Establishment of a strategy for the detection of disease-related modification of proteins in serum
Project/Area Number |
23659305
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Research Category |
Grant-in-Aid for Challenging Exploratory Research
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Allocation Type | Multi-year Fund |
Research Field |
Laboratory medicine
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Research Institution | Kitasato University |
Principal Investigator |
KODERA Yoshio 北里大学, 理学部物理学科, 准教授 (60265733)
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Co-Investigator(Renkei-kenkyūsha) |
MAEDA Tadakazu 北里大学, 名誉教授 (90265728)
NOMURA Fumio 千葉大学, 医学研究院, 教授 (80164739)
GOJIMA Naoki (独)産業技術総合研究所生物情報解析研究センター, 主任研究員 (70215482)
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Project Period (FY) |
2011 – 2012
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Project Status |
Completed (Fiscal Year 2012)
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Budget Amount *help |
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2012: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2011: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
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Keywords | 臨床検査医学 / 血中診断マーカー / タンパク質 / 機能状態 / 血清 / 定量分析 / 翻訳語修飾 / 診断マーカー |
Research Abstract |
Modifications of protein such as post-translational modification, cleavage and alternative splicing are caused by disease. In this study, we have developed the strategy to detect disease-related protein modification in serum.
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Report
(3 results)
Research Products
(61 results)
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[Journal Article] Establishment and application of a high-quality comparative analysis strategy for the discovery and small-scale validation of low-abundance biomarker peptides in serum based on an optimized novel peptide extraction method2013
Author(s)
Saito T, Kawashima Y, Minamida S, Matsumoto K, Araki K, Matsui T, Satoh M, Nomura F, Iwamura M, Maeda T, Baba S, Kodera Y
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Journal Title
Journal of Electrophoresis
Volume: 57
Issue: 1
Pages: 1-9
DOI
NAID
ISSN
1349-9394, 1349-9408
Related Report
Peer Reviewed
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[Journal Article] Application of quantitative proteomic analysis using tandem mass tags for discovery and identification of novel biomarkers in periodontal disease2013
Author(s)
Tsuchida S, Satoh M, Kawashima Y, Sogawa K, Kado S, Sawai S, Nishimura M, Ogita M, Takeuchi Y, Kobyashi H, Aoki A, Kodera Y,Matsushita K, Izumi Y, Nomura F
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Journal Title
Related Report
Peer Reviewed
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[Journal Article] Oryziaslatipes, as a model for human obesity-related glomerulopathy2013
Author(s)
Ichimura K, Kawashima Y, Nakamura T, Powell R, Hidoh Y, Terai S, Sakaida I,Kodera Y, Tsuji T, Ma JX, Sakai T, Matsumoto H, Obara T. Medaka
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Journal Title
Biochem Biophys Res Commun
Volume: 431(4)
Pages: 712-7
Related Report
Peer Reviewed
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[Journal Article] Integrated view of the humanchromosome X-centric proteome project2013
Author(s)
Yamamoto T, Nakayama K, Hirano H, Tomonaga T, Ishihama Y, Yamada T, Kondo T,Kodera Y, Sato Y, Araki N, Mamitsuka H, Goshima N
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Journal Title
J Proteome Res
Volume: 12(1)
Pages: 58-61
Related Report
Peer Reviewed
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[Journal Article] Angiotensin-converting enzymeinhibition curbs tyrosine nitration of mitochondrial proteins in the renal cortexduring the early stage of diabetes mellitus in rats2013
Author(s)
Ishii N, Carmines PK, Yokoba M, Imaizumi H, Ichikawa T, Ikenagasa H, Kodera Y,Oh-Ishi M, Aoki Y, Maeda T, Takenaka T, Katagiri M
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Journal Title
Clin Sci (Lond)
Volume: 124(8)
Pages: 543-52
Related Report
Peer Reviewed
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[Journal Article] Medaka fish, Oryzias latipes, as a model for human obesity-related glomerulopathy.2013
Author(s)
Ichimura K, Kawashima Y, Nakamura T, Powell R, Hidoh Y, Terai S, Sakaida I, Kodera Y, Tsuji T, Ma JX, Sakai T, Matsumoto H, Obara T.
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Journal Title
Biochem Biophys Res Commun.
Volume: 431
Pages: 712-717
Related Report
Peer Reviewed
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[Journal Article] Integrated view of the human chromosome X-centric proteome project.2013
Author(s)
Yamamoto T, Nakayama K, Hirano H, Tomonaga T, Ishihama Y, Yamada T, Kondo T,Kodera Y, Sato Y, Araki N, Mamitsuka H, Goshima N.
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Journal Title
J Proteome Res.
