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Molecular characterization of regulatory genes for nicotine biosynthesis in tobacco

Research Project

Project/Area Number 23570055
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Plant molecular biology/Plant physiology
Research InstitutionNara Institute of Science and Technology

Principal Investigator

SHOJI Tsubasa  奈良先端科学技術大学院大学, バイオサイエンス研究科, 助教 (40343272)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2013: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2012: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2011: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords転写因子 / アルカロイド / タバコ / ジャスモン酸 / ERF転写因子 / 塩ストレス / 分子進化 / ニコチン
Research Abstract

Transcription factors (TFs) recognize target DNA sequences with distinct DNA-binding domains (DBDs). The DBD of Arabidopsis (Arabidopsis thaliana) ETHYLENE RESPONSE FACTOR1 (AtERF1) uses three consecutive beta-strands to recognize a GCC-containing sequence, but tobacco (Nicotiana tabacum) ERF189 and periwinkle (Catharanthus roseus) Octadecanoid-derivative Responsive Catharanthus AP2-domain protein3 (ORCA3) of the same TF subgroup appear to target similar but divergent DNA sequences. Here, we examined how DNA-binding specificities of these TFs have diverged in each plant lineage to regulate distinct defense metabolisms. Extensive mutational analyses of these DBDs suggest that two modes of protein-DNA interactions independently contribute to binding specificity and affinity Divergent DNA-binding specificities of the ERFs may have arisen through mutational changes of these amino acid residues.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (47 results)

All 2014 2013 2012 2011 Other

All Journal Article (18 results) (of which Peer Reviewed: 17 results) Presentation (22 results) (of which Invited: 1 results) Book (6 results) Remarks (1 results)

  • [Journal Article] Molecular evolution of N-methylputrescine oxidase2014

    • Author(s)
      Maliwan N, Kato K, Shoji T, Hashimoto T
    • Journal Title

      Plant Cell Physiol.

      Volume: 55 Pages: 436-444

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Molecular evolution of N-methylputrescine oxidase in tobacc2014

    • Author(s)
      Naconsie M, Kato K, Shoji T, Hashimoto T
    • Journal Title

      Plant and Cell Physiology

      Volume: 162 Pages: 436-444

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Divergent DNA-binding specificities of a group of ETHYLENE RESPONSE FACTOR transcription factors involved in plant defense2013

    • Author(s)
      Shoji T, Mishima M Hashimoto T
    • Journal Title

      Plant Physiol.

      Volume: 162 Pages: 977-990

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Smoking out the masters; transcriptional regulators for nicotine biosynthesis in tobacco2013

    • Author(s)
      Shoji T & Hashimoto T
    • Journal Title

      Plant Biotechnol.

      Volume: 30 Pages: 217-224

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Smoking out the masters: transcription factors for nicotine biosynthesis in tobacco2013

    • Author(s)
      Shoji, T and Hashimoto, T.
    • Journal Title

      Plant Biotechnology

      Volume: 30 Pages: 217-224

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Non-functionalization of two CYP82E nicotine N-demethylase genes abolishes nornicotine formation in Nicotiana langsdorffii2012

    • Author(s)
      Pakdeechanuan P, Teoh S, Shoji T, Hashimoto T
    • Journal Title

      Plant Cell Physiol.

      Volume: 12 Pages: 2038-2046

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Root-to-shoot translocation of alkaloids is dominantly suppressed in Nicotiana alata2012

    • Author(s)
      Pakdeechanuan P, Shoji T, Hashimoto T
    • Journal Title

      Plant Cell Physiol.

      Volume: 53 Pages: 1247-1254

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] DNA binding and transcriptional activation properties of tobacco NIC2-locus ERF189 and related proteins2012

    • Author(s)
      Shoji T & Hashimoto T
    • Journal Title

      Plant Biotechnol.

