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Analysis of non-coding RNA expression in stem and progenitor cells in mouse testes

Research Project

Project/Area Number 23659099
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field General anatomy (including Histology/Embryology)
Research InstitutionYokohama City University

Principal Investigator

OHBO Kazuyuki  横浜市立大学, 医学研究科, 教授 (70250751)

Co-Investigator(Renkei-kenkyūsha) MATSUMOTO Naomichi  横浜市立大学, 医学研究科, 教授 (80325638)
Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2012: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2011: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords幹細胞 / 精巣 / Non-coding RNA / 細胞分化 / ゲノム修飾 / 生殖細胞 / 前駆細胞 / 小分子RNA
Research Abstract

In mice, we found that the significant progression of heterochromatin formation occurred at the transition from stem to progenitor cells in adult male germ cells. In addition, the gene expression pattern was also significantly changed at the transition. Since it has been reported that non-coding RNA plays an important role in heterochromatin formation, resulting in changing of gene expression profiles, we analyzed and compared the expression profiles of miRNA and long non-coding RNA between stem cells and progenitor cells in adult male germ cells. We found several miRNA and long non-coding RNA that were specifically expressed in each of the cell populations.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (15 results)

All 2012 2011 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (11 results)

  • [Journal Article] Serum level of HE4 is closely associated with pulmonary adenocarcinoma progression2012

    • Author(s)
      SI. Yamashita, K. Tokuishi, T. Moroga, S. Yamamoto, K. Ohbo, S. Miyahara, Y. Yoshida, J. Yanagisawa, D. Hamatake, M. Hiratsuka, Y. Yoshinaga, T. Shiraishi, A. Iwasaki and K. Kawahara
    • Journal Title

      Tumour Biol

      Volume: 33 Issue: 6 Pages: 2365-2370

    • DOI

      10.1007/s13277-012-0499-8

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Splice variant HE4-V3 expression is associated with favorable prognosis in pulmonary adenocarcinoma2012

    • Author(s)
      K. Tokuishi, SI. Yamashita, K. Ohbo and K. Kawahara
    • Journal Title

      Tumour Biol

      Volume: 33 Issue: 1 Pages: 103-109

    • DOI

      10.1007/s13277-011-0252-8

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Serum level of HE4 is closely associated with pulmonary adenocarcinoma progression.2012

    • Author(s)
      Yamashita S, Tokuishi K, Moroga T, Yamamoto S, Ohbo K, Miyahara S, Yoshida Y, Yanagisawa J, Hamatake D, Hiratsuka M, Yoshinaga Y, Shiraishi T, Iwasaki A, Kawahara K.
    • Journal Title

      Tumour Biol

      Volume: 33 Pages: 2365-2370

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] HP1γ links histone methylation marks to meiotic synapsis in mice2011

    • Author(s)
      Takada Y, Naruse C, Costa Y, Shirakawa T, Tachibana M, Sharif J, Kezuka-Shiotani F, Kakiuchi D, Masmnoto H, Shinkai Y, Ohbo K, Peters AH, Turner JM, Asano M, Koseki H
    • Journal Title

      Development

      Volume: 138 Issue: 19 Pages: 4207-4217

    • DOI

      10.1242/dev.064444

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Presentation] Changing epigenetic modification and chromocenter formation associating with spermatogonia differentiation2012

    • Author(s)
      K. Ohbo, T.Shirakawa and H.Koseki
    • Organizer
      10th.EMBL Conference, Transcription and Chromatin
    • Place of Presentation
      EMBL, Heidelbeerg, Germany
    • Year and Date
      2012-08-26
    • Related Report
      2012 Final Research Report
  • [Presentation] Analysis of epigenetic changes associated with spermatogonia stem cell differentiation2012