Volume: 12
Issue: 1
Pages: 58-61
DOI
Related Report
Peer Reviewed
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[Journal Article] Angiotensin-converting enzyme inhibition curbs tyrosine nitration of mitochondrial proteins in the renal cortex during the early stage of diabetes mellitus in rats.2013
Author(s)
Ishii N, Carmines PK, Yokoba M, Imaizumi H, Ichikawa T, Ikenagasa H, Kodera Y,Oh-Ishi M, Aoki Y, Maeda T, Takenaka T, Katagiri M.
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Journal Title
Clin Sci (Lond).
Volume: 124
Issue: 8
Pages: 543-552
DOI
Related Report
Peer Reviewed
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[Journal Article] A strategy for large-scale phosphoproteomics and SRM-based validation of human breast cancer tissue samples2012
Author(s)
Narumi R, Murakami T, Kuga T, Adachi J, Shiromizu T, Muraoka S, Kume H, Kodera Y, Matsumoto M, Nakayama K, Miyamoto Y, Ishitobi M, Inaji H, Kato K, Tomonaga T
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Journal Title
J Proteome Res
Volume: 11(11)
Pages: 5311-22
Related Report
Peer Reviewed
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[Journal Article] Strategy for SRM-basedverification of biomarker candidates discovered by iTRAQ method in limited breast cancer tissue samples2012
Author(s)
Muraoka S, Kume H, Watanabe S, Adachi J, Kuwano M, Sato M, Kawasaki N, Kodera Y,Ishitobi M, Inaji H, Miyamoto Y, Kato K, Tomonaga T
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Journal Title
J Proteome Res
Volume: 11(8)
Pages: 4201-10
Related Report
Peer Reviewed
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[Journal Article] Proteomic analysis of gingivalcrevicular fluid for discovery of novel periodontal disease markers2012
Author(s)
Tsuchida S, Satoh M, Umemura H, Sogawa K, Kawashima Y, Kado S, Sawai S,Nishimura M, Kodera Y, Matsushita K, Nomura F
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Journal Title
Proteomics
Volume: 12(13)
Pages: 2190-202
Related Report
Peer Reviewed
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[Journal Article] A strategy for large-scale phosphoproteomics and SRM-based validation of human breast cancer tissue samples.2012
Author(s)
Narumi R, Murakami T, Kuga T, Adachi J, Shiromizu T, Muraoka S, Kume H, Kodera Y, Matsumoto M, Nakayama K, Miyamoto Y, Ishitobi M, Inaji H, Kato K, Tomonaga T.
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Journal Title
J Proteome Res.
Volume: 11
Issue: 11
Pages: 5311-5322
DOI
Related Report
Peer Reviewed
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[Journal Article] Strategy for SRM-based verification of biomarker candidates discovered by iTRAQ method in limited breast cancer tissue samples.2012
Author(s)
Muraoka S, Kume H, Watanabe S, Adachi J, Kuwano M, Sato M, Kawasaki N, Kodera Y, Ishitobi M, Inaji H, Miyamoto Y, Kato K, Tomonaga T.
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Journal Title
J Proteome Res.
Volume: 11
Issue: 8
Pages: 4201-4210
DOI
Related Report
Peer Reviewed
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[Journal Article] Identification of a high molecular weight kininogen fragment as a marker for early gastric cancer by serum proteome analysis.2011
Author(s)
Umemura H, Togawa A, Sogawa K, Satoh M, Mogushi K, Nishimura M, Matsushita K, Tanaka H, Takizawa H, Kodera Y, Nomura F.
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Journal Title
J Gastroenterol.
Volume: 46
Pages: 577-585
NAID
Related Report
Peer Reviewed
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[Presentation] High quality method for discovery and verification of low abundance biomarker peptides in serum2012
Author(s)
"Yoshio Kodera Tatsuya Saito, Yusuke Kawashima, Satoru Minamida, Kazumasa Matsumoto, Keita Araki, Takashi Matsui, Mamoru Satoh, Fumio Nomura,Masatsugu Iwamura, Shiro Baba ,Tadakazu Maeda
Organizer
AOHUPO(Asia Oceania HUman Proteomics Organization)
Place of Presentation
北京/中国
Related Report
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[Presentation] Comprehensive approach to develop diagnostic biomarker peptides in serum –Establishment of discovery and validation methods targeting low-abundance peptides–2012
Author(s)
Yoshio Kodera,Tatsuya Saitoh,Yusuke Kawashima, Kazuyuki Sogawa, Satoru Minamida, Kazumasa Matsumoto, Masatsugu Iwamura, Shiro Baba,Tadakazu Maeda,Takeshi Tomonaga,Fumio Nomura
Organizer
HUPO 2012 11th World Congress
Place of Presentation
ボストン(USA)
Related Report
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