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Systematic identification and classification of polyubiquitinated proteins with specific chain linkage patterns.

Research Project

Project/Area Number 23510233
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Genome biology
Research InstitutionNagasaki International University (2014)
The University of Tokyo (2011-2013)

Principal Investigator

OTA kazuhisa  長崎国際大学, 薬学部, 准教授 (00322727)

Co-Investigator(Renkei-kenkyūsha) KITO Keiji  明治大学, 農学部生命科学, 講師 (40345632)
Project Period (FY) 2011-04-28 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2013: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2012: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsユビキチン / プロテオミクス / 出芽酵母 / 質量分析 / 脱ユビキチン化酵素 / 質量分析計
Outline of Final Research Achievements

Ubiquitin chains with distinct linkage pattern are said to give specific biological functions to their substrate proteins. To understand these relationships between “linkages and functions”, we tried to identify ubiquitinated proteins with specific chain linkage patterns by modifying our original enrichment method for polyubiquitinated substrates. As result, we succeeded in identifying the linkage specific substrates for lys48 and lys63, which are main linkage points and already extensively characterized, but not for minor linkage points, which are major targets of this study.

Report

(5 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (3 results)

All 2014 2012 2011

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (2 results)

  • [Journal Article] Detecting protein-DNA interactions using a modified yeast one-hybrid system2014

    • Author(s)
      Kazuhisa Ota, Shu-Ying Feng, Takashi Ito
    • Journal Title

      Methods Mol Biol

      Volume: 1164 Pages: 39-50

    • DOI

      10.1007/978-1-4939-0805-9_5

    • ISBN
      9781493908042, 9781493908059
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Presentation] Ubp6によるRpn1のユビキチン化状態の制御2012

    • Author(s)
      太田一寿
    • Organizer
      第35回 日本分子生物学会年会
    • Place of Presentation
      マリンメッセ福岡 福岡市
    • Related Report
      2012 Research-status Report
  • [Presentation] F-box protein機能の統一的理解を目指して2011

    • Author(s)
      太田一寿
    • Organizer
      日本分子生物学会第34回年会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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