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Proteomic analysis of lung epithelial lining fluids collected from the patients suffering from acute lung injury.

Research Project

Project/Area Number 23659748
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Anesthesiology/Resuscitation studies
Research InstitutionKyoto Prefectural University of Medicine

Principal Investigator

SAWA Teiji  京都府立医科大学, 医学(系)研究科(研究院), 教授 (10206013)

Co-Investigator(Kenkyū-buntansha) IKEGAWA Masaya  同志社大学, 生命科学, 教授 (60381943)
HASHIMOTO Satoru  京都府立医科大学, 医学研究科, 病院教授 (90167578)
MATSUYAMA Hiroki  京都府立医科大学, 医学研究科, 客員講師 (80515289)
Project Period (FY) 2011-04-28 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2013: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2012: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2011: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords急性肺傷害 / 気管支鏡下マイクロサンプリング法 / プロテオーム / 肺上皮被覆液 / LCMSMS / ELFICAT / 気管支マイクロサンプリング法 / マススペクトロメトリー / プロテオミクス / 急性呼吸窮迫症候群 / プロテオーム解析 / 急性肺障害 / 肺傷害 / マイクロサンプリング
Outline of Final Research Achievements

We established the new method for the proteomic analysis of the lung epithelial lining fluids. In this study, we harvested the lung epithelial lining fluids by using bronchoscopic micro sampling (BMS), and analyzed them by LC/MS/MS. This method enabled us to efficiently and effectively analyze the micro volume samples, in comparison with classic methods such as bronchoalveolar lavage (BAL). To analyze the proteomic data by web-browser based computer technology, we developed a new analysis software named “Elficat”. Elficat uses various software technologies such as XML-database, and sever-side XSLT and SVG. By using the Elficat, we can visualize the data from multiple groups that contain the data from a set of patients. We can apply this method to the proteomic analysis for acute lung injury such as acute respiratory distress syndrome.

Report

(5 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (23 results)

All 2015 2014 2013 2011 Other

All Journal Article (9 results) (of which Peer Reviewed: 6 results,  Open Access: 5 results,  Acknowledgement Compliant: 3 results) Presentation (11 results) (of which Invited: 8 results) Book (3 results)

  • [Journal Article] 細菌感染と急性肺傷害.2015

    • Author(s)
      佐和貞治.
    • Journal Title

      日薬理誌 Folia Pharmacol Jpn

      Volume: 145 Pages: 112-116

    • NAID

      130004827733

    • Related Report
      2014 Annual Research Report
  • [Journal Article] Association between Pseudomonas aeruginosa type III secretion, antibiotic resistance, and clinical outcome: a review.2014

    • Author(s)
      Sawa T, Shimizu M, Moriyama K, Wiener-Kronish JP.
    • Journal Title

      Crit Care

      Volume: 18 Issue: 6 Pages: 668-668

    • DOI

      10.1186/s13054-014-0668-9

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Anti-PcrV antibody strategies against virulent Pseudomonas aeruginosa.2014

    • Author(s)
      Sawa T, Ito E, Nguyen VH, Haight M.
    • Journal Title

      Hum Vaccin Immunother.

      Volume: 10 Issue: 10 Pages: 2843-2852

    • DOI

      10.4161/21645515.2014.971641

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] V-antigen homologs in pathogenic gram-negative bacteria. Microbiol Immunol.2014

    • Author(s)
      Sawa T, Katoh H, Yasumoto H.
    • Journal Title

      Microbiol Immunol

      Volume: 58 Issue: 5 Pages: 267-285

    • DOI

      10.1111/1348-0421.12147

    • Related Report
      2014 Annual Research Report 2013 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] The molecular mechanism of acute lung injury caused by Pseudomonas aeruginosa: from bacterial pathogenesis to host response.2014

    • Author(s)
      Sawa T.
    • Journal Title

      Journal of Intensive Care

      Volume: 2 Issue: 1 Pages: 10-10

    • DOI

      10.1186/2052-0492-2-10

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] 敗血症に対する免疫調節経腸栄養の効果と多価不飽和脂肪酸生合成の栄養化学.2014

    • Author(s)
      佐和貞治.
    • Journal Title

      日本集中治療医学会誌

      Volume: 21 Pages: 127-129

    • NAID

      130004846844

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] XMLデータベースeXist とCocoon 2 によるServer-Side XSLTを用いたElficat データ解析 –肺上皮被覆液(ELF) プロテオーム解析への応用–2014

