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Development of the new detection method for 5-hydroxymethylcytidine in genomic DNA

Research Project

Project/Area Number 23651188
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Genome biology
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

HANAMI Takeshi  独立行政法人理化学研究所, LSA要素技術開発ユニット, 研究員 (60392073)

Co-Investigator(Kenkyū-buntansha) ITOH Masayoshi  独立行政法人理化学研究所, オミックス制御研究ユニット, ユニットリーダー (90344027)
Project Period (FY) 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2011: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Keywords5-ヒドロキシメチルシチジン / 化学変換 / 配列決定
Research Abstract

DNA oligomer containing 5-hmdC is react with protecting reagent with solvation to the aprotic solvent in the presence of long chain alkyl ammonium salt. The result showed that 5-hmdC is protected selectively by bridging 4'-amine and 5'-hydroxymethyl group. This protection group is stable under the condition of deamination reaction.

Report

(2 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )

URL: 

Published: 2011-08-05   Modified: 2019-07-29  

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