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Study of novel HIV restriction factors

Research Project

Project/Area Number 23659229
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Virology
Research InstitutionKyoto University

Principal Investigator

KOYANAGI Yoshio  京都大学, ウイルス研究所, 教授 (80215417)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2012: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2011: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
KeywordsAIDS / HIV / restriction factor / SAMHD1 / Vpx / マクロファージ / HSV / nucleotidase / 単球
Research Abstract

Accumulating evidences have suggested that the host cells possess intrinsic anti-viral factors. SAMHD1 is a newly identified anti-HIV host factor that has a dNTP triphosphohydrolase activity and depletes intracellular dNTP pools in non-dividing myeloid cells. Since DNA viruses utilize cellular dNTPs, we investigated whether SAMHD1 limits the replication of DNA viruses in non-dividing myeloid target cells. Indeed, a double stranded DNA viruses, herpes simplex virus type 1, are subject to SAMHD1 restriction in non-dividing target cells in a dNTP dependent manner. This study suggests that SAMHD1 is a potential innate anti-viral player that suppresses the replication of a wide range of DNA viruses as well as retroviruses that infect non-dividing myeloid cells during infection.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (27 results)

All 2013 2012 2011 Other

All Journal Article (12 results) (of which Peer Reviewed: 12 results) Presentation (12 results) (of which Invited: 2 results) Remarks (3 results)

  • [Journal Article] Quantification of the dynamics of enterovirus 71 infection by experimental-mathematical investigation2013

    • Author(s)
      Fukuhara M, Iwami S, Sato K, Nishimura Y, Shimizu H, Aihara K, Koyanagi Y
    • Journal Title

      J Virol

      Volume: 87 Issue: 1 Pages: 701-705

    • DOI

      10.1128/jvi.01453-12

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Vpu and BST2: still not there yet?2012

    • Author(s)
      Sato K., Gee P., Koyanagi Y.
    • Journal Title

      Frontiers in Microbiology

      Volume: 3 Pages: 131-131

    • DOI

      10.3389/fmicb.2012.00131

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identifying viral parameters from in vitro cell cultures.2012

    • Author(s)
      Iwami, S.
    • Journal Title

      Front. Microbiol.

      Volume: 3 Pages: 319-319

    • DOI

      10.3389/fmicb.2012.00319

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Vpu augments the initial burst phase of HIV-1 propagation and downre gulates BST2 and CD4 in humanized mice2012

    • Author(s)
      Sato, K.
    • Journal Title

      J Virol.

      Volume: 86 Issue: 9 Pages: 5000-5013

    • DOI

      10.1128/jvi.07062-11

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Integrase-independent HIV-1 infection is augmented under conditions of DNA damage and produces a viral reservoir2012

    • Author(s)
      Ebina H, Kanemura Y, Suzuki Y, Urata K, Misawa N, Koyanagi Y
    • Journal Title

      Virology

      Volume: 427 Issue: 1 Pages: 44-50

    • DOI

      10.1016/j.virol.2012.02.004

    • NAID

      120004007474

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Rho GTPase inhibitorARHGDIB/D4GDI limits HIV-1 replication2011

    • Author(s)
      Watanabe T, Urano E, Koyanagi Y, KomanoJ, 10人中9番目
    • Journal Title

      AIDS Research and Human Retroviruses

      Volume: (印刷中) Issue: 8 Pages: 1-10

    • DOI

      10.1089/aid.2011.0180

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] APOBEC1-mediated editing and attenuation of herpes simplex virus 1 DNA indicate that neurons have an antiviral role during herpes simplex encephalitis2011

    • Author(s)
      Gee P, Ando Y, Kitayama H, Yamamoto SP, Kanemura Y, Ebina H, Kawaguchi Y, Koyanagi Y
    • Journal Title

      Journal of Virology

      Volume: 85 Issue: 19 Pages: 9726-9736

    • DOI

      10.1128/jvi.05288-11

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] A novel animal model of Epstein-Barr virus-associated hemophagocytic lymphohistiocytosis in humanized mice2011

    • Author(s)
      Sato K, Misawa N, Nie C, Satou Y, Iwakiri D, Matsuoka M, Takahashi R, Kuzushima K, Ito M, Takada K, Koyanagi Y
    • Journal Title

      Blood

      Volume: 117 Issue: 21 Pages: 5663-5673

    • DOI

      10.1182/blood-2010-09-305979

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The mouse is out of the bag : insights and perspectives on HIV-1-infected humanized mouse models (review)2011

    • Author(s)
      Sato K, Koyanagi Y
    • Journal Title

      Experimental Biology and Medicine

      Volume: 236 Issue: 8 Pages: 977-985

    • DOI

      10.1258/ebm.2011.010294

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Huwe1, a novel cellular interactor of Gag-Pol through integrase binding, negatively influences HIV-1 infectivity2011

    • Author(s)
      Yamamoto SP, Okawa K, Nakano T, Sano K, Ogawa K, Masuda T, Morikawa Y, Koyanagi Y, Suzuki Y
    • Journal Title

      Mcirobes Infect

      Volume: 13 Issue: 4 Pages: 339-349

    • DOI

      10.1016/j.micinf.2010.12.002

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] APOBEC1-mediated editing and attenuation of herpes simplex virus 1 DNA indicate that neurons have an antiviral role during herpes simplex encephalitis2011

    • Author(s)
      Gee P, Ando Y, Kitayama H, Yamamoto SP, Kanemura Y, Ebina H, Kawaguchi Y, Koyanagi Y
    • Journal Title

