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Transcriptome Analysis of Schizophrenia

Research Project

Project/Area Number 23659563
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Psychiatric science
Research InstitutionNagoya University

Principal Investigator

OZAKI Norio  名古屋大学, 医学系研究科, 教授 (40281480)

Co-Investigator(Renkei-kenkyūsha) OHNO Kinji  名古屋大学, 大学院・医学系研究科, 教授 (80397455)
Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2012: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2011: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywordsトランスクリプトーム解析 / 統合失調症 / 分子精神医学 / ゲノム医学 / バイオインフォマティックス / バイオインフォマティックス
Research Abstract

Transcriptome analysis of lymphoblastoid cell line derived fromschizophrenic patients and healthy controls was performed to investigate dysregulationof alternative splicing by comparing the profiles observed. We found the subtle differences in gene and exon level analysis between schizophrenic patients and healthy controls. The top hit genes were tested using pathway and hierarchical clustering analysis. In addition we observed a number of regulatory SNPs (expression quantitative trait loci-eQTL) by integrating data from genotype and expression wise analysis. As a result, the genes which expression was affected by the disease status may be associated with molecular mechanisms that contribute to the pathophysiology of schizophrenia.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (17 results)

All 2013 2012 2011

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (9 results)

  • [Journal Article] DPP6 as a candidate gene for neuroleptic-induced tardive dyskinesia2013

    • Author(s)
      Tanaka S, Syu A, Ishiguro H, Inada T, Horiuchi Y, Ishikawa M, Koga M, Noguchi E, Ozaki N, Someya T, Kakita A, Takahashi H, Nawa H,Arinami T
    • Journal Title

      Pharmacogenomics J

      Volume: 13(1) Issue: 1 Pages: 27-34

    • DOI

      10.1038/tpj.2011.36

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Resequencing and Association Analysis of the KALRN and EPHB1 Genes And Their Contribution to Schizophrenia Susceptibility2012

    • Author(s)
      Kushima I, Nakamura Y, Aleksic B, Ikeda M, Ito Y, Shiino T, Okochi T, Fukuo Y, Ujike H, Suzuki M, Inada T, Hashimoto R, Takeda M, Kaibuchi K, Iwata N, Ozaki N
    • Journal Title

      Schizophr Bull

      Volume: 38(3) Issue: 3 Pages: 552-560

    • DOI

      10.1093/schbul/sbq118

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Effects of aging on the morphologies of Heschl's gyrus and the superior temporal gyrus in schizophrenia: A postmortem study2012

    • Author(s)
      Torii Y, Iritani S, Sekiguchi H, Habuchi C, Hagikura M, Arai T, Ikeda K, Akiyama H, Ozaki N
    • Journal Title

      Schizophr Res

      Volume: 134(2-3) Issue: 2-3 Pages: 137-142

    • DOI

      10.1016/j.schres.2011.10.024

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Association of SNPs linked to increased expression of SLC1A1 with schizophrenia2012

    • Author(s)
      Horiuchi Y, Iida S, Koga M, Ishiguro H, Iijima Y, Inada T, Watanabe Y, Someya T, Ujike H, Iwata N, Ozaki N, Kunugi H, Tochigi M, Itokawa M, Arai M, Niizato K, Iritani S, Kakita A, Takahashi H, Nawa H, Arinami T
    • Journal Title

      Am J Med Genet B Neuropsychiatr Genet

      Volume: 159 B Issue: 1 Pages: 30

    • DOI

      10.1002/ajmg.b.31249

    • URL

      https://pure.teikyo.jp/en/publications/0fa6173e-8aca-454e-be68-1fb6ca2ab9da

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genome-wide association study of schizophrenia in a Japanese population2011

    • Author(s)
      Ikeda M, Aleksic B, その他20名, Ozaki N,O'Donovan MC, Iwata N
    • Journal Title

      Biol Psychiatry

      Volume: 69 (5) Issue: 5 Pages: 472-478

    • DOI

      10.1016/j.biopsych.2010.07.010

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Vulnerability in early life to changes in the rearing environment plays a crucial role in the aetiopathology of psychiatric disorders2011

    • Author(s)
      Niwa M, Matsumoto Y, Mouri A, Ozaki N, Nabeshima T
    • Journal Title

      Int J Neuropsychopharmacol.

