Development of a comprehensive method for expression profiling of theplant genome with the use of histone code.
| Project/Area Number |
23657040
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| Research Category |
Grant-in-Aid for Challenging Exploratory Research
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| Allocation Type | Multi-year Fund |
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| Research Field |
Plant molecular biology/Plant physiology
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| Research Institution | Kyoto Prefectural University |
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Principal Investigator |
OBOKATA Junichi 京都府立大学, 大学院・生命環境科学研究科, 教授 (50185667)
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| Project Period (FY) |
2011 – 2012
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| Project Status |
Completed (Fiscal Year 2012)
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| Budget Amount *help |
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2011: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
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| Keywords | シロイヌナズナ / ChIP-seq 解析 / クロマチンリモデリング / ヒストンコード / H2A.Z / 遺伝子予測 / 発現プロファイリング / 植物ゲノム / 転写開始点 / ヌクレオソーム / 転写領域 / プロモーター |
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| Research Abstract |
In order to develop a comprehensive method for expression profiling of the plant genome with the use of histone code, we examined the genome-wide distribution profile of a histone variant H2A.Z in reference to the external stimuli and the position and strength of the transcription start sites (TSSs). Our results suggest that the plant H2A.Z could be a relatively stable marker for the transcribed regions of the plant genome.
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Report
(3 results)
Research Products
(17 results)
