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Mechanisms of maternal mRNA-specific knockdown in Ciona intestinalis

Research Project

Project/Area Number 23657140
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Developmental biology
Research InstitutionUniversity of Tsukuba

Principal Investigator

SASAKURA Yasunori  筑波大学, 生命環境系, 准教授 (10400649)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2013: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2012: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2011: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Keywords脊索動物 / ホヤ / 母性因子 / トランスポゾン / ノックダウン
Research Abstract

This research purposed the characterization of the targeted and specific knockdown method of maternal mRNAs in the ascidian Ciona intestinalis, and understanding the mechanisms of the localization of maternal mRNAs in Ciona with the knockdown method. We identified the DNA elements necessary for the knockdown. eGFP, Kaede, mKO2 and DsRed reporter genes can cause knockdown of target genes when expressed with the promoter and 5' UTR of target genes. Both Minos and Sleeping Beauty transposons can be used for the knockdown method. We found that 5'UTR is crucial for determining the target gene of knockout, and we showed that small antisense RNAs are produced from the 5'UTR in the knockdown lines. We knocked down a maternally expressed gene Ci-YB1 that encodes Y-box type RNA-binding protein. The animals in which maternal Ci-YB1 was knocked down showed abnormal development, suggesting that this gene is necessary for proper embryogenesis.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (6 results)

All 2014 2013 2011 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (3 results) Remarks (2 results)

  • [Journal Article] Transposon-mediated targeted and specific knockdown of maternally expressed transcripts in the ascidian Ciona intestinalis2014

    • Author(s)
      Iitsuka T., Mita K., Hozumi A., Hamada M., Satoh N., Sasakura Y
    • Journal Title

      Scientific Report

      Volume: (in press)

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Presentation] カタユウレイボヤ卵を用いた母性mRNA の新規発現抑制系の開発2013

    • Author(s)
      飯塚貴子, 佐藤瑛生, 三田薫, 保住暁子, 濱田麻友子, 佐藤矩行, 笹倉靖徳
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2013-12-04
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Sleeping Beautyトランスポゾンを用いた脊索動物カタユウレイボヤの形質転換2011

    • Author(s)
      笹倉 暁子
    • Organizer
      第34回 日本分子生物学会年会
    • Place of Presentation
      横浜・パシフィコ横浜
    • Related Report
      2011 Research-status Report
  • [Presentation] Germline transformation in the ascidian C. intestinalis

    • Author(s)
      笹倉 靖徳
    • Organizer
      2nd international symposium of the mechanisms of sexual reproduction in animals and plants
    • Place of Presentation
      名古屋ガーデンパレス
    • Related Report
      2012 Research-status Report
  • [Remarks]

    • URL

      http://www.shimoda.tsukuba.ac.jp/~sasakura/index.html

    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://www.tsukuba.ac.jp/attention-research/p201405231800.html

    • Related Report
      2013 Final Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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