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Positional cloning and functional analysis of CR-genes in Brassica oleracea

Research Project

Project/Area Number 23580003
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Breeding science
Research InstitutionNiigata University

Principal Investigator

OKAZAKI KEIICHI  新潟大学, 自然科学系, 教授 (20270936)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2013: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2012: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2011: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords根こぶ病 / Brassica oleracea / 病害抵抗性遺伝子 / 遺伝分析 / アブラナ科作物
Research Abstract

In order to isolate clubroot resistance gene (CR-gene) in cabbage, we mapped 30 markers that can detected polymorphism in CR-gene regions of the susceptible and resistance parents. The recombinant plants, which had crossovers in the CR-gene region, were genotyped using our designed markers to obtain graph genotypes. The inoculation to the graph genotypes revealed that the CR-gene region is located around the KBr marker. We determined the DNA sequence of the CR-gene region from next-generation sequencing analysis of the susceptible parent resistance. The candidate gene region will be sub-cloned from BAC and cosmid clones, already cloned and contained the target region.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (9 results)

All 2013 2012 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (7 results)

  • [Journal Article] Accumulation of quantitative trait loci conferring broad- spectrum clubroot resistance in Brassica oleracea2013

    • Author(s)
      H. TOMITA, M. SHIMIZU, MAU. DOULLAH, R. FUJIMOTO, K. OKAZAKI
    • Journal Title

      Mol Breeding

      Volume: 32

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Accumulation of quantitative trait loci conferring broad- spectrum clubroot resistance in Brassica oleracea2013

    • Author(s)
      H. TOMITA, M. SHIMIZU, MA U. DOULLAH, R. FUJIMOTO, K. OKAZAKI
    • Journal Title

      Mol Breeding

      Volume: 32 Issue: 4 Pages: 889-900

    • DOI

      10.1007/s11032-013-9918-9

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] Recent progress of clubroot resistance breeding through marker-assisted selection in Brassica oleracea and B,rapa2012

    • Author(s)
      MD.ASAD-UD-DOULLAH, H. TOMITA, M. SHIMIZU, MATSUMOTO, R. FUJIMOTO AND K. OKAZAKI
    • Organizer
      5th International symposium for the development of integrated pest management for sustainable agriculture in Asia and Africa
    • Place of Presentation
      Kota Kinabalu,Malaysia
    • Year and Date
      2012-12-18
    • Related Report
      2013 Final Research Report
  • [Presentation] Towards cloning a clubroot resistance minor gene PbBo(Anju)4 in Brassica oleracea2012

    • Author(s)
      OMITA, M. SHIMIZU, M. A. UD-DOLLAH, R. FUJIMOTO and K. OKAZAKI
    • Organizer
      International symposium on Comparative Genomics and Breeding of Brassicaceae crops
    • Place of Presentation
      Sendai, Japan
    • Year and Date
      2012-12-18
    • Related Report
      2013 Final Research Report
  • [Presentation] Brassica oleracea根こぶ病抵抗性遺伝子の集積による抵抗性育種2012

    • Author(s)
      富田寛也・清水元樹・藤本龍・U. Doullah MA・松本哲・岡崎桂一
    • Organizer
      日本育種学会
    • Place of Presentation
      宇都宮大学
    • Year and Date
      2012-03-29
    • Related Report
      2013 Final Research Report
  • [Presentation] Recent progress of clubroot resistance breeding through marker-assisted selection in Brassica oleracea and B. rapa2012

    • Author(s)
      Md.Asad-ud-doullah, H Tomita, M Shimizu, S Matsumoto, R Fujimoto and K Okazaki
    • Organizer
      5th International symposium for the development of integrated pest management for sustainable agriculture in Asia and Africa(5th IPM)
    • Place of Presentation
      マレーシア
    • Related Report
      2012 Research-status Report
  • [Presentation] Collinearity among a short segment having the major recognition gene complex of Arabidopsis thaliana chromosome 4 and triplicated regions within the Brassica oleracea and B. rapa.

    • Author(s)
      M. Shimizu, H. Tomita, Z. Pu, R. Fujimoto and K. Okazaki
    • Organizer
      International symposium on Comparative Genomics and Breeding of Brassicaceae crops. Japan
    • Place of Presentation
      仙台
    • Related Report
      2012 Research-status Report
  • [Presentation] Towards cloning a clubroot resistance minor gene PbBo(Anju)4 in Brassica oleracea

    • Author(s)
      H. Tomita, M. Shimizu, Md.Asad-ud-doullah, R. Fujimoto and K. Okazaki
    • Organizer
      International symposium on Comparative Genomics and Breeding of Brassicaceae crops. Japan
    • Place of Presentation
      仙台
    • Related Report
      2012 Research-status Report
  • [Presentation] Brassica oleracea根こぶ病抵抗性遺伝子の集積による抵抗性育種

    • Author(s)
      富田寛也,清水元樹,藤本龍,MAU Doullah,松元哲,岡崎桂一
    • Organizer
      日本育種学会第121回講演会
    • Place of Presentation
      宇都宮大学
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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