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Detection of gastrointestinal cancer biomarkers by next-generation mass spectrometry and comprehensive gene expression analysis

Research Project

Project/Area Number 23390320
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Digestive surgery
Research InstitutionKyoto University (2013)
University of Toyama (2011-2012)

Principal Investigator

SHIMADA Yutaka  京都大学, 薬学研究科(研究院), 准教授 (30216072)

Co-Investigator(Kenkyū-buntansha) TSUKADA Kazuhiro  富山大学, 大学院・医学薬学研究部, 教授 (90171967)
OKUMURA Tomoyuki  富山大学, 大学院・医学薬学研究部, 助教 (10533523)
ARIMA Miwako  埼玉県立がんセンター, 臨床腫瘍研究所, 副部長 (00312950)
ABE Tetsuya  愛知県がんセンター, 研究所, 医長 (90378092)
MONMA Kumiko  東京都立駒込病院, 内視鏡科部長 (70509471)
Co-Investigator(Renkei-kenkyūsha) TSUJIMOTO Gozo  京都大学, 薬学研究科(研究院), 教授 (80172013)
Project Period (FY) 2011-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥18,720,000 (Direct Cost: ¥14,400,000、Indirect Cost: ¥4,320,000)
Fiscal Year 2013: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2012: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2011: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Keywordsバイオマーカー / 食道癌 / miRNA / 早期発見 / 質量分析 / 次世代質量顕微鏡
Research Abstract

We here evaluated a next-generation mass spectrometer and found that it not suitable for a comprehensive protein analysis of blood. Therefore, we performed a microRNA analysis of blood. To exclude individual differences between patients, we focused on esophageal mucosal cancer patients who were scheduled to undergo endoscopic mucosal resection (EMR) in the present study. Forty-three patients were recruited from 3 institutes. We analyzed the expression of miRNAs in pre-treatment as well as post-treatment blood samples that were collected from 31 patients. Significant differences were observed in the expression of 11 miRNAs between pre-treatment and post-treatment samples. We will analyze these miRNAs in 30 patients with advanced esophageal cancer in a future study and evaluate their efficacy as biomarkers of esophageal cancer.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (32 results)

All 2014 2013 2012 2011

All Journal Article (20 results) (of which Peer Reviewed: 8 results) Presentation (12 results)

  • [Journal Article] Expression analysis of fibroblast growth factor receptor-like 1 (FGFRL1) in esophageal squamous cell carcinoma2014

    • Author(s)
      Shimada Y, Okumura T, Nagata T, Hashimoto I, Sawada S, Y oshida T, Fukuoka J, Shimizu K, Tsukada K
    • Journal Title

      Esophagus

      Volume: 11 Pages: 48-53

    • NAID

      40020229726

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Journal Article] Relapse-associated microRNA in gastric cancer patients after S-1 adjuvant chemotherapy2014

    • Author(s)
      Omura T, Shimada Y, Nagata T, Okumura T, Fukuoka J, Y amagishi F, Tajika S, Nakajima S, Kawabe A, Tsukada K
    • Journal Title

      Oncol Rep

      Volume: 31 Pages: 613-618

    • Related Report
      2013 Final Research Report
  • [Journal Article] MicroRNA-203 inhibits the progression of esophageal squamous cell carcinoma with restored epithelial tissue architecture in vivo2014

    • Author(s)
      Okumura T, Shimada Y, Moriyama M, Takei Y, Omura T, Sekine S, Nagata T, Shimizu K2, Tsukada K
    • Journal Title

      Int J Oncol

      Volume: 44 Pages: 1923-32

    • Related Report
      2013 Final Research Report
  • [Journal Article] Relapse-associated microRNA in gastric cancer patients after S-1 adjuvant chemotherapy2014

    • Author(s)
      Omura T
    • Journal Title

      Oncology Reports

      Volume: 31 Issue: 2 Pages: 613-618

    • DOI

      10.3892/or.2013.2900

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Possible involvement of glucose transporter 3 and 4 in esophageal leiomyoma with unusual high uptake of fluorine-18-fluorodeoxyglucose2013

    • Author(s)
      Shimada Y, Okumura T, Hori R, Moriyama M, Sekine S, Nagata T, Nomoto K, Fukuoka J, Tazawa K, Tsukada K
    • Journal Title

      Three case reports- Esophagus

      Volume: 10 Pages: 34-41

    • Related Report
      2013 Final Research Report
  • [Journal Article] Clinicopathological significance of deoxycytidine kinase expression in esophageal squamous cell carcinoma2013

    • Author(s)
      Shimada Y, Okumura T, Sekine S, Moriyama M, Hojo S, Matsui K, Sawada S, Nagata T, Fukuoka J, Tsukada K
    • Journal Title

      Molecular and Clinical Oncology

      Volume: 1 Pages: 716-720

    • Related Report
      2013 Final Research Report
  • [Journal Article] Barrett' s adenocarcinoma arising 30 years after a Nissen fundoplication2013

    • Author(s)
      Shimada Y, Okumura T, Hashimoto I, Matsui K, Shibuya K, Hojo S, Nagata T, Hayashi S, Tsukada K
    • Journal Title

