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A new translational start mechanism in chloroplasts

Research Project

Project/Area Number 23570213
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Molecular biology
Research InstitutionNagoya City University

Principal Investigator

YUKAWA Maki  名古屋市立大学, システム自然科学研究科, 研究員 (00448705)

Co-Investigator(Renkei-kenkyūsha) SUGIURA Masahiro  名古屋市立大学, 大学院システム自然科学研究科, 名誉教授 (80027044)
Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2013: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2012: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords葉緑体 / 翻訳開始 / 重複遺伝子 / in vitro系
Research Abstract

Generally, translation of one protein-coding region (cistron) starts by only one mechanism, and translation of the downstream cistron in overlapping mRNA is extremely low in comparison with upstream cistron's activity. In partially overlapping ndhC/ndhK mRNA of the tobacco chloroplast, translation of both cistrons is almost equal, so we formed a new hypothesis 'Two translational start mechanisms in one cistron'.
In this study, we revealed that (1) some ribosomes enter at an internal in-frame AUG codon that is located in the middle of upper ndhC cistron, (2) ribosomes translate the 3'half of the ndhC cistron and some ribosomes resume downstream ndhK translation, (3) chloroplast specific trans-acting factor is not necessary in the additional molecular mechanism to translate the downstream cistron which was different from the normal translational coupling mechanism.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (16 results)

All 2014 2013 2012 2011 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (14 results) Remarks (1 results)

  • [Journal Article] An additional pathway to translate the downstream ndhK cistron in partially overlapping ndhC-ndhK mRNAs in chloroplasts2013

    • Author(s)
      Yukawa, M. and M. Sugiura
    • Journal Title

      Proc. Natl. Acad. Sci. USA.

      Volume: 110 Issue: 14 Pages: 5701-5706

    • DOI

      10.1073/pnas.1219914110

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Presentation] タバコ葉緑in vitroスプライシング系の改良2014

    • Author(s)
      湯川眞希, 長谷川桂子, 杉浦昌弘
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山
    • Related Report
      2013 Final Research Report
  • [Presentation] Translation of Overlapping Genes in Chloroplasts–Novel Pathway to Translate the Downstream Cistron2014

    • Author(s)
      Yukawa, M. and Sugiura, M.
    • Organizer
      Plant and Animal Genome XXII
    • Place of Presentation
      San Diego, CA, USA (poster, P1163)
    • Related Report
      2013 Final Research Report
  • [Presentation] Translation of Overlapping Genes in Chloroplasts–Novel Pathway to Translate the Downstream Cistron2014

    • Author(s)
      Yukawa, M. and Sugiura, M.
    • Organizer
      Plant and Animal Genome XXII
    • Place of Presentation
      San Diego, CA, USA (Sugiura, invited speaker)
    • Related Report
      2013 Final Research Report
  • [Presentation] Translation of Overlapping Genes in Chloroplasts - Novel Pathway to Translate the Downstream Cistron.2014

    • Author(s)
      Yukawa Maki and Masahiro Sugiura
    • Organizer
      Plant and Animal Genome XXII
    • Place of Presentation
      San Diego, CA, USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] タバコ葉緑 in vitro スプライシング系の改良2014

    • Author(s)
      湯川 眞希、長谷川桂子、杉浦 昌弘
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山市、富山大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] Analysis of the translational control mechanism on Arabidopsis rbcS mRNAs2013

    • Author(s)
      Yukawa, M. and Sugiura, M.
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Year and Date
      2013-03-23
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] タバコ細胞質由来のin vitro翻訳解析法の改良2012

    • Author(s)
      夏目大輔, Xin He, 湯川眞希, 湯川泰
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Year and Date
      2012-12-14
    • Related Report
      2013 Final Research Report
  • [Presentation] タバコ葉緑体ndhC-ndhK mRNAに見られるオルタナティブイニシエーションと終止コドンに依存した翻訳開始2012

    • Author(s)
      湯川眞希, 杉浦昌弘
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Year and Date
      2012-12-13
    • Related Report
      2013 Final Research Report
  • [Presentation] タバコ葉緑体 ndhC-ndhK mRNA に見られるオルタナティブイニシエーションと終止コドンに依存した翻訳開始2012

    • Author(s)
      湯川 眞希、杉浦 昌弘
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Research-status Report
  • [Presentation] タバコ細胞質由来のin vitro 翻訳解析法の改良2012

    • Author(s)
      夏目大輔、Xin He、湯川 眞希、湯川 泰
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Research-status Report
  • [Presentation] タバコ葉緑体ndhC-K mRNAに見られる新しい終止コドン依存型翻訳2011

    • Author(s)
      湯川眞希, 杉浦昌弘
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2013 Final Research Report
  • [Presentation] 植物培養細胞からの細胞質in vitro翻訳解析法の開発2011

    • Author(s)
      Xin He, 山本裕子, 湯川眞希, 杉浦昌弘, 湯川泰
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-15
    • Related Report
      2013 Final Research Report
  • [Presentation] タバコ葉緑体ndhC-K mRNAに見られる新しい終止コドン依存型翻訳

    • Author(s)
      湯川眞希 杉浦昌弘
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2011 Research-status Report
  • [Presentation] 植物培養細胞からの細胞質 in vitro 翻訳解析法の開発

    • Author(s)
      Xin He、山本 裕子、湯川 眞希、杉浦 昌弘、湯川 泰
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2011 Research-status Report
  • [Remarks]

    • URL

      http://www.nsc.nagoya-cu.ac.jp/~yyuk/

    • Related Report
      2013 Final Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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