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Comparison of the virologic and host characteristics between HIV-1-infected Kenyan children with rapid and slow disease progression

Research Project

Project/Area Number 23406013
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Virology
Research InstitutionKanazawa University

Principal Investigator

ICHIMURA Hiroshi  金沢大学, 医学系, 教授 (10264756)

Co-Investigator(Kenkyū-buntansha) 石崎 有澄美  金沢大学, 医学系, 助教 (30456420)
畢 袖晴  金沢大学, 医学系, 助教 (50565413)
Co-Investigator(Renkei-kenkyūsha) BI Xiuqiong  金沢大学, 医学系, 助教 (50565413)
ISHIZAKI Azumi  金沢大学, 医学系, 助教 (30456420)
Project Period (FY) 2011-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥18,460,000 (Direct Cost: ¥14,200,000、Indirect Cost: ¥4,260,000)
Fiscal Year 2014: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2013: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2012: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2011: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
KeywordsHIV感染小児 / 病態進行関連因子 / 遅発症者 / 早期発症者 / HLA / ケニア / HIV-1感染小児 / 病態進行 / 宿主因子 / エピトープ / ウイルス因子 / 国際研究者交流 / ウイルス側因子 / 薬剤耐性ウイルス / HIV-1 / 小児エイズ
Outline of Final Research Achievements

In the present study, we aimed at elucidating the factors related to disease progression in HIV-1 infected children. For this purpose, we compared sequence variations in the HIV-1 gag and nef genes between the rapid and slow progressors, and further investigated the presence of reported protective or susceptible HLA types and the predicted MHC-1 binding capability of the Gag and Nef epitopes between the two groups. Our present findings showed that the slow and rapid progressors did not have distinct sequence variations in both Nef and Gag. Compared to the rapid progressors, the slow progressors had more protective HLA-A alleles and more HLA-B-related epitopes in both Nef and Gag. These results suggest that the HLA, a host factor, plays a more important role in disease progression than the viral factors, such as variations in HIV-1 Nef and Gag, among HIV-1-infected Kenyan children.

Report

(5 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (32 results)

All 2015 2014 2013 2012 2011 Other

All Journal Article (13 results) (of which Peer Reviewed: 12 results,  Open Access: 2 results,  Acknowledgement Compliant: 4 results) Presentation (16 results) (of which Invited: 4 results) Book (1 results) Remarks (2 results)

  • [Journal Article] Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: an Individual Patient and Sequence-level Meta-Analysis.2015

    • Author(s)
      Soo-Yon Rhee, Jose Luis Blanco, ---, Hrioshi Ichimura,---, et al.
    • Journal Title

      PLoS Medicine

      Volume: 12 Issue: 4 Pages: e1001810-e1001810

    • DOI

      10.1371/journal.pmed.1001810

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Genetic analyses of HIV-1 strains transmitted from mother to child in Northern Vietnam.2015

    • Author(s)
      Phan CTT, Pham HV, Bi X, Ishizaki A, Saina M, Phung CD, Khu DTK, Ichimura H.
    • Journal Title

      AIDS Res Hum Retroviruses

      Volume: Mar 31

    • NAID

      120005661928

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Characterization of HBV Among HBV/HIV-1 Co-Infected Injecting Drug Users from Mombasa, Kenya2015

    • Author(s)
      Kibaya RM, Lihana RW, Kiptoo M, Songok EM, Ng’ang’a Z, Osman S, Ishizaki A, Bi X, Okoth FA, Ichimura H and Lwembe RM
    • Journal Title

      Current HIV Res

      Volume: Jan 20

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Two-year outcome of first-line antiretroviral therapy among HIV-1 vertically infected children in Hanoi, Vietnam2014

    • Author(s)
      Pham HV, Ishizaki A, Nguyen LV, Phan CTT, Phung TTB, Takemoto K, Pham AN, Bi X, Khu DTK, and Ichimura H.
    • Journal Title

      Int J STD AIDS

      Volume: Oct 19

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Two-year outcome of first-line antiretroviral therapy among HIV-1 vertically infected children in Hanoi, Vietnam.2014

    • Author(s)
      Pham HV, Ishizaki A, Nguyen LV, Phan CTT, Phung TTB, Takemoto K, Pham AN, Bi X, Khu DTK, and Ichimura H.
    • Journal Title

      Int J STD AIDS

      Volume: 印刷中

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diversity of HIV-1 and Drug Resistance Mutations among Injecting Drug Users in Kenya2013

    • Author(s)
      Osman S, Lihana RW, Kibaya RM, Ishizaki A, Bi X, Okoth FA, Ichimura H, Lwembe RM
    • Journal Title

