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Phenotyping of cell through the glycolipid metabolic analyssis

Research Project

Project/Area Number 23550185
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Chemistry related to living body
Research InstitutionHokkaido University

Principal Investigator

FUJITANI Naoki  北海道大学, 先端生命科学研究科(研究院), 特任助教 (10374191)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2013: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2012: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2011: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywords糖脂質 / 質量分析 / メタボローム解析 / 質量分析法 / 核磁気共鳴法
Research Abstract

Characterization of cells was performed by the comprehensive and quantitative analyses of glycosphingolipids which are ubiquitously expressed in all kinds of cell. Since glycolipids are the representative of secondary metabolites, the comprehensive analysis is intended to indicate briefly the state of the cell. Quantitative structural analyses were performed using mass spectrometry. In order to simplify the distribution of molecular masses of glycosphingolipids (elimination of structural diversities), enzymatic reaction system to digest efficiently of ceramide moieties in glycosphingolipids was established, enabling to analyze the glycan parts only. As a result, the expression level and structure of glycosphingolipids of each cell is highly cell-specific, and statistical analysis of the quantitative data showed that it makes it possible to classify and delineate the cells efficiently.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (10 results)

All 2013 2012 2011

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (6 results) Patent(Industrial Property Rights) (1 results) (of which Overseas: 1 results)

  • [Journal Article] Total cellular glycomics allows characterizing cells and streamlining the discovery process for cellular biomarkers2013

    • Author(s)
      Fujitani, N., Furukawa, J., 他10名
    • Journal Title

      Proceedings of the National Academy of Sciences of the United States of America

      Volume: 110 Issue: 6 Pages: 2105-2110

    • DOI

      10.1073/pnas.1214233110

    • NAID

      120005326735

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Recent advances in cellular glycomic analyses2013

    • Author(s)
      Furukawa, J., Fujitani, N., Shinohara, Y.
    • Journal Title

      Biomolecules

      Volume: 3 Issue: 1 Pages: 198-225

    • DOI

      10.3390/biom3010198

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] QualitativeandQuantitative Cellular Glycomics of Glycosphingolipids Based on Rhodococcal Endoglycosylceramidase-assisted Glycan Cleavage, Glycoblotting-assisted Sample Preparation, and Matrix-assisted Laser Desorption Ionization Tandem Time-of-flight Mass Spectrometry Analysis2011

    • Author(s)
      Naoki Fujitani, Yasuhiro Takegawa, Yohei Ishibashi, Kayo Araki, Jun-ichi Furukawa, Susumu Mitsutake, Yasuyuki Igarashi, Makoto Ito, Yasuro Shinohara
    • Journal Title

      THE JOURNAL OF BIOLOGICAL CHEMISTRY

      Volume: 286 Issue: 48 Pages: 41669-41679

    • DOI

      10.1074/jbc.m111.301796

    • Related Report
      2013 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Presentation] 総合的な複合糖質糖鎖プロファイリングによる細胞の分類とバイオマーカー探索2012

    • Author(s)
      藤谷直樹、古川潤一, 他5名
    • Organizer
      第31回日本糖質学会年会
    • Place of Presentation
      鹿児島市民文化ホール(鹿児島市)
    • Related Report
      2013 Final Research Report
  • [Presentation] 総合的な複合糖質糖鎖プロファイリングによる細胞の分類とバイオマーカー探索2012

    • Author(s)
      藤谷直樹、古川潤一、荒木香代、 藤岡剛、伊東信、中村幸夫、篠原康郎
    • Organizer
      第31回日本糖質学会年会
    • Place of Presentation
      鹿児島市民文化ホール(鹿児島市)
    • Related Report
      2012 Research-status Report
  • [Presentation] スフィンゴ糖脂質のグライコミクスによる細胞の解析・定義2011

    • Author(s)
      藤谷直樹、石橋洋平, 他6名
    • Organizer
      第4回セラミド研究会
    • Place of Presentation
      北海道大学学術交流会館(札幌市)
    • Related Report
      2013 Final Research Report
  • [Presentation] スフィンゴ糖脂質のグライコミクスによる細胞の解析・定義2011

    • Author(s)
      藤谷直樹、荒木香代, 他3名
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都国際会議場(京都市)
    • Related Report
      2013 Final Research Report
  • [Presentation] スフィンゴ糖脂質のグライコミクスによる細胞の解析・定義2011

    • Author(s)
      藤谷直樹、石橋洋平、荒木香代、古川潤一、光武進、五十嵐靖之、伊東信、篠原康郎
    • Organizer
      第4回セラミド研究会
    • Place of Presentation
      北海道大学(札幌市)
    • Related Report
      2011 Research-status Report
  • [Presentation] スフィンゴ糖脂質のグライコミクスによる細胞の解析・定義2011

    • Author(s)
      藤谷直樹、荒木香代、古川潤一、伊東信、篠原康郎
    • Organizer
      第84回日本生化学会大会 2011/9/21~24
    • Place of Presentation
      京都国際会議場(京都市)
    • Related Report
      2011 Research-status Report
  • [Patent(Industrial Property Rights)] Method for selecting pluripotent stem cell2012

    • Inventor(s)
      Shinohara, T., Furukawa, J., Fujitani, N., Araki, K., Nakamura, Y.
    • Industrial Property Rights Holder
      Shinohara, T., Furukawa, J., Fujitani, N., Araki, K., Nakamura, Y.
    • Industrial Property Rights Type
      特許
    • Filing Date
      2012-11-05
    • Related Report
      2013 Final Research Report
    • Overseas

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Published: 2011-08-05   Modified: 2019-07-29  

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