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Deduction of relaxation mechanism for the anti-oxidative stress on the basis of the synchronized behavior of bacterial bioluminescence

Research Project

Project/Area Number 23654148
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Biophysics/Chemical physics
Research InstitutionKyoto Institute of Technology

Principal Investigator

KARATANI Hajime  京都工芸繊維大学, 工芸科学研究科, 教授 (10169659)

Co-Investigator(Renkei-kenkyūsha) TAJIMA Kunihiko  京都工芸繊維大学, 工芸科学研究科, 教授 (50163457)
KAWAKAMI Hajimu  龍谷大学, 理工学部・電子情報学科 (60298734)
Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2012: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2011: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords生物物理 / 生物発光 / 好気的代謝 / 酸化ストレス / 酸化的リン酸化 / 活性酸素種 / 可視化 / 酵母 / 発光細菌 / 非線形パターン / 離散フーリエ解析 / 遺伝子組換え
Research Abstract

By using luminous bacterium and bioluminescent Escherichia coli hovering the gene encoding bacterial luciferase, the oxidative stress induced dynamic bioluminescence (BL) pattern on the colony, as a model of the mass of mitochondria (MT), was analyzed. On the other hand, the visualization of reactive oxygen species (ROS) at the MT site in a eukaryotic cell and the oxidative stress has been carried out. In this case, a MT signal sequence fused gene encoding yellow fluorescent protein (Y1-Yellow), originating from a luminous bacterium, was cloned into a plasmid to transform yeast cells.
Analysis of the dynamic BL patterns showed that the oxidative stress response can be visualized as a collective behavior-like regulated bioluminescence. As a result of the transformation of yeast with the MT-Y1-Yellow coding gene, the ROS formation at the MT site was clearly visualized. It has also been shown that MT assembles to make the MT cluster in response to the strong oxidative stress.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (24 results)

All 2014 2013 2012 2011 Other

All Journal Article (7 results) (of which Peer Reviewed: 4 results) Presentation (17 results) (of which Invited: 1 results)

  • [Journal Article] Visualization of mitochondria in living cells with genetically encoded yellow fluorescent protein originating from a yellow-emitting luminous bacterium2013

    • Author(s)
      Hajime Karatani, Yuki Namikawa, Naomi Mori, Y.ukihiro Nishikawa, Saki Imai, Yutaka Ihara, Aya Kinoshita, Kengo Kitadokoro, Hiroshi Oyama
    • Journal Title

      Photochem. Photobiol. Sci.

      Volume: 12 Pages: 944-956

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Visualization of mitochondria in living cells with a genetically encoded yellow fluorescent protein originating from a yellow-emitting luminous bacterium.2013

    • Author(s)
      Karatani H, (他8 名、8 番目)
    • Journal Title

      Photochem Photobiol Sci.

      Volume: Epub ahead of print Issue: 5 Pages: 944-956

    • DOI

      10.1039/c3pp25360k

    • Related Report
      2013 Annual Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Vibrio azureus emit blue-shifted light caused by an accessory blue fluorescent protein2012

    • Author(s)
      Yoshizawa S, Karatani H ; Wada M, Kogure K
    • Journal Title

      FEMS Microbiology Letters

      Volume: 329 Issue: 1 Pages: 61-68

    • DOI

      10.1111/j.1574-6968.2012.02507.x

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of Protein-like Fluorophores Released from Lake Phytoplankton on the Basis of Fractionation and Electrophoresis2012

    • Author(s)
      E. Yamada, T. Hirota, N. Hatori, Yuki Kitao, Y. Fuse, S. Aoki, H. Karatani, T. Matsunaga
    • Journal Title

      Analytical Sciences

      Volume: 28 Issue: 6 Pages: 595-600

    • DOI

      10.2116/analsci.28.595

    • NAID

      10030758052

    • ISSN
      0910-6340, 1348-2246
    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] 刺激応答性微生物コロニー発光パターンの時空間画像処理2011