      Volume: 29 Pages: 3542-3545

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Root-to-shoot translocation of alkaloids is dominantly suppressed in Nicotiana alata2012

    • Author(s)
      Pakdeechanuan P, Shoji T, Hashimoto T
    • Journal Title

      Plant and Cell Physiology

      Volume: 53 Pages: 1247-1254

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Non-functionalization of two CYP82E nicotine N-demethylase genes abolishes nornicotine formation in Nicotiana langsdorffii2012

    • Author(s)
      Pakdeechanuan P, Teoh S, Shoji T, Hashimoto T
    • Journal Title

      Plant and Cell Physiology

      Volume: 53 Pages: 2038-2046

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] DNA-binding and transcriptional activation properties of tobacco NIC2-locus ERF189 and related transcription factors.2012

    • Author(s)
      Shoji T, Hashimoto T
    • Journal Title

      Plant Biotechnology

      Volume: 29 Pages: 35-42

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] ニコチン生合成のマスター転写因子2011

    • Author(s)
      庄司翼, 橋本隆
    • Journal Title

      化学と生物

      Volume: 11 Pages: 778-783

    • NAID

      10029873661

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] ニコチン生合成のマスター遺伝子:低ニコチン変異体からのアプローチ2011

    • Author(s)
      庄司翼, 橋本隆
    • Journal Title

      BSJ-Review

      Volume: 2 Pages: 30-37

    • Related Report
      2013 Final Research Report
  • [Journal Article] Recruitment of a duplicated primary metabolism gene into the nicotine biosynthesis regulon in tobacco2011

    • Author(s)
      Shoji T, Hashimoto T
    • Journal Title

      Plant J

      Volume: 67 Pages: 949-959

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Tobacco MYC2 regulates jasmonate-inducible nicotine biosynthesis genes directly and by way of the NIC2-locus ERF genes.2011

    • Author(s)
      Shoji T, Hashimoto T
    • Journal Title

      Plant Cell & Physiology

      Volume: 52 Pages: 1117-1130

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Vacuole-localized berberine bridge enzyme-like proteins are required for a late step of nicotine biosynthesis in tobacco.2011

    • Author(s)
      Kajikawa M, Shoji T, Katoh A, Hashimoto T
    • Journal Title

      Plant Physiology

      Volume: 155 Pages: 2010-2022

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] ニコチン生合成のマスター転写因子2011

    • Author(s)
      庄司翼、橋本隆
    • Journal Title

      化学と生物

      Volume: 49 Pages: 778-783

    • NAID

      10029873661

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] ニコチン生合成のマスター遺伝子:低ニコチン変異体からのアプローチ2011

    • Author(s)
      庄司翼、橋本隆
    • Journal Title

      BSJ-Review

      Volume: 2 Pages: 30-37

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] タバコNicotine Uptake Permease transporterの機能解析2014

    • Author(s)
      加藤啓太, 庄司翼, 士反伸和, 橋本隆
    • Organizer
      2013年度日本植物生理学会
    • Place of Presentation
      富山市
    • Year and Date
      2014-03-23
    • Related Report
      2013 Final Research Report
  • [Presentation] Salt-induced expression of NICOTINE2-locus genes encoding ETHYLENE RESPONSE FACTOR family transcription factors in tobacco2014

    • Author(s)
      庄司翼, 橋本隆
    • Organizer
      2013年度日本植物生理学会
    • Place of Presentation
      富山市
    • Year and Date
      2014-03-23
    • Related Report
      2013 Final Research Report
  • [Presentation] Regulation of alkaloid biosynthesis : evolutionary perspectives2013

    • Author(s)
      Shoji T
    • Organizer
      奈良先端未来開拓コロキウム(Deep impact of plant metabolism : going beyond diversity)
    • Place of Presentation
      生駒市
    • Year and Date
      2013-11-22
    • Related Report
      2013 Final Research Report
  • [Presentation] アミン酸化酵素MPO1とDAO(MPO2)の機能と分子進化2013

    • Author(s)
      Maliwan Naconsie, 加藤啓太, 庄司翼, 橋本隆
    • Organizer
      2013年度日本植物細胞分子生物学会
    • Place of Presentation
      札幌市
    • Year and Date
      2013-09-08
    • Related Report
      2013 Final Research Report
  • [Presentation] Characterization of tobacco MPO2 reveals the function in polyamine catabolism, rather than nicotine biosynthesis by its homolog MPO12013