    • Author(s)
      K.Ohbo
    • Organizer
      The 58th/60th NIBB Conference, Germline Specification, Sex, and Stem Cells
    • Place of Presentation
      岡崎カンファランスセンター(愛知県)
    • Year and Date
      2012-07-21
    • Related Report
      2012 Final Research Report
  • [Presentation] マウス精子形成過程における幹細胞と前駆細胞をゲノム修飾からとらえる2012

    • Author(s)
      大保和之、白川峰征、神里亮人、中島久仁子、古関明彦
    • Organizer
      第117回日本解剖学会総会・全国学術総会
    • Place of Presentation
      山梨大学甲府キャンパス(山梨県)
    • Year and Date
      2012-03-28
    • Related Report
      2012 Final Research Report
  • [Presentation] Analysis of epigenetic feature of spermatogonial stem cells in mice2012

    • Author(s)
      K. Ohbo, T. Shirakawa, R.Yaman-Deveci,Y.Kamizato, K.Nakajima, H.Sone, Y.Sato, S.Jafar, Y.Takada-Horisawa, S.Yoshida, K.Ura, M.Muto and H.Koseki
    • Organizer
      Keystone Symposia, Epigenomics, Chromatin Dynamics
    • Place of Presentation
      Keystone resort, Keystone, USA.
    • Year and Date
      2012-01-19
    • Related Report
      2012 Final Research Report
  • [Presentation] Analysis of epigenetic changes associated with spermatogonia stem cell differentiation.2012

    • Author(s)
      Ohbo K.
    • Organizer
      The 58th/60th NIBB Conference, Germline Specification, Sex, and Stem Cells.
    • Place of Presentation
      岡崎コンファレンスセンター(愛知県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Changing epigenetic modification and chromocenter formation associating with spermatogonia differentiation2012

    • Author(s)
      Ohbo K, Shirakawa T. Koseki H
    • Organizer
      10th.EMBL Conference, Transcription and Chromatin
    • Place of Presentation
      ハイデルベルグ、ドイツ
    • Related Report
      2012 Annual Research Report
  • [Presentation] Analysis of epigenetic features of spermatogonial stem cells.2012

    • Author(s)
      Ohbo K. Shirakawa T. Yaman Devece R. et al.
    • Organizer
      Keystone symposia, Epigenomics
    • Place of Presentation
      Keystone, USA
    • Related Report
      2011 Research-status Report
  • [Presentation] Identification of an epigenetic checkpoint that controls the differentiation from spermatogonial stem cells to progenitor cells2011

    • Author(s)
      T. Shirakawa,R.Yaman-Deveci,Y.Kamizato, K.Nakajima, H.Sone, Y.Sato, S.Jafar, Y.Takada-Horisawa, S.Yoshida, K.Ura, M.Muto, H.Koseki, T.Suda and K.Ohbo
    • Organizer
      Stem Cells in Development and Disease
    • Place of Presentation
      Max-Delbrueck-Center,Berlin,Germany
    • Year and Date
      2011-09-12
    • Related Report
      2012 Final Research Report
  • [Presentation] An epigenetic checkpoint controls the transition from a stem cell pool to a progenitor cell stage in testes2011

    • Author(s)
      K.Ohbo
    • Organizer
      EMBO Conference Series on Chromatin and Epigenetics
    • Place of Presentation
      EMBL, Heidelberg, Germany
    • Year and Date
      2011-06-03
    • Related Report
      2012 Final Research Report
  • [Presentation] Identification of an epigenetic checkpoint that controls the differentiation from spermatogonial stem cells to progenitor cells.2011

    • Author(s)
      Shirakawa T. Ohbo K.
    • Organizer
      Stem cells in Development and Disease
    • Place of Presentation
      Berlin, Germany
    • Related Report
      2011 Research-status Report
  • [Presentation] マウス精子形成過程における幹細胞と前駆細胞をゲノム修飾からとらえる

    • Author(s)
      大保和之、白川峰征、神里亮人 他
    • Organizer
      第117回日本解剖学会総会・全国学術集会
    • Place of Presentation
      山梨大学甲府キャンパス(山梨県)
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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