    • Author(s)
      服部謙作, 柄谷肇, 川上肇
    • Journal Title

      電子情報通信学会信学技報 (IEICE Technical Report)

      Volume: 111 Pages: 11-16

    • NAID

      10031109931

    • Related Report
      2013 Final Research Report
  • [Journal Article] 刺激応答性微生物コロニー発光パターンの時空間画像処理2011

    • Author(s)
      服部謙作、柄谷肇、川上肇
    • Journal Title

      信学技報(IEICE Technical Report)

      Volume: 111 Pages: 11-16

    • NAID

      10031109931

    • Related Report
      2011 Research-status Report
  • [Journal Article] Dynamic flash of light pattern on a luminous colony induced by oxygenation

    • Author(s)
      Hajime Karatani, Hajimu Kawakami, Yukihiro Nishikawa
    • Journal Title

      Journal of Luminescence

      Volume: (in press)

    • Related Report
      2013 Final Research Report
  • [Presentation] 形質転換生物発光大腸菌コロニーの発光パターンに及ぼす酸素化学種の効果2014

    • Author(s)
      柄谷肇, 川上肇
    • Organizer
      第94回日本化学会年会
    • Place of Presentation
      名古屋大学, 愛知県
    • Year and Date
      2014-03-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Bioluminescence and Chemiluminescence2014

    • Author(s)
      Hajime Karatani, Hajimu Kawakami, Yukihiro Nishikawa
    • Organizer
      The 18th International Symposium
    • Place of Presentation
      Uppsala, Sweden
    • Related Report
      2013 Final Research Report
  • [Presentation] 発光細菌由来レドックス蛍光タンパク質による活性酸素種の生細胞可視化2013

    • Author(s)
      柄谷肇, 山下朋也, 森奈穂美, 並川由紀, 伊原裕, 増田遥平, 尾山廣, 竹谷茂
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      横浜パシフィコ
    • Year and Date
      2013-09-12
    • Related Report
      2013 Final Research Report
  • [Presentation] Bacterial fluorescent proteins as probes for reactive oxygen species in living cells2013

    • Author(s)
      Hajime Karatani, Tomoya Yamashita, Naomi Mori, Yuki Namikawa, Saki Imai, Yukihiro Nishikawa, Hiroshi Oyama, Shigeru Tketani
    • Organizer
      15th Congress of the European Society for Photobiology (ESP2013)
    • Place of Presentation
      Liège Congress Centre, Liège, Belgium
    • Year and Date
      2013-09-06
    • Related Report
      2013 Final Research Report
  • [Presentation] 発光細菌由来青色蛍光タンパク質に基づく酸化ストレスの蛍光イメージング2012

    • Author(s)
      柄谷肇, 森奈穂美, 山下朋也, 並川由紀, 北所健悟, 竹谷茂
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      福岡国際会議場, 福岡県
    • Year and Date
      2012-12-15
    • Related Report
      2013 Final Research Report
  • [Presentation] Visualization of mitochondria in living cells using a redox yellow fluorescent protein with a mitochondrial targeting signal2012

    • Author(s)
      Hajime Karatani, Yuki Namikawa, Naomi Mori, Yutaka Ihara, Kengo Kitadokoro, Hiroshi Oyama
    • Organizer
      36th Meetings of the American Society for Photobiology (ASP2012)
    • Place of Presentation
      Delta Center-Ville, Montreal, Canada
    • Year and Date
      2012-06-25
    • Related Report
      2013 Final Research Report
  • [Presentation] Effect of oxygen stimulation on dynamic bioluminescence pattern on luminous colony2012

    • Author(s)
      Hajime Karatani, Hajimu Kawakami
    • Organizer
      36th Meetings of the American Society for Photobiology (ASP2012)
    • Place of Presentation
      Delta Center-Ville, Montreal, Canada
    • Year and Date
      2012-06-23
    • Related Report
      2013 Final Research Report
  • [Presentation] 発光細菌のコロニーに形成される動的な発光パターンの解析2012