    • Author(s)
      Maliwan Naconsie, 庄司翼, 橋本隆
    • Organizer
      2013年度日本植物生理学会
    • Place of Presentation
      岡山市
    • Year and Date
      2013-03-22
    • Related Report
      2013 Final Research Report
  • [Presentation] Cross-talk between JA and auxin in nicotine metabolism in tobacco2013

    • Author(s)
      加藤啓太, 庄司翼, 士反伸和, 橋本隆
    • Organizer
      2012年度日本植物生理学会
    • Place of Presentation
      岡山市
    • Year and Date
      2013-03-22
    • Related Report
      2013 Final Research Report
  • [Presentation] トマトNIC2型転写因子はどの代謝経路を標的とするのか?2013

    • Author(s)
      庄司翼, 西川渉太, 中林亮, 鈴木実, 河本晃一, 野中聡子, 松倉千昭, 斉藤和季, 橋本隆
    • Organizer
      2012年度日本植物生理学会
    • Place of Presentation
      岡山市
    • Year and Date
      2013-03-22
    • Related Report
      2013 Final Research Report
  • [Presentation] Inactivation of two CYP82E nicotine N-demethylase genes abolishes nornicotine formation in Nicotiana langsdorffii2012

    • Author(s)
      Seddon Teoh, Pathaalaporn Packdeenacaun, 庄司翼, 橋本隆
    • Organizer
      2012年度日本植物細胞分子生物学会
    • Place of Presentation
      生駒市
    • Year and Date
      2012-08-04
    • Related Report
      2013 Final Research Report
  • [Presentation] タバコ植物におけるPurine Permease Like transporterの機能解析2012

    • Author(s)
      加藤啓太, 庄司翼, 士反伸和, 橋本隆
    • Organizer
      2012年度日本植物細胞分子生物学会
    • Place of Presentation
      生駒市
    • Year and Date
      2012-08-04
    • Related Report
      2013 Final Research Report
  • [Presentation] 化学防御に関わるERF転写因子の進化2012

    • Author(s)
      庄司翼, 橋本隆
    • Organizer
      2012年度日本植物細胞分子生物学会
    • Place of Presentation
      生駒市
    • Year and Date
      2012-08-04
    • Related Report
      2013 Final Research Report
  • [Presentation] タバコのニコチン蓄積と発現制御に関する研究2012

    • Author(s)
      庄司翼
    • Organizer
      2012年度日本植物細胞分子生物学会
    • Place of Presentation
      生駒市(受賞講演)
    • Year and Date
      2012-08-04
    • Related Report
      2013 Final Research Report
  • [Presentation] NIC2型転写因子のトマトにおける標的代謝系の検索2012

    • Author(s)
      庄司翼
    • Organizer
      2012年度日本植物細胞分子生物学会
    • Place of Presentation
      生駒市
    • Year and Date
      2012-08-04
    • Related Report
      2013 Final Research Report
  • [Presentation] Jasmonate-induced nicotine biosynthesis in tobacco2012

    • Author(s)
      Shoji T
    • Organizer
      Workshop sponsored by IPSR "Jasmatate signaling and plant defense against insect herbivores"(招待講演)
    • Place of Presentation
      岡山県倉敷市
    • Year and Date
      2012-02-24
    • Related Report
      2011 Research-status Report
  • [Presentation] Jasmatate signaling and plant defense against insect herbivores2012

    • Author(s)
      Shoji T
    • Organizer
      Jasmonate-induced nicotine biosynthesis in tobacco Workshop sponsored by IPSR
    • Place of Presentation
      倉敷市
    • Year and Date
      2012-02-11
    • Related Report
      2013 Final Research Report
  • [Presentation] タバコMYC2によるニコチン生合成制御2012

    • Author(s)
      庄司翼、橋本隆
    • Organizer
      日本植物生理学会
    • Place of Presentation
      京都府京都市
    • Related Report
      2011 Research-status Report
  • [Presentation] Purine Permease -Like transporters facilitate nicotine uptake in tobacco roots2012

