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Comprehensive genetic analysis identifying novel genetic abnormalities responsible for myeloproliferative neoplasm

Research Project

Project/Area Number 23390255
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Hematology
Research InstitutionKurume University

Principal Investigator

OKAMURA TAKASHI  久留米大学, 医学部, 教授 (30136436)

Co-Investigator(Kenkyū-buntansha) OKU Eijiro  久留米大学, 医学部, 助教 (10569429)
MIZUNO Shinichi  九州大学, 先端医療イノベーションセンター, 准教授 (40569430)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥18,850,000 (Direct Cost: ¥14,500,000、Indirect Cost: ¥4,350,000)
Fiscal Year 2013: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2012: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Fiscal Year 2011: ¥7,540,000 (Direct Cost: ¥5,800,000、Indirect Cost: ¥1,740,000)
Keywords血液腫瘍学 / 遺伝子変異 / 造血器悪性腫瘍 / 染色体転座 / 癌 / ゲノム / 白血病
Research Abstract

In this study, we performed a comprehensive genetic analysis by using a newly developed system for fusion-gene detection and whole exome analysis, in order to identify novel genetic abnormalities responsible for myeloproliferative neoplasm (MPN) and to develop a new therapeutic option. We could detect several candidate regions with altered genomic structures which would contribute to produce novel fusion-genes. In addition, many novel missense mutations were found in MPN cases by whole exome analysis, however, they are not shared among cases. We are applying CRISPR method to patients' derived iPSs in order to clarify genetic functions of those mutations. Furthermore, we found out that peptides derived from those mutations could be presented to patients' HLA molecules and be recognized by T cells. We are preparing a protocol to provide patients a novel therapeutic option as genetic analysis-based personalized immunotherapy.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (15 results)

All 2014 2013 2012 2011

All Journal Article (11 results) (of which Peer Reviewed: 9 results) Patent(Industrial Property Rights) (4 results) (of which Overseas: 2 results)

  • [Journal Article] Donor-derived 47, XXY in an unrelated cord blood transplant recipient.2014

    • Author(s)
      Kawaguchi K, Nakamura T, Nohara M, Koteda S, Nomura K, Morishige S, Oku E, Imamura R, Mouri F, Seki R, Osaki K, Hashiguchi M, Yoshimoto K, Nagafuji K, Okamura T.
    • Journal Title

      Springerplus.

      Volume: 6 Issue: 1 Pages: 72-72

    • DOI

      10.1186/2193-1801-3-72

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Monitoring of minimal residual disease (MRD) is useful to predict prognosis of adult patients with Ph-negative ALL : results of a prospective study (ALL MRD2002 Study)2013

    • Author(s)
      Nagafuji K, Miyamoto T, Eto T, Kamimura T, Taniguchi S, Okamura T, Ohtsuka E, Yoshida T, Higuchi M, Yoshimoto G, Fujisaki T, Abe Y, Takamatsu Y, Yokota S, Akashi K, Harada M. (16名, 6番目)
    • Journal Title

      J Hematol Oncol

      Volume: 6 Issue: 1 Pages: 14-14

    • DOI

      10.1186/1756-8722-6-14

    • Related Report
      2013 Annual Research Report 2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Successful treatment of small cell variant anaplastic large cell lymphoma with allogeneic peripheral blood stem cell transplantation, and review of the literature2013

    • Author(s)
      Imamura R, Mouri F, Oku E, Okamura T
    • Journal Title

      Int J Hematol

      Volume: 97 Issue: 1 Pages: 139-143

    • DOI

      10.1007/s12185-012-1242-3

    • NAID

      10031144646

    • Related Report
      2013 Annual Research Report 2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] [Fatal zygomycosis caused by Mucor indicus after haplo-identical stem cell transplantation]2013

    • Author(s)
      Koteda S, Nomura K, Hashiguchi M, Kawaguchi K, Oku E, Osaki K, Nakamura T, Mouri F, Imamura R, Seki R, Nagafuji K, Makimura K, Okamura T.
    • Journal Title

      Rinsho Ketsueki.

