会議センター( 神奈川県 )
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] マウスiPS細胞を用いた常染色体優性多発性嚢胞腎の治療モデル2012

    • Author(s)
      多田 高
    • Organizer
      第12回PKD研究会
    • Place of Presentation
      品川プリンスホテル ( 東京都 )
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Self-renewal and Pluripotency Acquired through Somatic Reprogramming to Human Cancer Stem Cells2012

    • Author(s)
      長田 翔伍 他
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場( 福岡県 )
    • Related Report
      2012 Annual Research Report
  • [Presentation] マウスiPS細胞におけるPkd1遺伝子の遺伝的異常の自発的正常化2011

    • Author(s)
      Cheng, L.T., et al
    • Organizer
      第44回日本発生生物学会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] リン酸化阻害剤によるヒトとマウスiPS細胞での異なるリプログラミング運命2011

    • Author(s)
      平野邦生, 他
    • Organizer
      日本遺伝学会第83回大会
    • Place of Presentation
      京都大学農学部農学部総合館(京都府)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Human and Mouse Induced Pluripotent Stem Cells Are Differentially Reprogrammed in response to Kinase Inhibitors2011

    • Author(s)
      Hirano, K., et al
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] The Function and Expression Regulation of Nanog in Mouse Epiblast2011

    • Author(s)
      Sun, L.T., et al
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Related Report
      2011 Annual Research Report
  • [Book] Principle of Cloning, 2nd edition2013

    • Author(s)
      Tada, T. and Surani, M.A.
    • Total Pages
      562
    • Publisher
      Academic Press
    • Related Report
      2013 Annual Research Report
  • [Book] DOJIN BIOSCIENCE シリーズ『エピジェネティクス』その分子機構から高次生命機能まで2013

    • Author(s)
      多田 高
    • Total Pages
      282
    • Publisher
      化学同人
    • Related Report
      2013 Annual Research Report
  • [Book] DOJIN BIOSCIENCE シリーズ『染色体と細胞核のダイナミクス』DNAを操る細胞の仕組み2013

    • Author(s)
      多田 高
    • Total Pages
      224
    • Publisher
      化学同人
    • Related Report
      2013 Annual Research Report
  • [Book] Epigenetic reprogramming of somatic nuclei via cell fusion.In “Principle of Cloning, 2nd edition” edited by Jose Cibelli et al.2012

    • Author(s)
      Tada, T. et al.
    • Publisher
      Academic Press (USA)
    • Related Report
      2012 Annual Research Report
  • [Book] Targeted chromosome elimination from ES-somatic hybrid cells. In “Principle of Cloning, 2nd edition” edited by Jose Cibelli et al.2012

    • Author(s)
      Hirano, K., et al.
    • Publisher
      Academic Press (USA)
    • Related Report
      2012 Annual Research Report
  • [Book] 増刊 幹細胞「進展する幹細胞のサイエンスから再生医療へ」: ヒトとマウスiPS細胞の共通性と相違点2012

    • Author(s)
      多田 高
    • Total Pages
      6
    • Publisher
      羊土社
    • Related Report
      2012 Annual Research Report
  • [Book] 増刊幹細胞「進展する幹細胞のサイエンスから再生医療へ」:ヒトとマウスiPS細胞の共通性と相違点2012

    • Author(s)
      多田高
    • Publisher
      羊土社(印刷中)
    • Related Report
      2011 Annual Research Report
  • [Book] Cell Fusion-mediated Nuclear Reprogramming. In "Nuclear Reprogramming and Stem Cells"2011

    • Author(s)
      Hirano, K., et al
    • Total Pages
      11
    • Publisher
      Humana Press (USA)
    • Related Report
      2011 Annual Research Report
  • [Book] Nuclear Reprogramming and Stem Cells2011

    • Author(s)
      Ainscough, J., et al
    • Total Pages
      332
    • Publisher
      Humana Press (USA)
    • Related Report
      2011 Annual Research Report
  • [Book] 別冊;次世代iPS医療、医学のあゆみ、239巻14号:ヒトiPS細胞の迅速な初期神経細胞分化2011

    • Author(s)
      多田高
    • Total Pages
      6
    • Publisher
      医歯薬出版
    • Related Report
      2011 Annual Research Report
  • [Remarks] 京都大学 再生医科学研究所 幹細胞加工研究分野

    • URL

      http://www.frontier.kyoto-u.ac.jp/es03/index.html

    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://www.frontier.kyoto-u.ac.jp/es03/index.html

    • Related Report
      2011 Annual Research Report
  • [Patent(Industrial Property Rights)] 新規初期化細胞 (Novel Reprogrammed Cell)2013

    • Inventor(s)
      多田 高、長田翔伍、平野邦生
    • Industrial Property Rights Holder
      京都大学
    • Industrial Property Rights Type
      特許
    • Filing Date
      2013-01-04
    • Related Report
      2012 Annual Research Report
    • Overseas

URL: 

Published: 2011-04-06   Modified: 2019-07-29  

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