    • Author(s)
      加藤啓太、庄司翼、士反伸和、橋本隆
    • Organizer
      日本植物生理学会
    • Place of Presentation
      京都府京都市
    • Related Report
      2011 Research-status Report
  • [Presentation] 2つの転写因子によるニコチン生合成制御2012

    • Author(s)
      庄司翼、橋本隆
    • Organizer
      日本農芸化学学会
    • Place of Presentation
      京都府京都市
    • Related Report
      2011 Research-status Report
  • [Presentation] タバコアルカロイド生合成のマスター転写因子2011

    • Author(s)
      庄司翼
    • Organizer
      日本植物学会(招待講演)
    • Place of Presentation
      東京都世田谷区
    • Year and Date
      2011-09-17
    • Related Report
      2011 Research-status Report
  • [Presentation] 一次代謝系遺伝子のニコチン生合成レギュロンへの取り込み2011

    • Author(s)
      庄司翼、橋本隆
    • Organizer
      日本植物細胞分子生物学会
    • Place of Presentation
      福岡県博多市
    • Year and Date
      2011-09-06
    • Related Report
      2011 Research-status Report
  • [Presentation] Novel genes involved in nicotine biosynthesis in tobacco2011

    • Author(s)
      加藤啓太、Teoh Seddon, 庄司翼、梶川昌考、原田和生、平田収正、橋本隆
    • Organizer
      日本植物細胞分子生物学会
    • Place of Presentation
      福岡県博多市
    • Year and Date
      2011-09-06
    • Related Report
      2011 Research-status Report
  • [Presentation] ニコチン生合成の分子制御:変異体からのアプローチ2011

    • Author(s)
      庄司翼
    • Organizer
      形質転換植物デザイン研究拠点公開シンポジウム2、形質転換植物のデザイン:基礎研究から実用化に向けて(招待講演)
    • Place of Presentation
      東京都台東区
    • Year and Date
      2011-07-12
    • Related Report
      2011 Research-status Report
  • [Presentation] Regulation of alkaloid biosynthesis: evolutionary perspectives

    • Author(s)
      庄司翼
    • Organizer
      奈良先端未来開拓コロキウム(Deep impact of plant metabolism: going beyond diversity)
    • Place of Presentation
      生駒市
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Book] ATP-binding cassette and multidrug and toxic compound extrusion transporters in plants : a common theme among diverse detoxification mechanisms2014

    • Author(s)
      Shoji T
    • Publisher
      Int. Rev. Cell Mol. Biol.
    • Related Report
      2013 Final Research Report
  • [Book] Polyamine-derived alkaloids in plants : molecular elucidation of biosynthesis. In Polyamines, a universal molecular nexus for growth, survival and specialized metabolism2014

    • Author(s)
      Shoji T & Hashimoto T
    • Publisher
      Springer(印刷中)
    • Related Report
      2013 Final Research Report
  • [Book] Herbaceous Plants: Cultivation Methods, Grazing and Enviromental Impacts2014

    • Author(s)
      Shoji, T and Hashimoto, T.
    • Total Pages
      29
    • Publisher
      Nova Biomedical
    • Related Report
      2013 Annual Research Report
  • [Book] Biosynthesis and regulation of tobacco alkaloids In Herbaceous Plants : Cultivation Methods, Grazing and Enviromental Impacts2013

    • Author(s)
      Shoji T & Hashimoto T
    • Publisher
      Nova Biomedical
    • Related Report
      2013 Final Research Report
  • [Book] Jasmonate-responsive transcription factors : new tools for metabolic engineering and gene discovery. In Biotechnology for Medicinal Plants : Micropropagation and Improvement2012

    • Author(s)
      Shoji T & Hashimoto T
    • Publisher
      Springer
    • Related Report
      2013 Final Research Report
  • [Book] Plant Metabolism and Biotechnology2011

    • Author(s)
      Shoji T, Hashimoto T
    • Publisher
      Nicotine biosynthesis
    • Related Report
      2011 Research-status Report
  • [Remarks]

    • Related Report
      2013 Final Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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