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NMR study for the whole structure of human general transcription factor TFIIE

Research Project

Project/Area Number 23570144
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Structural biochemistry
Research InstitutionYokohama City University

Principal Investigator

OKUDA Masahiko  横浜市立大学, 生命ナノシステム科学研究科, 特任助教 (60448686)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2013: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2012: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2011: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
KeywordsNMR / 転写 / 基本転写 / 立体構造 / TFIIE / TFIIH / 基本転写因子 / 転写開始 / 天然変性領域 / タンパク質 / 溶液構造
Research Abstract

General transcription factors are necessary for transcription initiation of protein coding genes by RNA polymerase II. In this study, I structurally analyzed the whole structure of human TFIIE, a member of the general transcription factors by using NMR. Human TFIIE is a heterodimer, consisting of an alpha and a beta subunit. TFIIE has large molecular weight (~80kDa) and shows the tendency to aggregate. Although these characters are disadvantage for structural analysis by NMR, use of the latest NMR technologies and high magnetic filed NMR machines enabled to gain structural information on three functional domains of TFIIE. I was able to determine a high resolution tertiary structure of one of three functional domains in the intact TFIIE complex.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (3 results)

All 2011

All Presentation (3 results)

  • [Presentation] Structural analysis for 85 kDa protein complex, general transcription factor TFIIE by NMR spectroscopy2011

    • Author(s)
      Okuda M, Moriwaki Y, Kataoka M, Nagadoi A, Tanaka A, OhkumaY, Nishimura Y.
    • Organizer
      The International Symposium on Nuclear Magnetic Resonance
    • Place of Presentation
      Osanbashi Hall (Yokohama, Japan)
    • Year and Date
      2011-11-16
    • Related Report
      2013 Final Research Report 2011 Research-status Report
  • [Presentation] 本転写因子TFIIEαのイオンモビリティ質量分析2011

    • Author(s)
      奥田昌彦、廣瀬賢治、川瀬泰司、押方基二、西村善文基
    • Organizer
      日本生化学学会
    • Place of Presentation
      国立京都国際会館
    • Year and Date
      2011-09-23
    • Related Report
      2013 Final Research Report
  • [Presentation] 基本転写因子TFIIEαのイオンモビリティ質量分析2011

    • Author(s)
      奥田昌彦、廣瀬賢治、川瀬泰司、押方基二、西村善文
    • Organizer
      日本生化学学会
    • Place of Presentation
      国立京都国際会館
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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