    • Author(s)
      佐和貞治、橋本悟,松山広樹,安本寛章,加藤秀哉
    • Journal Title

      麻酔・集中治療とテクノロジー2012

      Volume: 2012 Pages: 72-88

    • Related Report
      2013 Research-status Report
  • [Journal Article] The molecular mechanism of acute lung injury caused by Pseudomonas aeruginosa: from bacterial pathogenesis to host response2014

    • Author(s)
      Sawa T
    • Journal Title

      Journal of Intensive Care

      Volume: 2:10 Pages: 1-11

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] XMLデータベースeXist とCocoon 2 によるServer-Side XSLT を用いたElficat データ解析 –肺上皮被覆液(ELF) プロテオーム解析への応用–2013

    • Author(s)
      佐和貞治,橋本悟,松山広樹,安本寛章,加藤秀哉
    • Journal Title

      麻酔・集中治療とテクノロジー2012

      Volume: 1

    • Related Report
      2012 Research-status Report
  • [Presentation] 生体侵襲と細胞性ストレス応答2015

    • Author(s)
      佐和貞治
    • Organizer
      岡山周術期セミナー
    • Place of Presentation
      岡山
    • Year and Date
      2015-02-21
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 細菌感染とγグロブリン療法.2015

    • Author(s)
      佐和貞治.
    • Organizer
      敗血症forum, 2015
    • Place of Presentation
      東京
    • Year and Date
      2015-02-07
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 細菌性肺炎と急性肺傷害2014

    • Author(s)
      佐和貞治
    • Organizer
      北陸集中治療フォーラム.
    • Place of Presentation
      金沢
    • Year and Date
      2014-10-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 細菌感染症に対する免疫療法.2014

    • Author(s)
      佐和貞治.
    • Organizer
      第29回 日本救命医療学会.
    • Place of Presentation
      八王子
    • Year and Date
      2014-09-20
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] he Molecular pathogenesis of acute lung injury induced by Pseudomonas aeruginosa in intensive care units.2014

    • Author(s)
      Sawa T
    • Organizer
      2014 Annual Meeting of Chinese Association of Anesthesiologist.
    • Place of Presentation
      Shanghai, China
    • Year and Date
      2014-04-19
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 抗体・ガンマグロブリン療法のポテンシャル2014

    • Author(s)
      佐和貞治
    • Organizer
      第48回緑膿菌感染症研究会
    • Place of Presentation
      長崎
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 細菌感染と急性肺傷害2014

    • Author(s)
      佐和貞治
    • Organizer
      第89回日本薬理学会
    • Place of Presentation
      仙台
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 細菌感染と肺傷害2013

    • Author(s)
      佐和貞治
    • Organizer
      近畿バイタルサインセミナー
    • Place of Presentation
      大阪
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 急性肺障害とBMS法2011

    • Author(s)
      佐和貞治
    • Organizer
      日本麻酔科学会第58回学術集会(招待講演)
    • Place of Presentation
      神戸
    • Related Report
      2011 Research-status Report
  • [Presentation] XMLデータベースとサーバーサイドXSL, SVGを用いた肺上皮被覆液プロテオーム解析2011

    • Author(s)
      佐和貞治、橋本悟、松山広樹、安本寛章、加藤秀哉
    • Organizer
      第29回日本麻酔・集中治療テクノロジー学会
    • Place of Presentation
      名古屋
    • Related Report
      2011 Research-status Report
  • [Presentation] 気管支鏡下マイクロサンプリング法を用いた肺上皮被覆液のタンパク解析.

    • Author(s)
      佐和貞治
    • Organizer
      日本麻酔科学会第59回学術集会.
    • Place of Presentation
      神戸
    • Related Report
      2012 Research-status Report
  • [Book] text麻酔・蘇生学. 第6章 外科的侵襲に対する生体反応改訂4版.2014

    • Author(s)
      佐和貞治
    • Total Pages
      5
    • Publisher
      南山堂
    • Related Report
      2014 Annual Research Report
  • [Book] 感染症. よくある術前合併症. 研修ノートシリーズ 麻酔科研修ノート2014

    • Author(s)
      佐和貞治.
    • Total Pages
      4
    • Publisher
      診断と治療社
    • Related Report
      2014 Annual Research Report
  • [Book] TEXT麻酔・蘇生学 第6章外科的信州に対する生体反応.2013

    • Author(s)
      佐和貞治
    • Total Pages
      14
    • Publisher
      南山堂
    • Related Report
      2013 Research-status Report

URL: 

Published: 2011-08-05   Modified: 2019-07-29  

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