      Volume: 54(3) Pages: 311-315

    • NAID

      10031165622

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A case of 8p11 myeloproliferative syndrome with BCR-FGFR1 gene fusion presenting with trilineage acute leukemia/lymphoma, successfully treated by cord blood transplantation2013

    • Author(s)
      Morishige S, Oku E, Mizuno S, Okamura T
    • Journal Title

      Acta Haematol

      Volume: 129 Issue: 2 Pages: 83-89

    • DOI

      10.1159/000341289

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Platelets with a W127X mutation in GPIX express sufficient residual amounts of GPIbα to support adhesion to von Willebrand factor and collagen2012

    • Author(s)
      Yuka Takata et al
    • Journal Title

      Int J Hematol

      Volume: 96(6) Issue: 6 Pages: 733-742

    • DOI

      10.1007/s12185-012-1216-5

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] GPIb α regulates platelet size by controlling the subcellular localization of filamin2012

    • Author(s)
      Kanaji T, Ware J, Okamura T, Newman PJ. (4名, 3番目)
    • Journal Title

      Blood

      Volume: 119 Issue: 12 Pages: 2906-2913

    • DOI

      10.1182/blood-2011-08-376566

    • Related Report
      2013 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Unrelated cord blood transplantation for patients with adult T-cell leukemia/lymphoma: experience at a single institute2012

    • Author(s)
      Nakamura T, Oku E, Mizuno S, Okamura T
    • Journal Title

      Int J Hematol

      Volume: 96 Issue: 5 Pages: 657-663

    • DOI

      10.1007/s12185-012-1177-8

    • NAID

      10031126764

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 標本に学ぶ血液疾患症例「骨髄線維症」2012

    • Author(s)
      岡村孝
    • Journal Title

      血液フロンティア

      Volume: 創刊20周年記念刊 Pages: 171-177

    • Related Report
      2011 Annual Research Report
  • [Journal Article] Prospective evaluation of hemostatic abnormalities in overt DIC due to various underlining diseases2011

    • Author(s)
      Kawasugi K, Wada H, Hatada T, Okamoto K, Uchiyama T, Kushimoto S, Seki Y, Okamura T, Nobori T
    • Journal Title

      Thromb Res

      Volume: 128 Issue: 2 Pages: 186-190

    • DOI

      10.1016/j.thromres.2011.02.015

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 骨髄線維症の病態研究と治療の進歩2011

    • Author(s)
      岡村孝
    • Journal Title

      血液内科

      Volume: 63 Pages: 604-613

    • NAID

      40019086906

    • Related Report
      2011 Annual Research Report
  • [Patent(Industrial Property Rights)] METHOD FOR EXCLUSIVE SELECTION OF CIRCULARIZED DNA FROM MONOMOLECULAR DNA WHEN CIRCULARIZING DNA MOLECULES2012

    • Inventor(s)
      MIZUNO Shinichi, OZAWA Hidetoshi, NAGAFUJI Koji, OKAMURA Takashi
    • Industrial Property Rights Holder
      KURUME UNIVERSITY
    • Industrial Property Rights Type
      特許
    • Filing Date
      2012-08-24
    • Related Report
      2013 Final Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] METHOD FOR PRODUCING CIRCULAR DNA FORMED FROM SINGLE-MOLECULE DNA2011

    • Inventor(s)
      MIZUNO Shinichi, NAGAFUJI Koji, OKAMURA Takashi
    • Industrial Property Rights Holder
      KURUME UNIVERSITY
    • Industrial Property Rights Type
      特許
    • Filing Date
      2011-08-22
    • Related Report
      2013 Final Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] DNA分子の環状化において単分子による環状化DNAのみを選別する方法2011

    • Inventor(s)
      水野晋一, 小澤秀俊, 長藤宏司, 岡村孝
    • Industrial Property Rights Holder
      久留米大学
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2011-189280
    • Filing Date
      2011-08-31
    • Related Report
      2013 Final Research Report
  • [Patent(Industrial Property Rights)] DNA分子の環状化において単分子による環状化DNAのみを選別する方法2011

    • Inventor(s)
      水野晋一、小澤秀俊、長藤宏司、岡村孝
    • Industrial Property Rights Holder
      久留米大学
    • Industrial Property Number
      2011-189280
    • Filing Date
      2011-08-31
    • Related Report
      2011 Annual Research Report

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Published: 2011-04-06   Modified: 2019-07-29  

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