      Volume: 14(4) Issue: 04 Pages: 459-77

    • DOI

      10.1017/s1461145710001239

    • NAID

      10030656981

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Impairment of the tyrosine hydroxylase neuronal network in the orbitofrontal cortex of a genetically2011

    • Author(s)
      Sekiguchi H, Iritani S, Habuchi C, Torii Y,Kuroda K, Kaibuchi K, Ozaki N
    • Journal Title

      modified mouse model of schizophrenia

      Volume: 1392 Pages: 47-53

    • DOI

      10.1016/j.brainres.2011.03.058

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Loss of Function Studies in Mice and Genetic Association Link Receptor Protein Tyrosine2011

    • Author(s)
      Takahashi N, Nielsen KS, Aleksic B, Petersen S,Ikeda M, Kushima I, Vacaresse N, Ujike H, IwataN, Dubreuil V, Mirza N, Sakurai T, Ozaki N,Buxbaum JD, Sap J
    • Journal Title

      Phosphatase alpha to Schizophrenia

      Volume: 70 (7) Issue: 7 Pages: 626-635

    • DOI

      10.1016/j.biopsych.2011.06.016

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Presentation] Myelin-related abnormality of schizophrenia: genetic, imaging and postmortem study2012

    • Author(s)
      Ozaki N
    • Organizer
      the 15th Pacific Rim College of Psychiatrists Scientific Meeting (PRCP 2012) Symposium Genetics of Schizophrenia
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2012-10-25
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] White matter abnormalities in schizophrenia: genetic, imaging and postmortem study2012

    • Author(s)
      尾崎紀夫
    • Organizer
      Neuro2012
    • Place of Presentation
      名古屋
    • Year and Date
      2012-09-20
    • Related Report
      2012 Final Research Report
  • [Presentation] Schizophrenia associated polymorphism regulates PTPRA transcript expression in lymphoblastoid cell lines2012

    • Author(s)
      Akira Yoshimi, Nagahide Takahashi, Branko Aleksic, Itaru Kushima, Masashi Ikeda, Hiroshi Ujike, Takeshi Sakurai, Joseph D. Buxbaum, Jan Sap, Nakao Iwata, Norio Ozaki
    • Organizer
      WCPG 2012
    • Place of Presentation
      Hamburg, Germany
    • Related Report
      2012 Final Research Report
  • [Presentation] Schizophrenia associated polymorphism regulates PTPRA transcript expression in lymphoblastoid cell lines2012

    • Author(s)
      Akira Yoshimi, Nagahide Takahashi, Branko Aleksic, Itaru Kushima, Masashi Ikeda, Hiroshi Ujike, Takeshi Sakurai, Joseph D. Buxbaum, Jan Sap, Nakao Iwata, Norio Ozaki
    • Organizer
      the 11th World Congress of Psychiatric Genetics (WCPG 2012)
    • Place of Presentation
      Hamburg, Germany
    • Related Report
      2012 Annual Research Report
  • [Presentation] White matter abnormalities in schizophrenia: genetic, imaging and postmortem study2012

    • Author(s)
      尾崎紀夫
    • Organizer
      第35回日本神経科学大会 Neuroscience2012
    • Place of Presentation
      名古屋国際会議場(名古屋)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Protein tyrosine phosphatase alufa as novel candidate molecule for the etiopathology of schizophrenia: Genetic analysis and biological implications2011

    • Author(s)
      尾崎紀夫
    • Organizer
      第34回日本神経科学大会
    • Place of Presentation
      横浜
    • Year and Date
      2011-09-16
    • Related Report
      2012 Final Research Report
  • [Presentation] Genome study of Japanese schizophrenia: GWAS, CNV and Rare variants: Symposium: Neuroscience and neurochemistry in Japan2011

    • Author(s)
      Ozaki N
    • Organizer
      WFSBP Congress 2011
    • Place of Presentation
      Prague, Czech Republic
    • Year and Date
      2011-05-31
    • Related Report
      2012 Final Research Report
  • [Presentation] Genome study of Japanese schizophrenia: GWAS, CNV and Rare variants: Symposium: Neuroscience and neurochemistry in Japan2011

    • Author(s)
      Ozaki N
    • Organizer
      WFSBP Congress 2011
    • Place of Presentation
      Prague
    • Related Report
      2011 Research-status Report
  • [Presentation] Protein tyrosine phosphatase alufa as novel candidate molecule for the etiopathology of schizophrenia: Genetic analysis and biological implications.2011

    • Author(s)
      尾崎紀夫
    • Organizer
      第34回日本神経科学大会
    • Place of Presentation
      横浜
    • Related Report
      2011 Research-status Report

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Published: 2011-08-05   Modified: 2019-07-29  

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