Conformational change of DNA bound to transcription factor response to environmental change
| Project/Area Number |
23570136
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| Research Category |
Grant-in-Aid for Scientific Research (C)
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| Allocation Type | Multi-year Fund |
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| Section | 一般 |
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| Research Field |
Structural biochemistry
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| Research Institution | Osaka University |
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Principal Investigator |
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| Project Period (FY) |
2011 – 2013
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| Project Status |
Completed (Fiscal Year 2013)
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| Budget Amount *help |
¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2013: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2012: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2011: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
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| Keywords | 転写因子 / 活性酸素 / 鉄イオウクラスター / プロモーター / DNA / パルスラジオリシス / 一酸化窒素 / ＤＮＡ / 酸化ストレス / スーパーオキサイド / 酸化還元 |
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| Research Abstract |
The [2Fe-2S] transcriptional factor SoxR functions as a sensor of oxidative stress in Escherichia coli. In the oxidized state, transcription is activated by distorting the target DNA promoter region to initiate transcription by RNA polymerase, while the inactive reduced state of the protein remains uncharacterized. The redox-dependent conformational change of the promoter DNA was directly observed by site-specifically replacing the adenine and cytosine bases of the promoter oligonucleotide with the fluorescent probes 2-aminopurine (2Ap) and pyrrolo-dC, respectively. Reduction of the [2Fe-2S] cluster in SoxR-DNA complex dramatically weakened the fluorescence intensity of the 2Ap moieties incorporated into the central part of the DNA. These results strongly suggested that the redox change caused a large conformational change within the region confined to the central A-T base pairs in the promoter region of the DNA.
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Report
(4 results)
Research Products
(31 results)
