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Higher-order Chromatin Structure Controls T Helper Cell Differentiation

Research Project

Project/Area Number 23590562
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Immunology
Research InstitutionYamagata University

Principal Investigator

SEKIMATA Masayuki  山形大学, 医学部, 教務補佐員 (80250190)

Co-Investigator(Kenkyū-buntansha) SEKIMATA Akiko  山形大学, 医学部, 准教授 (50321823)
Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2013: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2012: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2011: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywords遺伝子発現 / エピジェネティクス / 細胞分化 / クロマチン / ヘルパーT細胞 / サイトカイン / 転写制御 / 分化制御 / 国際情報交換 / 高次クロマチン構造 / 国際情報交流
Research Abstract

The formation of higher-order chromatin structure composed of cis-regulatory elements including enhancers, silencers, and insulators play important roles in regulating cell lineage-specific activation and repression of genes. Cytokine genes expressed in T-helper cells are particularly attractive models to study lineage specific regulation by higher-order chromatin structure. In this study, we identified several cis-regulatory elements at the mouse IFN-g gene locus including IFN-g and IL-22. These elements functionally regulated lineage-specific gene expression as enhancers and silencers. Moreover, we try to generate mice with a conditional deletion of an insulator located 70 kb upstream of the IFN-g gene that is a site for recruitment of the factor CTCF, which may enable us to define the epigenetic and functional consequences of lineage-specific gene expression.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (9 results)

All 2013 2012 2011 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (5 results) Remarks (1 results)

  • [Journal Article] Constructing a contemporary gene-environmental cohort : study design of the Yamagata Molecular Epidemiological Cohort Study2013

    • Author(s)
      Yamagata University Genomic Cohort Consortium, Sekimata,A., Narimutsu, H.
    • Journal Title

      J.Hum.Genet

      Volume: 58 Pages: 54-56

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] CpG methylation prevents YY1-mediated transcriptional activation of the vimentin promoter2011

    • Author(s)
      Sekimata,M., Sekimata,A., Homma,Y.
    • Journal Title

      Biochem.Biophys.Res.Commun

      Volume: 414 Pages: 767-772

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] CpG methylation prevents YY1-mediated transcriptional activation of the vimentin promoter2011

    • Author(s)
      M Sekimata, A Murakami-Sekimata, Y Homma
    • Journal Title

      Biochem Biophys Res Commun

      Volume: 414 Pages: 767-772

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] インスレーター因子CTCFとマスター転写因子T-betによるIFNG遺伝子座のTh1細胞特異的高次クロマチン構造と転写制御2012

    • Author(s)
      関亦正幸
    • Organizer
      第78回日本生化学会東北支部例会
    • Place of Presentation
      山形、山形大学
    • Year and Date
      2012-05-26
    • Related Report
      2013 Final Research Report
  • [Presentation] 出芽酵母の細胞周期進行に関与するMDT1遺伝子の欠損によるタンパク質輸送変異sec12-4tsの抑圧メカニズム2012

    • Author(s)
      関亦明子、佐藤菜津美、中野明彦
    • Organizer
      第78回日本生化学会東北支部例会
    • Place of Presentation
      山形、山形大学
    • Year and Date
      2012-05-26
    • Related Report
      2013 Final Research Report
  • [Presentation] 出芽酵母タンパク質輸送変異sec12-4の細胞周期関連因子MDT1欠損による細胞周期回復について2012

    • Author(s)
      佐藤菜津美、関亦明子
    • Organizer
      第78回日本生化学会東北支部例会
    • Place of Presentation
      山形、山形大学
    • Year and Date
      2012-05-26
    • Related Report
      2013 Final Research Report
  • [Presentation] インスレーター因子CTCFとマスター転写因子T-betによるIFN-g遺伝子座のTh1細胞特異的高次クロマチン構造と転写制御2012

    • Author(s)
      関亦正幸
    • Organizer
      第78回日本生化学会東北支部会
    • Place of Presentation
      山形大学
    • Related Report
      2012 Research-status Report
  • [Presentation] 細胞周期G2/M期進行に関与するMDT1遺伝子の欠損による出芽酵母、温度感受性分泌変異sec12-4の抑圧メカニズム2011

    • Author(s)
      関亦明子、佐藤菜津美、中野明彦
    • Organizer
      第84回日本生化学
    • Place of Presentation
      京都、国立京都国際会館
    • Year and Date
      2011-09-23
    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://n-yu.jp/kansenbougyo/

    • Related Report
      2013 Final Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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