      Esophagus

      Volume: 10 Pages: 179-183

    • Related Report
      2013 Final Research Report
  • [Journal Article] Possible involvement of glucose transporter 3 and 4 in esophageal leiomyoma with unusual high uptake of fluorine-18-fluorodeoxyglucose. -Three case reports-2013

    • Author(s)
      Shimada Y
    • Journal Title

      Esophagus

      Volume: 10 Issue: 1 Pages: 34-41

    • DOI

      10.1007/s10388-012-0341-9

    • NAID

      40019641087

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Clinicopathological significance of deoxycytidine kinase expression in esophageal squamous cell carcinoma2013

    • Author(s)
      Shimada Y
    • Journal Title

      Molecular and Clinical Oncology

      Volume: 1

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Barrett’s adenocarcinoma arising 30 years after a Nissen fundoplication2013

    • Author(s)
      Shimada Y
    • Journal Title

      Esophagus

      Volume: 10 Issue: 3 Pages: 179-183

    • DOI

      10.1007/s10388-013-0370-z

    • NAID

      40019794115

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Critical role for the receptor tyrosine kinase EPHB4 in esophageal cancers2012

    • Author(s)
      Hasina R, Mollberg N, Kawada I, Mutreja K, Kanade G, Y ala S, Surati M, Liu R, Li X, Zhou Y, Ferguson BD, Nallasura V, Cohen KS, Hyjek E, Mueller J, Kanteti R, El Hashani E, Kane D, Shimada Y, Lingen MW, Husain AN, Posner MC, Waxman I, Villaflor VM, Ferguson MK, V articovski L, V okes EE, Gill P, Salgia R
    • Journal Title

      Cancer Res

      Volume: 73 Pages: 184-194

    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Journal Article] Expression Analysis of iPS Cell Inductive Genes in Esophageal Squamous Cell Carcinoma by Tissue Microarray2012

    • Author(s)
      Shimada Y, Okumura T, Sekine S, Moriyama M, Sawada S, Matsui K, Y oshioka I, Hojo S, Y oshida T, Nagata T, Fukuoka J, Tsukada K
    • Journal Title

      Anticancer Res

      Volume: 32 Pages: 5507-5514

    • Related Report
      2013 Final Research Report
  • [Journal Article] Expression Analysis of iPS Cell – Inductive Genes in Esophageal Squamous Cell Carcinoma by Tissue Microarray2012

    • Author(s)
      Shimada Y
    • Journal Title

      Anticancer Res

      Volume: 32 Pages: 5507-5514

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MicroRNA-210 Regulates Cancer Cell Proliferation through Targeting Fibroblast Growth Factor Receptor-Like 1 (FGFRL1)2011

    • Author(s)
      Tsuchiya S, Fujiwara T, Sato F, Shimada Y, Tanaka E, Sakai Y, Shimizu K, Tsujimoto G
    • Journal Title

      J Biol Chem

      Volume: 286 Pages: 420-428

    • Related Report
      2013 Final Research Report
  • [Journal Article] Polo-like Kinase 1 regulates cell proliferation and is targeted by miR-593* in esophageal cancer2011

    • Author(s)
      Ito T, Sato F, Kan T, Cheng Y, David S, Agarwal R, Paun BC, Jin Z, Olaru A V, Hamilton JP, Selaru FM, Y ang J, Matsumura N, Shimizu K, Abraham JM, Shimada Y, Mori Y, Meltzer SJ
    • Journal Title

      Int J Cancer

      Volume: 129 Pages: 2134-2146

    • Related Report
      2013 Final Research Report
  • [Journal Article] MicroRNA-141 Confers Resistance to Cisplatin-induced Apoptosis by Targeting Y AP1 in Human Esophageal Squamous Cell Carcinoma2011

    • Author(s)
      Imanaka Y, Tsuchiya S, Sato F, Shimada Y, Shimizu K, Tsujimoto G
    • Journal Title

      J. Hum. Genet

      Volume: 56 Pages: 270-276

    • NAID

      10030658712

    • Related Report
      2013 Final Research Report
  • [Journal Article] MicroRNA profiling of gastric cancer patients from formalin-fixed parafifin-embedded samples2011

    • Author(s)
      Osawa S, Shimada Y, Sekine S, Okumura T, Nagata T, Fukuoka J, Tsukada K
    • Journal Title

      Oncology letters

      Volume: 2 Pages: 613-619

    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Journal Article] MicroRNA-210 Regulates Cancer Cell Proliferation through Targeting Fibroblast Growth Factor Receptor-Like 1 (FGFRL1)2011

    • Author(s)
      Tsuchiya S
    • Journal Title

      Journal of Biological Chemistry

      Volume: 286 Pages: 420-428

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Polo-like Kinase 1 regulates cell proliferation and is targeted by miR-593^* in esophageal cancer2011

    • Author(s)
      Ito T
    • Journal Title

      Int J Cancer

      Volume: 129 Pages: 2134-2146

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MicroRNA-141 Confers Resistance to Cisplatin-induced Apoptosis by Targeting YAP1 in Human Esophageal Squamous Cell Carcinoma2011

