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Development of a multiplex degron system for the independent control of multiple proteins

Research Project

Project/Area Number 23651204
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field System genome science
Research InstitutionNational Institute of Genetics

Principal Investigator

KANEMAKI Masato  国立遺伝学研究所, 新分野創造センター, 准教授 (20444507)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2012: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2011: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordsタンパク質ネットワーク / タンパク質分解 / 植物ホルモン / 発現抑制 / 機能ゲノミクス / 細胞工学
Research Abstract

We have developed a novel protein depletion method, termed the auxin-inducible degron (AID) system, by transplanting a plant specific degradation pathway controlled by auxin. Because another plant hormone, Jasmonate-isoleucine (JA-ile), works in a similar way for degrading JAZ proteins in plants, we expected to make a new degron system in order to control two proteins independently by AID and JA-ile degrons. We tried to make a JA-ile degron system, but so far unfortunately, we have not succeeded yet. It seems to be necessary to revisit the working mechanism of JA-ile in plants and to optimize our assay conditions to test degradation of proteins using JA-ile. On the other hand, we have successfully improved the original AID system and applied for a patent

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (29 results)

All 2013 2012 2011 Other

All Journal Article (9 results) (of which Peer Reviewed: 9 results) Presentation (8 results) Book (4 results) Remarks (5 results) Patent(Industrial Property Rights) (3 results)

  • [Journal Article] Frontiers of Protein Expression Control with Conditional Degrons2013

    • Author(s)
      Kanemaki MT
    • Journal Title

      Pflugers Archive - European Journal of Physiology

      Volume: 465 Pages: 419-425

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The Elg1 Replication Factor C-like Complex Functions in PCNA Unloading during DNA Replication2013

    • Author(s)
      Kubota T, Nishimura K, Kanemaki MT, Donaldson AD.
    • Journal Title

      Molecular Cell

      Volume: 50 Issue: 2 Pages: 273-280

    • DOI

      10.1016/j.molcel.2013.02.012

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mcm8 and Mcm9 Form a Complex that Functions in Homologous Recombination Repair Induced by DNA Interstrand Crosslinks2012

    • Author(s)
      Nishimura K, Ishiai M, Horikawa K, Fukagawa T, Takata M, Takisawa H, Kanemaki MT
    • Journal Title

      Molecular Cell

      Volume: 47 Pages: 511-522

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mcm10 Plays a Role in Functioning of the Eukaryotic Replicative DNA Helicase, Cdc45-Mcm-GINS2012

    • Author(s)
      Watase G, Takisawa H, Kanemaki MT
    • Journal Title

      Current Biology

      Volume: 22 Pages: 343-349

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] The Inheritance of Histone Modifications Depends upon the Location in the Chromosome in Saccharomyces cerevisiae2011

    • Author(s)
      Masumoto H, Nakato R, Kanemaki M, Shirahige K, Hachinohe M
    • Journal Title

      PLoS One

      Volume: 6(12)

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Sld7, an Sld3-associated protein required for efficient chromosomal DNA replication in budding yeast.2011

    • Author(s)
      Tanaka T, Umemori T, Endo S, Muramatsu S, Kanemaki M, Kamimura Y, Obuse C, Araki H
    • Journal Title

      EMBO Journal

      Volume: 30 Pages: 2019-30

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Auxin-inducible protein depletion system in fission yeast2011

    • Author(s)
      Kanke M, Nishimura K, Kanemaki M, Kakimoto T, Takahashi TS, Nakagawa T, Masukata H
    • Journal Title

      BMC Cell Biology

      Volume: 12(1):8

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The Inheritance of Histone Modifications Depends upon the Location in the Chromosome in Saccharomyces cerevisiae2011

    • Author(s)
      Masumoto H, Nakato R, Kanemaki M, Shirahige K, Hachinohe M.
    • Journal Title

      PLoS One

      Volume: 6

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Sld7, an Sld3-associated protein required for efficient chromosomal DNA replication in budding yeast2011

    • Author(s)
      Tanaka T, Umemori T, Endo S, Muramatsu S, Kanemaki M, Kamimura Y, Obuse C, Araki H.
    • Journal Title

      EMBO Journal

      Volume: 30 Pages: 2019-2030

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] Mcm8 and Mcm9 form a novel complex that functions in HR repair induced by DNA interstrand crosslinks2012

    • Author(s)
      鐘巻 将人
    • Organizer
      染色体ワークショップ
    • Place of Presentation
      仙台
    • Year and Date
      2012-01-26
    • Related Report
      2012 Final Research Report
  • [Presentation] Mcm8 and Mcm9 form a complex that functions in homologous recombination repair induced by DNA interstrand crosslinks2012

    • Author(s)
      Kanemaki, M
    • Organizer
      The 8th 3R symposium
    • Place of Presentation
      Awaji island, Japan
    • Related Report
      2012 Final Research Report
  • [Presentation] Mcm8 and Mcm9 Form a Complex that Functions in Homologous Recombination Repair Induced by DNA Interstrand Crosslinks2012

