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Structural based fruit softening mechanism; the model of tomato fruit softening during maturation

Research Project

Project/Area Number 23580054
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Horticulture/Landscape architecture
Research InstitutionKinki University

Principal Investigator

ISHIMARU Megumi  近畿大学, 生物理工学部, 准教授 (90326281)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2012: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2011: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords果実軟化 / 細胞壁 / トマト果実 / β-ガラクトシダーゼ / 細胞壁分解酵素 / 基質特異性 / 構造解析
Research Abstract

In tomato fruit, beta-galactosidase 4 (TBG4) is an enzyme responsible for fruit softening through the degradation of beta-(1,4)-galactan in the pericarp cell wall. To gain structural insight into the substrate specificity, we determined the crystal structures of TBG4 and its complex with beta-D-galactose. TBG4 was composed of a catalytic TIM barrel domain followed by three beta-sandwich domains. This structure is similar to other beta-galactosidase belong to GH35 families.
In addition, we determined the enzymatic properties and substrate specificities of TBG1. TBG4 has substrate recognition to beta-(1,4)-linkage, however, TBG1 has beta-(1,3) and beta-(1,6)-likage substrate.
In these results, TBG's act on the tomato cell wall during fruits development and maturation, and seberal stage of tomato fruits cell walls construct/reconstruct to some components sugar as a substrate against TBG's.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (11 results)

All 2014 2013 2011 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (9 results) (of which Invited: 2 results)

  • [Journal Article] Enzymatic activity and substrate specificity of the recombinant tomato β-galactosidase 12014

    • Author(s)
      Masahiro Eda, Megumi Ishimaru, Toshiji Tada, Tatsuji Sakamoto, Toshihisa Kotake, Yoichi Tsumuraya, Andrew J. Mort, Kenneth C. Gross
    • Journal Title

      Journal of Plant Physiology

      Volume: 未定

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enzymatic activity and substrate specificity of the recombinant tomatoβ-galactosidase 1

    • Author(s)
      Masahiro Eda, Megumi Ishimaru, Toshiji Tada, Tatsuji Sakamoto, Toshihisa Kotake, Yoichi Tsumuraya, Andrew J. Mort, Kenneth C. Gross
    • Journal Title

      J. Plant. Physiol

      Volume: (in press)

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Presentation] Crystal structures of a glycoside hydrolase family 35β-galactosidase from Solanum lycopersicum2013

    • Author(s)
      Megumi Ishimaru, Masahiro Eda, Toshiji Tada
    • Organizer
      SEAsia
    • Place of Presentation
      ラオス
    • Year and Date
      2013-12-05
    • Related Report
      2013 Final Research Report
  • [Presentation] トマトβ-ガラクトシダーゼ4の結晶構造解析2013

    • Author(s)
      石丸恵,枝真広,多田俊治
    • Organizer
      園芸学会平成25年度秋季大会
    • Place of Presentation
      岩手
    • Year and Date
      2013-09-21
    • Related Report
      2013 Final Research Report
  • [Presentation] Crystal structures of a glycoside hydrolase family 35β-galactosidase from Solanum lycopersicum2013

    • Author(s)
      石丸恵
    • Organizer
      UK-Japan joint meeting on Plant Cell Biologyケンブリッジ大学
    • Place of Presentation
      イギリス(ケンブリッジ)
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Crystal structures of a glycoside hydrolase family 35 β-galactosidase from2013

    • Author(s)
      Megumi Ishimaru
    • Organizer
      UK-Japan joint meeting on Plant Cell Biology
    • Place of Presentation
      イギリス(ケンブリッジ大学)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] トマトβ-ガラクトシダーゼ4の結晶構造解析2013

    • Author(s)
      石丸 恵,枝 真広,多田俊治
    • Organizer
      園芸学会平成25年度秋季大会
    • Place of Presentation
      岩手大学(盛岡)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Crystallization and preliminary X-ray diffraction analysis of tomatoβ-galactosidase 42011

    • Author(s)
      EGUMI ISHIMARU, MASAHIRO EDA, HIDEMI IZUMI
    • Organizer
      アメリカ園芸学会
    • Place of Presentation
      アメリカ(ハワイ)
    • Year and Date
      2011-09-27
    • Related Report
      2013 Final Research Report
  • [Presentation] トマトβ-ガラクトシダーゼ(TBG)4の結晶化2011

    • Author(s)
      石丸恵,枝真広,多田俊治
    • Organizer
      日本食品保蔵科学会第60回大会
    • Place of Presentation
      北海道
    • Year and Date
      2011-06-18
    • Related Report
      2013 Final Research Report
  • [Presentation] トマトβ-galactosidase (TBG) 4の結晶化2011

    • Author(s)
      石丸 恵・枝 真広・多田俊治
    • Organizer
      日本食品保蔵科学会第60回大会
    • Place of Presentation
      東京農業大学(北海道)
    • Related Report
      2011 Research-status Report
  • [Presentation] Crystallization and preliminary X-ray diffraction analysis of tomato β-galactosidase 42011

    • Author(s)
      )Ishimaru M., Eda M., Izumi H.
    • Organizer
      The American Society for Horticultural Science Annual Conference
    • Place of Presentation
      アメリカ合衆国(ハワイ島)
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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