    • Author(s)
      柄谷肇、川上肇、服部謙作
    • Organizer
      日本化学会第92春季年会(2012)
    • Place of Presentation
      慶応大学日吉キャンパス(神奈川県)
    • Related Report
      2011 Research-status Report
  • [Presentation] Effect of Oxygen Stimulation on Dynamic Bioluminescence Pattern on Luminous Colony2012

    • Author(s)
      Hajime Karatani, Hajimu Kawakami
    • Organizer
      36th Meeting of the American Society for Photobiology
    • Place of Presentation
      Delta Center-Ville, Montreal (Canada)
    • Related Report
      2011 Research-status Report
  • [Presentation] 刺激応答性微生物コロニー発光パターンの時空間画像処理2011

    • Author(s)
      服部謙作, 柄谷肇, 川上肇
    • Organizer
      ME とバイオサイバネティックス(MBE2011)
    • Place of Presentation
      名古屋工業大学, 愛知県
    • Year and Date
      2011-11-20
    • Related Report
      2013 Final Research Report
  • [Presentation] 刺激応答性微生物コロニー発光パターンの時空間画像処理2011

    • Author(s)
      服部謙作、柄谷肇、川上肇
    • Organizer
      電子情報通信学会、MEとバイオサイバネティックス
    • Place of Presentation
      名古屋工業大学(愛知県)
    • Related Report
      2011 Research-status Report
  • [Presentation] Bacterial fluorescent proteins as probes for reactive oxygen species in living cells

    • Author(s)
      Hajime Karatani, Yuki Namikawa, Naomi Mori, Tomoya Yamashita, Yukihiro Nishikawa, Hiroshi Oyama, Shigeru Taketani
    • Organizer
      15th Congress of the European Society for Photobiology
    • Place of Presentation
      Liege, Belgium
    • Related Report
      2013 Annual Research Report
  • [Presentation] 発光細菌由来青色蛍光タンパク質に基づく酸化ストレスの蛍光イメージング

    • Author(s)
      柄谷肇、森奈穂美、山下朋也、並川由紀、北所健悟、竹谷茂
    • Organizer
      第85日本生化学会大会
    • Place of Presentation
      福岡国際会議場、福岡県
    • Related Report
      2012 Research-status Report
  • [Presentation] 発光細菌由来蛍光プローブの開発及び生細胞ミトコンドリの可視化への応用

    • Author(s)
      柄谷肇
    • Organizer
      蛍光技術交流会「FluoroFest」
    • Place of Presentation
      堀場製作所、京都府
    • Related Report
      2012 Research-status Report
    • Invited
  • [Presentation] 発光細菌由来青色蛍光タンパク質をプローブとする酵母ミトコンドリア漏出物質の蛍光イメージング

    • Author(s)
      柄谷肇、森奈穂美、並川由紀、山下朋也、北所健悟
    • Organizer
      第61回日本分析化学会
    • Place of Presentation
      金沢大学、石川県
    • Related Report
      2012 Research-status Report
  • [Presentation] Effect of oxygen stimulation on dynamic bioluminescence pattern on luminous colony

    • Author(s)
      Hajime Karatani, Hajimu Kawakami
    • Organizer
      36th Meeting of the American Society for Photobiology
    • Place of Presentation
      Delta Center-Ville, Montreal, Canada
    • Related Report
      2012 Research-status Report
  • [Presentation] Visualization of mitochondria in living cells using a redox yellow fluorescent protein with a mitochondrial targeting signal

    • Author(s)
      Hajime Karatani, Yuki Namikawa, Naomi Mori, Yutaka Ihara, Kengo Kitadokoro, Hiroshi Oyama
    • Organizer
      36th Meeting of the American Society for Photobiology
    • Place of Presentation
      Delta Center-Ville, Montreal, Canada
    • Related Report
      2012 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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