      Journal of Virology

      Volume: 85 Pages: 9726-9736

    • NAID

      120003497115

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Host factor SAMHD1 restricts DNA viruses in non-dividing myeloid cells

    • Author(s)
      Hollenbaugh JA, Gee P, Baker J, Daly MB, Amie S, Kasai N, Kanemura Y, Ward BM, Koyanagi Y, Kim B
    • Journal Title

      PLoS Pathog

      Volume: (印刷中)

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Presentation] レトロウイルス感染におけるエフェクター分子北海道大学遺伝子制御研究所研究集会2012

    • Author(s)
      小柳義夫
    • Organizer
      感染と癌 -感染癌のエフェクター分子とその標的
    • Place of Presentation
      北海道大学医学部学友会館(札幌)
    • Year and Date
      2012-09-18
    • Related Report
      2012 Final Research Report
  • [Presentation] Positive contribution of HIV-1 Vpu for viral propagation in vivo2012

    • Author(s)
      Sato K, Misawa N, Satou Y, Matsuoka M, Ito M, Koyanagi Y
    • Organizer
      37th Retroviruses Meeting
    • Place of Presentation
      Cold Spring Harbor (米国)
    • Year and Date
      2012-05-22
    • Related Report
      2012 Final Research Report
  • [Presentation] DNA damage induces illegitimate integration of HIV-1 in the presence of integrase inhibitor, leading to produce a viral reservoir2012

    • Author(s)
      Ebina H, Kanemura Y, Suzuki Y, Urata K, Misawa N, Koyanagi Y
    • Organizer
      37th Retroviruses Meeting Cold Spring Harbor, poster, New York
    • Place of Presentation
      Cold Spring Harbor (米国)
    • Year and Date
      2012-05-22
    • Related Report
      2012 Final Research Report
  • [Presentation] Overview of infection model of humanized mice2012

    • Author(s)
      小柳義夫
    • Organizer
      1st Samsung Humanized Mice Symposium(招待講演)
    • Place of Presentation
      ソウル(韓国)
    • Year and Date
      2012-04-13
    • Related Report
      2012 Final Research Report
  • [Presentation] Biochemical characterization of the HIV- 1 restriction factor SAMHD12012

    • Author(s)
      Gee P, Okamoto S, Kanemura Y, Ebina H,Koyanagi Y
    • Organizer
      第19回 Conference on Retroviruses and Opportunistic Infections
    • Place of Presentation
      シアトル(米国)
    • Year and Date
      2012-03-06
    • Related Report
      2012 Final Research Report
  • [Presentation] Induction of immune activation by the depletion of regulatory CD4+ T cell during acute HIV-1 infection in humanized mouse model2012

    • Author(s)
      Sato K, Misawa N, Satou ., Matsuoka M, Ito M, Koyanagi Y
    • Organizer
      19th Conference on Retroviruses and Opportunistic Infections
    • Place of Presentation
      シアトル(米国)
    • Year and Date
      2012-03-05
    • Related Report
      2012 Final Research Report
  • [Presentation] Overview of infection model of humanized mice2012

    • Author(s)
      Koyanagi Y.
    • Organizer
      1st Samsung Humanized Mice Symposium
    • Place of Presentation
      Seoul (Korea)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] DNA damage induces illegitimate integration of HIV-1 in the presence of integrase inhibitor, leading to produce a viral reservoir2012

    • Author(s)
      Ebina H., Kanemura Y., Suzuki Y., Urata K., Misawa N., Koyanagi Y.
    • Organizer
      37th Retroviruses Meeting
    • Place of Presentation
      Cold Spring Harbor (米国New York)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Positive contribution of HIV-1 Vpu for viral propagation in vivo2012

    • Author(s)
      Sato K., Misawa N., Satou Y., Matsuoka M., Ito M., Koyanagi Y.
    • Organizer
      37th Retroviruses Meeting
    • Place of Presentation
      Cold Spring Harbor (米国New York)
    • Related Report
      2012 Annual Research Report
  • [Presentation] レトロウイルス感染におけるエフェクター分子2012

    • Author(s)
      小柳義夫
    • Organizer
      北海道大学遺伝子制御研究所研究集会「感染と癌 -感染癌のエフェクター分子とその標的-」
    • Place of Presentation
      北海道大学医学部学友会館(札幌)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Biochemical characterization of the HIV-1 restriction factor SAMHD12012

    • Author(s)
      Gee P, Okamoto S, Kanemura Y, Ebina H, Koyanagi Y
    • Organizer
      第19回Conference on Retroviruses and Opportunistic infections
    • Place of Presentation
      シアトル(米国)
    • Related Report
      2011 Research-status Report
  • [Presentation]2011

    • Author(s)
      Gee P, Kanemura Y, Ebina H, Koyanagi Y
    • Organizer
      第12回熊本エイズセミナー
    • Place of Presentation
      阿蘇リゾート グランヴィリオ ホテル(阿蘇市)
    • Year and Date
      2011-10-20
    • Related Report
      2012 Final Research Report 2011 Research-status Report
  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/Lab/KoyanagiHP/saito/TOP.html

    • Related Report
      2012 Final Research Report
  • [Remarks] ウイルス研究所 年報 Volume 54 2011

    • URL

      http://www.virus.kyoto-u.ac.jp/about/data2011/AR2011_full.pdf

    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/Lab/KoyanagiHP/rekucha/2011_Annual_report.html

    • Related Report
      2011 Research-status Report

URL: 

Published: 2011-08-05   Modified: 2019-07-29  

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