      AIDS Res Hum Retroviruses

      Volume: 29 Issue: 1 Pages: 187-190

    • DOI

      10.1089/aid.2012.0182

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Infection with High-risk HPV Types among Female Sex Workers in Northern Vietnam2013

    • Author(s)
      Hoang HT, Ishizaki A, Nguyen CH, Tran VT, Matsushita K, Saikawa K, Hosaka N, Pham HV, Bi X, Ta VT, Pham TV, and Ichimura H.
    • Journal Title

      J Med Virol

      Volume: 85 Issue: 2 Pages: 288-294

    • DOI

      10.1002/jmv.23456

    • NAID

      120005253233

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] E6 and E7 variants of human papillomavirus-16 and -52 in Japan, the Philippines, and Vietnam.2013

    • Author(s)
      Ishizaki A, Matsushita K, Hoang HT, Agdamag DM, Nguyen CH, Tran VT, Sasagawa T, Saikawa K, Lihana R, Pham HV, Bi X, Ta VT, Pham TV, and Ichimura H.
    • Journal Title

      J Med Virol

      Volume: 85 Issue: 6 Pages: 1069-1076

    • DOI

      10.1002/jmv.23566

    • NAID

      120005254073

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] No increase of drug-resistant HIV-1 prevalence among drug-naïve individuals in Northern Vietnam2012

    • Author(s)
      Tran VT, Ishizaki A, Nguyen CH, Hoan HT, Pham HV, Bi X, Pham TV, and Ichimura H.
    • Journal Title

      AIDS Research and Human Retroviruses

      Volume: 28(10) Pages: 1349-1351

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] No increase of drug-resistant HIV-1 prevalence among drug-naive individuals in Northern Vietnam2012

    • Author(s)
      Tran VT, Ichimura H, et al.
    • Journal Title

      AIDS Res Hum Retroviruses

      Volume: (in press)

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High prevalence of intermediate-risk human papillomavirus infection in uterine cervices of Kenyan women infected with human immunodeficiency virus2011

    • Author(s)
      Rahman M, Ichimura H, et al.
    • Journal Title

      J Med Virol

      Volume: 83(11) Issue: 11 Pages: 1988-1996

    • DOI

      10.1002/jmv.22203

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Efficient monitoring of HIV-1 vertically-infected children in Kenya on first-line antiretroviral therapy2011

    • Author(s)
      Lihana RW, Ichimura H, et al.
    • Journal Title

      J Clin Virol

      Volume: 52(2) Pages: 123-128

    • NAID

      120003308588

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 日和見腫瘍2011

    • Author(s)
      畢袖晴、石崎有澄美、市村宏
    • Journal Title

      臨床と微生物

      Volume: 38(3) Pages: 266-272

    • Related Report
      2011 Annual Research Report
  • [Presentation] Sequence variation in the HIV-1 Gag gene among rapid, slow and non progressor children2014

    • Author(s)
      Matilda Saina, Xiuqiong Bi, Raphael Lihana, Hiroshi Ichimura
    • Organizer
      第13回あわじしま感染症・免疫フォーラム
    • Place of Presentation
      奈良県新公会堂
    • Year and Date
      2014-09-23 – 2014-09-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] ベトナムのB型慢性肝炎 患者における薬剤耐性 ウイルス出現に関する検討2013

    • Author(s)
      石崎有澄美、Pham HV、畢 袖晴、市村 宏
    • Organizer
      第56回日本感染症学会地方会学術集会
    • Place of Presentation
      大阪国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] Change in the prevalence of HIV-1 and the rate of circulating drug-resisitant HIV-1 in Hai Phong, Northern Viet Nam.2013

    • Author(s)
      Pham VH, Nguyen HC, Hoang TTH, Ishizaki A, Phan TTC, Bi X, Pham VT, Ichimura H.
    • Organizer
      第61回日本ウイルス学会学術集会
    • Place of Presentation
      神戸国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] Sequence variation in the HIV-1 Gag gene among rapid, slow and non progressor children.2013

    • Author(s)
      Matilda Saina, Xiuqiong Bi, Raphael Lihana, Hiroshi Ichimura.
    • Organizer
      第61回日本ウイルス学会学術集会
    • Place of Presentation
      神戸国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] Mother-to-Child transmission of HIV-1 in Northern Vietnam2013

    • Author(s)
      Phan TTC, Pham HV, 石崎有澄美、畢 袖晴、市村 宏
    • Organizer
      第27回日本エイズ学会学術集会・総会
    • Place of Presentation
      熊本市民会館
    • Related Report
      2013 Annual Research Report
  • [Presentation] 国立大学での留学生へのワクチン接種2013

