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Clinical application of gene expression signature as a predictor of recurrence in colorectal cancer

Research Project

Project/Area Number 23591962
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Digestive surgery
Research InstitutionOsaka University

Principal Investigator

TAKEMASA Ichiro  大阪大学, 医学(系)研究科(研究院), 助教 (50379252)

Co-Investigator(Kenkyū-buntansha) MIZUSHIMA Tunekazu  大阪大学, 附属病院消化器外, 講師 (00527707)
IKEDA Masataka  独立行政法人国立病院機構大阪医療センター, 外科, 研究員 (80335356)
YAMAMOTO Hirofumi  大阪大学, 附属病院消化器外, 准教授 (30322184)
SEKIMOTO Mithugu  独立行政法人国立病院機構大阪医療センター, 外科, 研究員 (10273658)
Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2012: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords大腸癌 / 予後・治療応答性 / 予測診断 / 臨床応用 / パスウェイ / 大腸がん / 遺伝子発現プロファイル / 予後予測 / 個別化医療 / 予後診断用臨床チップ / 癌の多様性 / 薬剤感受性
Research Abstract

We have been attempting to stratify curatively resected colorectal cancer(CRC) into good or poor prognoses based on gene expression signatures.Using the clinical DNA chip,we attempted to select discriminator genes,with the 150 retrospective CRC sample set,resulting 55 markers.We then applied the discriminator set to the second,150 CRC samples set in a prospective sample set for predictive accuracy and prognostic validity.Kaplan-Meyer analysis showed a significant difference between the"good signature group(low-risk)"and the "poor signature group (high risk)" (Log-rank p equal 0.0019).The multivariate Cox analyses showed the significant parameters to predict the prognosis with a hazard ratio of 3.5(95 persent confidence interval, 0.12-0.67 p=0.004). this personalized prognosis is crucial with CRC patients, the predictive performance may deserve serious consideration for possible application to clinic.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (15 results)

All 2013 2012 2011

All Journal Article (8 results) (of which Peer Reviewed: 2 results) Presentation (7 results)

  • [Journal Article] Ephrin-A1 mRNA is associated with poor prognosis of colorectal cancer2013

    • Author(s)
      Yamamoto H., Tei M., Uemura M., Takemasa I., Uemura Y., Murata K., Fukunaga M., Ohue M., Ohnishi T., Ikeda K., Kato T., Okamura S., Ikenaga M., Haraguchi N., Nishimura J., Mizushima T., Mimori K., Doki Y., Mori M.
    • Journal Title

      Int J Oncol

      Pages: 549-555

    • Related Report
      2013 Final Research Report
  • [Journal Article] Depletion of JARID1B induces cellular senescence in human colorectal cancer2013

    • Author(s)
      Ohta K., Haraguchi N., Kano Y., Kagawa Y., Konno M., Nishikawa S., Hamabe A., Hasegawa S., Ogawa H., Fukusumi T., Uemura M., Nishimura J., Hata T., Takemasa I., Mizushima T., Noguchi Y., Ozaki M., Kudo T., Sakai D., Satoh T., Fukami M., Ishii M., Yamamoto H., Doki Y., Mori M., Ishii H.
    • Journal Title

      Int J Oncol

      Pages: 1212-1218

    • Related Report
      2013 Final Research Report
  • [Journal Article] Metabolic system alterations in pancreatic cancer patient serum : potential for early detection2013

    • Author(s)
      Ritchie SA., Akita H., Takemasa I., Eguchi H., Pastural E., Nagano H., Monden M., Doki Y., Mori M., Jin W., Sajobi TT., Jayasinghe D., Chitou B., Yamazaki Y., White T., Goodenowe DB.
    • Journal Title

      BMC Cancer

    • Related Report
      2013 Final Research Report
  • [Journal Article] An Impact of Epigenetic Approaches Targeting JARID1B to Modulate Malignant Behaviors of Gastrointestinal Cancer2013