    • Author(s)
      Imanaka Y
    • Journal Title

      J.Hum.Genet

      Volume: 56 Pages: 270-276

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] Successful enucleation of esophageal leiomyoma in the prone position2013

    • Author(s)
      Shimada Y , Okumura T, Matsui K, Yoshioka I, Sawada S, Yoshida T , Nagata T , Tsukada K
    • Organizer
      International surgical week ISW 2013
    • Place of Presentation
      Helsinki
    • Year and Date
      2013-08-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Expression analysis of fibroblast growth factor receptor like 1 (FGFRL1) in esophageal cancer2013

    • Author(s)
      Shimada Y , Okumura T Nagata T , Hashimoto I, Sawada S, Y oshida T , Shimizu K, Tsukada K
    • Organizer
      48th Congress of European Society for Surgical Research
    • Place of Presentation
      Istanbul
    • Year and Date
      2013-05-30
    • Related Report
      2013 Final Research Report
  • [Presentation] Newly established Barrett' s adenocarcinoma cell line (TYAE-1)2013

    • Author(s)
      Shimada Y, Moriyama M, Okumura T, Kekine S, Sawada S, Matsui K, Hojo S, Shibuya K, Y oshioka I, Y oshida T , Nagata T , Tsukada T
    • Organizer
      Annual meeting of American Association for Cancer Research
    • Place of Presentation
      Washington DC
    • Year and Date
      2013-04-09
    • Related Report
      2013 Final Research Report
  • [Presentation] Successful enucleation of esophageal leiomyoma in the prone position2013

    • Author(s)
      Shimada Y
    • Organizer
      International Surgical Week
    • Place of Presentation
      Helsinki (Finland)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Newly established Barrett’s adenocarcinoma cell line (TYAE-1)2013

    • Author(s)
      Shimada Y
    • Organizer
      Annual meeting of American Association for Cancer Research
    • Place of Presentation
      Washington DC (USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Expression analysis of fibroblast growth factor receptor-like 1 (FGFRL1) in esophageal cancer2013

    • Author(s)
      Shimada Y
    • Organizer
      48th Congress of European Society for Surgical Research
    • Place of Presentation
      Istanbul (Turkey)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Possible involvement of glucose transporter 3 and 4 in esophageal leiomyoma with unusual high uptake of fluorine-18-fluorodeoxyglucose2012

    • Author(s)
      Shimada Y , Okumura T, Hori R, Moriyama M, Sekine S, Nagata T , Nomoto K, Fukuoka J, Tazawa K, Tsukada K
    • Organizer
      The 2012 ISDE congress
    • Place of Presentation
      Venice (Italy)
    • Year and Date
      2012-10-16
    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Presentation] Identification of microRNAs which regulate stem cell property in esophageal squamous cell carcinoma2012

    • Author(s)
      Okumura T , Shimada Y, Sekine S, Moriyama M, Omura T , Kamiyama K, Hori R, Watanabe T , Hojo S, Matsui K, Y oshioka I, Sawada S, Y oshida T , Nagata T , Tsukada K
    • Organizer
      The 2012 ISDE congress
    • Place of Presentation
      Venice (Italy)
    • Year and Date
      2012-10-16
    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Presentation] Clinicopathological significance of deoxycytidine kinase expression in esophageal squamous cell carcinoma2012

    • Author(s)
      Shimada Y , Okumura T, Sekine S, Moriyama M, Hojo S, Sawada S, Y oshioka I, Nagata T , Fukumoto J, Tsukada K
    • Organizer
      47th ESSR Annual Congress
    • Place of Presentation
      Lille (France)
    • Year and Date
      2012-06-08
    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Presentation] Identification of microRNAs which are differentially expressed in p75NTR-positive esophageal squamous cell carcinoma2011

    • Author(s)
      Okumura T , Shimada Y, Sekine S, Moriyama M, Omura T , Kamiyama K, Hori R, Watanabe T , Hojo S, Matsui K, Y oshioka I, Sawada S, Y oshida T , Nagata T , Tsukada K
    • Organizer
      International surgical week 2011
    • Place of Presentation
      Yokohama
    • Year and Date
      2011-08-30
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] Micro-RNA profiling of esophageal squamous cell cancer and gastric cancer from formalin-fixed paraffin -embedded (FFPE) specimens2011

    • Author(s)
      Shimada Y , Okumura T, Osawa S, Sawada S, Nagata T , Fukuoka J, Tsukada K
    • Organizer
      13th world congress on gastrointestinal cancer
    • Place of Presentation
      Barcelona
    • Year and Date
      2011-06-23
    • Related Report
      2013 Final Research Report
  • [Presentation] Micro-RNA profiling of esophageal squamous cell cancer and gastric cancer from formalin-fixed paraffin-embedded (FFPE) specimens2011

    • Author(s)
      Shimada Y
    • Organizer
      13th world congress on gastrointestinal cancer
    • Place of Presentation
      Barcelona
    • Year and Date
      2011-06-23
    • Related Report
      2011 Annual Research Report

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Published: 2011-04-06   Modified: 2019-07-29  

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