    • Author(s)
      Nishimura K., Ishiai M., Fukagawa T., Takata M., Takisawa H. and Kanemaki M
    • Organizer
      24th Annual Fanconi Anemia Research Fund Scientific Symposium
    • Place of Presentation
      Denver, USA
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] Mcm8 and Mcm9 form a complex that functions in homologous recombination repair induced by DNA interstrand crosslinks2012

    • Author(s)
      Kanemaki, M.
    • Organizer
      The 8th 3R symposium
    • Place of Presentation
      Awaji Island, Japan
    • Related Report
      2012 Annual Research Report
  • [Presentation] MCM8 and MCM9 form a ovel complex involved in resistance to NA crosslinking regents2011

    • Author(s)
      Kanemaki M
    • Organizer
      DNA crosslinking regents Cold Spring Harbor Meeting on Eukaryotic DNA Replication & Genome Maintenance, Cold Spring Harbor
    • Place of Presentation
      USA
    • Year and Date
      2011-09-07
    • Related Report
      2012 Final Research Report
  • [Presentation] MCM8 and MCM9 form a novel complex involved in resistance to DNA crosslinking regents2011

    • Author(s)
      Kanemaki M.
    • Organizer
      Cold Spring Harbor Meeting on Eukaryotic DNA Replication & Genome Maintenance
    • Place of Presentation
      Cold Spring Harbor Laboratory, NY, USA
    • Related Report
      2011 Research-status Report
  • [Presentation] MCM8 and MCM9 form a novel complex involved in resistance to DNA crosslinking regents2011

    • Author(s)
      Nishimura K., Ishiai M., Fukagawa T., Takata M., Takisawa H., Kanemaki M.
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2011 Research-status Report
  • [Presentation] Mcm10 is required for origin unwinding in S. cerevisiae2011

    • Author(s)
      Watase G, Takisawa H, Kanemaki M.
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2011 Research-status Report
  • [Book] ケミカルバイオロジー 成功例から学ぶ研究戦略2013

    • Author(s)
      鐘巻将人
    • Publisher
      丸善出版
    • Related Report
      2012 Annual Research Report
  • [Book] ケミカルバイオロジー成功事例から学ぶ研究戦略2012

    • Author(s)
      鐘巻将人(翻訳)
    • Publisher
      丸善出版
    • Related Report
      2012 Final Research Report
  • [Book] Mcm8とMcm9は複合体を形成しDNA二本鎖間架橋の引き起こす相同組換え修復において機能する2012

    • Author(s)
      西村浩平, 鐘巻将人
    • Publisher
      First Author's
    • Related Report
      2012 Final Research Report
  • [Book] Mcm8とMcm9は複合体を形成しDNA二本鎖間架橋のひき起こす相同組換え修復において機能する2012

    • Author(s)
      西村浩平、鐘巻将人
    • Publisher
      First Author's
    • Related Report
      2012 Annual Research Report
  • [Remarks] ホームページ等 研究所内HP

    • URL

      http://www.nig.ac.jp/section/kanemaki/kanemaki-j.html

    • Related Report
      2012 Final Research Report
  • [Remarks] 研究室HP

    • Related Report
      2012 Final Research Report
  • [Remarks] DNA 二本鎖架橋修復の相同組換え反応に関与する新規複合体の発見

    • URL

      http://www.nig.ac.jp/Research-Highlights/992/1082.html

    • Related Report
      2012 Annual Research Report
  • [Remarks] 分子機能研究室HP

    • URL

      http://www.nig.ac.jp/labs/MolFunc/Molecular_Function_HP/Home.html

    • Related Report
      2012 Annual Research Report
  • [Remarks] 分子機能研究室・鐘巻研究室HP

    • URL

      http://www.nig.ac.jp/section/kanemaki/kanemaki-j.html

    • Related Report
      2012 Annual Research Report
  • [Patent(Industrial Property Rights)] タンパク質分解誘導性細胞、その製造方法、および、タンパク質分解の制御方法2013

    • Inventor(s)
      鐘巻将人、西村浩平、柿本辰男、滝澤温彦
    • Industrial Property Rights Holder
      大阪大学
    • Acquisition Date
      2013-04-26
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 改良型オーキシン分解誘導法を用いたタンパク質発現制御2011

    • Inventor(s)
      鐘巻将人、西村浩平、小畑有以、三村覚、滝澤温彦
    • Industrial Property Rights Holder
      大阪大学、国立遺伝学研究所
    • Filing Date
      2011-11-18
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 真核細胞におけるタンパク質分解誘導方法2011

    • Inventor(s)
      鐘巻将人、西村浩平、滝澤温彦、三村覚、小畑有以
    • Industrial Property Rights Holder
      国立遺伝学研究所、大阪大学
    • Industrial Property Number
      2011-511193
    • Filing Date
      2011
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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