    • Author(s)
      Yamamoto H.
    • Journal Title

      Int J Oncol

      Volume: 42 Pages: 549-555

    • Related Report
      2013 Annual Research Report
  • [Journal Article] Depletion of JARID1B induces cellular senescence in human colorectal cancer.2013

    • Author(s)
      Ohta K.
    • Journal Title

      Int J Oncol

      Volume: 42 Pages: 1212-1218

    • Related Report
      2013 Annual Research Report
  • [Journal Article] Metabolic system alterations in pancreatic cancer patient serum: potential for early detection.2013

    • Author(s)
      Ritchie SA.
    • Journal Title

      BMC Cancer

      Volume: 13 Issue: 1 Pages: 416-416

    • DOI

      10.1186/1471-2407-13-416

    • Related Report
      2013 Annual Research Report
  • [Journal Article] Potential biological insights revealed by an integrated assessment of proteomic and transcriptomic data in human colorectal cancer.2012

    • Author(s)
      Takemasa I.
    • Journal Title

      Int J Oncol

      Volume: 2 Pages: 551-559

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Heterogeneity of colorectal cancers extraction of discriminator gene signatures for parsonalized of prognosis.2011

    • Author(s)
      Miyake M
    • Journal Title

      Int J Oncol

      Volume: 39 Pages: 781-789

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] O-67-3膵癌診断のためのメタボロミクス技術を用いた新規バイオマーカーの探索(一般演題)2013

    • Author(s)
      秋田裕史、永野浩昭、竹政伊知朗、濱直樹、和田浩志、川本弘一、小林省吾、江口英利、森正樹、土岐祐一郎
    • Organizer
      第68回日本消化器外科学会総会
    • Place of Presentation
      宮崎
    • Related Report
      2013 Final Research Report
  • [Presentation] An Impact of Epigenetic Approaches Targeting JARID1B to Modulate Malignant Behaviors of Gastrointestinal Cancer (Minisymposium)2013

    • Author(s)
      Ohta K., Kano Y., Konno M., Kagawa Y., Nishikawa S., Hasegawa S., Fukusumi T., Ogawa H., Hamabe A., Satoh T., Haraguchi N., Yamamoto H., Doki Y., Mori M., Ishii H.
    • Organizer
      American Association for Cancer Research(AACR) Annual Meeting 2013
    • Place of Presentation
      Washington DC, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] An Impact of Epigenetic Approaches Targeting JARID1B to Modulate Malignant Behaviors of Gastrointestinal Cancer2013

    • Author(s)
      Kano Y., Konno M., Kagawa Y., Nishikawa S., Hasegawa S., Fukusumi T., Ogawa H., Hamabe A., Satoh T., Haraguchi N., Yamamoto H., Doki Y., Mori M., Ishii H.
    • Organizer
      American Association for Cancer Research(AACR) Annual Meeting 2013
    • Place of Presentation
      Washington DC, USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] O-67-3 膵癌診断のためのメタボロミクス技術を用いた新規バイオマーカーの探索2013

    • Author(s)
      秋田裕史
    • Organizer
      第68回 日本消化器外科学会総会
    • Place of Presentation
      宮崎
    • Related Report
      2013 Annual Research Report
  • [Presentation] OSNA法を用いた新たな大腸癌リンパ節転移検査への可能性2011

    • Author(s)
      山本浩文
    • Organizer
      第66回 日本消化器外科学会
    • Place of Presentation
      名古屋
    • Related Report
      2011 Research-status Report
  • [Presentation] 大腸癌リンパ節転移におけるOSNA法を用いた新たな分子生物学的検査法の意義2011

    • Author(s)
      宮崎進
    • Organizer
      第111回 日本外科学会
    • Place of Presentation
      紙上開催
    • Related Report
      2011 Research-status Report
  • [Presentation] ヒストン脱メチル化酵素JMJD1Aの大腸癌悪性度とEMTへの関与2011

    • Author(s)
      宮崎進
    • Organizer
      第66回 日本消化器外科学会
    • Place of Presentation
      名古屋
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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