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Rapid screening of gene(s) related to the phenotype of model rats with high levels of voluntarily wheel running activity

Research Project

Project/Area Number 23650406
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Sports science
Research InstitutionThe University of Tokushima

Principal Investigator

IMOTO Issei (TACHIBANA Issei)  徳島大学, 大学院・ヘルスバイオサイエンス研究部, 教授 (30258610)

Co-Investigator(Kenkyū-buntansha) NAKAYA Yutaka  徳島大学, 大学院・ヘルスバイオサイエンス研究部, 教授 (50136222)
NIKAWA Takeshi  徳島大学, 大学院・ヘルスバイオサイエンス研究部, 教授 (20263824)
Co-Investigator(Renkei-kenkyūsha) TAJIMA Atsushi  徳島大学, 大学院・ヘルスバイオサイエンス研究部, 准教授 (10396864)
Project Period (FY) 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2011: ¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Keywords高運動習性ラット / ゲノム / 次世代シーケンサー / 連鎖解析
Research Abstract

In order to identify gene(s) and molecular pathway(s) possibly related to the phenotype of model rats with high levels of voluntarily wheel running activity(Spontaneously-Running-Tokushima-Shikoku, SPORTS) established from Wistar rats, we established a novel integrated screening system through combining exome sequencing using a next-generation sequencer, linkage analysis, and selection algorithm using genome and polymorphism databases. Through this study, we successfully established a novel screening system for rat genome analysis and identified a set of candidate genes related to the phenotype of SPORTS rats.

Report

(2 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • Research Products

    (18 results)

All 2012 2011 Other

All Journal Article (13 results) (of which Peer Reviewed: 13 results) Book (1 results) Remarks (4 results)

  • [Journal Article] The incidence of hypoplasia of the corpus callosum in patients with dup (X)(q28) involving MECP2 is associated with the location of distal breakpoints.2012

    • Author(s)
      Honda S, et al.
    • Journal Title

      Am J Med Genet

      Volume: 158A Issue: 6 Pages: 1292-1303

    • DOI

      10.1002/ajmg.a.35321

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] SIX1 promotes epithelial-mesenchymal transition in colorectal cancer through ZEB1 activation2012

    • Author(s)
      Ono H, Imoto I, Kozaki K, Tsuda H, Matsui T, Kurasawa Y, Muramatsu T, Sugihara K, Inazawa J
    • Journal Title

      Oncogene

      Volume: 31 Issue: 47 Pages: 4923-4934

    • DOI

      10.1038/onc.2011.646

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Deletion at chromosome 10p11.23-p12.1 defines characteristic phenotypes with marked midface retrusion2012

    • Author(s)
      Okamoto N, Hayashi S, Masui A, Kosaki R, Oguri I, Hasegawa T, Imoto I, Makita Y, Hata A, Moriyama K, Inazawa J
    • Journal Title

      J Hum Genet

      Volume: 57(3) Issue: 3 Pages: 191-196

    • DOI

      10.1038/jhg.2011.154

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Japanese Mental Retardation Consortium. Concomitant microduplications of MECP2 and ATRX in male patients with severe mental retardation2012

    • Author(s)
      Honda S, Satomura S, Hayashi S, Imoto I, Nakagawa E, Goto Y, Inazawa J
    • Journal Title

      J Hum Genet

      Volume: 57(1) Issue: 1 Pages: 73-77

    • DOI

      10.1038/jhg.2011.131

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Novel intragenic duplications and mutations of CASK in patients with mental retardation and microcephaly with pontine and cerebellar hypoplasia(MICPCH)2012

    • Author(s)
      Hayashi S, Okamoto N, Chinen Y, Takanashi J, Makita Y, Hata A, Imoto I, Inazawa J
    • Journal Title

      Hum Genet

      Volume: 131(1) Pages: 99-110

    • URL

      http://www.springerlink.com/content/t41q770m17509j15/?MUD=MP

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Novel intragenic duplications and mutations of CASK in patients with mental retardation and microcephaly with pontine and cerebellar hypoplasia (MICPCH)2012

    • Author(s)
      Hayashi S, et al
    • Journal Title

      Human Genet

      Volume: 131 Pages: 99-110

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Stabilization of phenotypic plasticity through mesenchymal-specific DNA hypermethylation in cancer cells2011

    • Author(s)
      Kurasawa Y
    • Journal Title

      Oncogene

      Volume: 12.31(15) Issue: 15 Pages: 1963-74

    • DOI

      10.1038/onc.2011.373

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] HECT-type ubiquitin ligase ITCH targets lysosomal-associated protein multispanning transmembrane 5(LAPTM5) and prevents LAPTM5-mediated cell death2011

    • Author(s)
      Ishihara T, Inoue J, Kozaki K, Imoto I, Inazawa J
    • Journal Title

      J Biol Chem

      Volume: 286(51) Pages: 44086-94

    • URL

      http://www.jbc.org/content/286/51/44086.long

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] miR-152 is a tumor suppressor microRNA that is silenced by DNA hypermethylation in endometrial cancer2011

    • Author(s)
      Tsuruta T, Kozaki K, Uesugi A, Furuta M, Hirasawa A, Imoto I, Susumu N, Aoki D, Inazawa J
    • Journal Title

      Cancer Res

      Volume: 71(20) Pages: 6450-62

    • URL

      http://cancerres.aacrjournals.org/content/71/20/6450.long

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] The tumor suppressive microRNA miR-218 targets the mTOR component Rictor and inhibits AKT phosphorylation in oral cancer2011

    • Author(s)
      Uesugi A, Kozaki K, Tsuruta T, Furuta M, Morita K, Imoto I, Omura K, Inazawa J
    • Journal Title

      Cancer Res

      Volume: 71(17) Pages: 5765-78

    • URL

      http://cancerres.aacrjournals.org/content/71/17/5765.long

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] HECT-type ubiquitin ligase ITCH targets lysosomal-associated protein multispanning transmembrane 5 (LAPTM5) and prevents LAPTM5-mediated cell death2011

    • Author(s)
      Ishihara T, et al
    • Journal Title

      J Biol Chem

      Volume: 286 Pages: 44086-94

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] miR-152 is a tumor suppressor microRNA that is silenced by DNA hypermethylation in endometrial cancer2011

    • Author(s)
      Tsuruta T, et al
    • Journal Title

      Cancer Res

      Volume: 71 Pages: 6450-62

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The tumor suppressive microRNA miR-218 targets the mTOR component Rictor and inhibits AKT phosphorylation in oral cancer2011

    • Author(s)
      Uesugi A, et al
    • Journal Title

      Cancer Res

      Volume: 71 Pages: 5765-78

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Book] メディカルサイエンス遺伝子検査学(IV染色体検査法-1染色体分染法-2染色法)2011

    • Author(s)
      井本逸勢
    • Publisher
      近代出版
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Remarks] ホームページ

    • URL

      http://plaza.umin.ac.jp/awahg/

    • Related Report
      2011 Final Research Report
  • [Remarks] 徳島大学・大学院ヘルスバイオサイエンス研究部・人類遺伝学

    • URL

      http://www.tokushima-u.ac.jp/med/culture/jinruiiden/

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://plaza.umin.ac.jp/awahg/

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.tokushima-u.ac.jp/med/culture/jinruiiden/

    • Related Report
      2011 Annual Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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