    • Author(s)
      市村 宏
    • Organizer
      第23回トラベラーズワクチンフォーラム
    • Place of Presentation
      国立国際医療研究センター、東京都
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 感染症に対するテーラーメード予防法の確立に向けて2013

    • Author(s)
      市村 宏
    • Organizer
      第83回日本衛生学会学術総会
    • Place of Presentation
      金沢大学・金沢美術工芸大学、石川県
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] The training and research collaboration between Kenya and Kanazawa university on viral infectious diseases and blood safety-the past, the present and the future2012

    • Author(s)
      Ichimura H.
    • Organizer
      THE 2^<nd> KEMRI ANNUAL SCIENTIFIC AND HEALTH (KASH) CONFERENCE
    • Place of Presentation
      ケニア中央医学研究所(ナイロビ、ケニア)(招待講演)
    • Year and Date
      2012-02-08
    • Related Report
      2011 Annual Research Report
  • [Presentation] ベトナムにおける薬剤耐性HIV-1の推移2012

    • Author(s)
      市村 宏
    • Organizer
      平成24年度北陸腸内細菌研究会
    • Place of Presentation
      ホテル日航金沢、石川県
    • Related Report
      2012 Annual Research Report
  • [Presentation] 世界のHIV感染症ーHIVの起源から治療の現状までー2012

    • Author(s)
      市村 宏
    • Organizer
      第55回日本感染症学会中日本地方会学術集会、第82回日本感染症学会西日本地方会学術集会、第60回日本んか学寮法学会西日本支部総会
    • Place of Presentation
      アクロス福岡、福岡県
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Sequence variations in the HIV-1 Nef gene in rapid, slow and non- progressor children2012

    • Author(s)
      畢 袖晴、他
    • Organizer
      第60回日本ウイルス学会学術集会
    • Place of Presentation
      グランキューブ大阪、大阪府
    • Related Report
      2012 Annual Research Report
  • [Presentation] Outcome of first line antiretroviral therapy among HIV-1 vertically-infected children in Hanoi, Vietnam2012

    • Author(s)
      Pham HV, Ichimura H、 他
    • Organizer
      第26回日本エイズ学会学術集会
    • Place of Presentation
      慶応義塾大学日吉キャンパス、神奈川県
    • Related Report
      2012 Annual Research Report
  • [Presentation] Outcome of first- and second-line antiretroviral therapy among HIV-1 vertically-infected Kenyan children2011

    • Author(s)
      Lihana R, Ichimura H., et al
    • Organizer
      第25回日本エイズ学会学術集会
    • Place of Presentation
      ハイアットリージェンシー東京(東京)
    • Year and Date
      2011-12-02
    • Related Report
      2011 Annual Research Report
  • [Presentation] Efficient monitoring of HIV-1 vertically-infected children in Kenya on first-line antiretroviral therapy2011

    • Author(s)
      Ichimura H., et al
    • Organizer
      The 6th IAS Conference on HIV Pathogenesis, Treatment and Prevention
    • Place of Presentation
      国際会議場(ローマ、イタリア)
    • Year and Date
      2011-07-20
    • Related Report
      2011 Annual Research Report
  • [Presentation] ヒト免疫不全ウイルス(HIV-1)感染者に対するプロバイオティクスの投与効果の解明

    • Author(s)
      市村 宏、石崎有澄美、畢 袖晴、Khu Thi Khanh Dung、ヤクルト中央研究所
    • Organizer
      平成25年度北陸腸内細菌研究会
    • Place of Presentation
      福井県国際交流会館
    • Related Report
      2013 Annual Research Report
  • [Presentation] アジアのHPV感染症

    • Author(s)
      市村 宏
    • Organizer
      日本臨床細胞学会第39回和歌山県支部学術集会
    • Place of Presentation
      和歌山農協会館
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Book] HIV infection in Sub-Saharan Africa. in "Environmental Health and Education for Sustainable Development"2012

    • Author(s)
      Raphael W. Lihana and Hiroshi Ichimura
    • Publisher
      Kanazawa e-Publishing Co. Ltd.
    • Related Report
      2012 Annual Research Report
  • [Remarks] 金沢大学医薬保健研究域医学系環境医科学専攻ウイルス感染症制御学

    • URL

      http://virus.w3.kanazawa-u.ac.jp/

    • Related Report
      2013 Annual Research Report
  • [Remarks] 金沢大学医薬保健研究域医学系環境医科学専攻ウイルス感染症制御学

    • URL

      http://virus.w3.kanazawa-u.ac.jp/

    • Related Report
      2012 Annual Research Report

URL: 

Published: 2011-04-06   Modified: 2019-07-29  

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