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Theoretical construction and application of fine-grained cycle sharing technique for GPU grid

Research Project

Project/Area Number 23700057
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Computer system/Network
Research InstitutionOsaka University

Principal Investigator

INO Fumihiko  大阪大学, 情報科学研究科, 准教授 (90346172)

Project Period (FY) 2011 – 2013
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2013: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2012: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords高性能計算 / GPGPU / マルチタスク / グリッド計算 / GPGPU
Research Abstract

We developed a fine-grained cycle sharing technique for computational grid systems, which share computational resources on the network. Our technique is based on a multitasking mechanism for graphics processing units (GPUs). We applied our technique to a bioinformatics problem, called homology search, and demonstrated that scientific applications can be accelerated while editing electronic documents. We also constructed an idle cycle model for GPUs and developed a method that selects computational resources according to the distribution of idle period lengths.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (31 results)

All 2014 2013 2012 2011 Other

All Journal Article (12 results) (of which Peer Reviewed: 11 results) Presentation (18 results) Remarks (1 results)

  • [Journal Article] A Fine Grained Cycle Sharing System with Cooperative Multitasking on GPUs2014

    • Author(s)
      Fumihiko Ino, Yosuke Oka, Kenichi Hagihara
    • Journal Title

      International Journal of Networking and Computing

      Volume: (印刷中)

    • NAID

      130004709086

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Efficient Acceleration of Mutual Information Computation for Nonrigid Registration Using CUDA2014

    • Author(s)
      Kei Ikeda, Fumihiko Ino, Kenichi Hagihara
    • Journal Title

      IEEE Journal of Biomedical and Health Informatics

      Volume: Vol. 18, No. 3 Issue: 3 Pages: 956-968

    • DOI

      10.1109/jbhi.2014.2310745

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Improving Cache Locality for GPU-based Volume Rendering2014

    • Author(s)
      Yuki Sugimoto, Fumihiko Ino, Kenichi Hagihara
    • Journal Title

      Parallel Computing

      Volume: Vol.40, No.5/6 Issue: 5-6 Pages: 59-69

    • DOI

      10.1016/j.parco.2014.03.013

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A Parallel Scheme for Accelerating Parameter Sweep Applications on a GPU2014

    • Author(s)
      Fumihiko Ino, Kentaro Shigeoka, Tomohiro Okuyama, Masaya Motokubota, Kenichi Hagihara
    • Journal Title

      Concurrency and Computation : Practice and Experience

      Volume: Vol. 26, No. 2 Issue: 2 Pages: 516-531

    • DOI

      10.1002/cpe.3016

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] GPU-Chariot: A Programming Framework for Stream Applications Running on Multi-GPU Systems2013

    • Author(s)
      Fumihiko Ino, Shinta Nakagawa, Kenichi Hagihara
    • Journal Title

      IEICE Transactions on Information and Systems

      Volume: E96.D Issue: 12 Pages: 2604-2616

    • DOI

      10.1587/transinf.E96.D.2604

    • NAID

      130003385429

    • ISSN
      0916-8532, 1745-1361
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] The GPU Accelerator and Its Research Trends2013

    • Author(s)
      伊野文彦, 萩原兼一
    • Journal Title

      Medical Imaging Technology

      Volume: 31 Issue: 3 Pages: 147-152

    • DOI

      10.11409/mit.31.147

    • NAID

      130003374507

    • ISSN
      0288-450X, 2185-3193
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Journal Article] Sequence Homology Search Using Fine Grained Cycle Sharing of Idle GPUs2012

    • Author(s)
      Fumihiko Ino, Yuma Munekawa, Kenichi Hagihara
    • Journal Title

      IEEE Trans. Parallel and Distributed Systems

      Volume: Vol. 23, No. 4 Issue: 4 Pages: 751-759

    • DOI

      10.1109/tpds.2011.239

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] A Task Parallel Algorithm for Finding All-Pairs Shortest Paths Using the GPU2012

    • Author(s)
      Tomohiro Okuyama, Fumihiko Ino, Kenichi Hagihara
    • Journal Title

      International Journal of High Performance Computing and Networking

      Volume: Vol. 7, No. 2 Issue: 2 Pages: 87-98

    • DOI

      10.1504/ijhpcn.2012.046384

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Cooperative Multitasking for GPU-Accelerated Grid Systems2012

    • Author(s)
      Fumihiko Ino, Akihiro Ogita, Kentaro Oita, Kenichi Hagihara
    • Journal Title

      Concurrency and Computation : Practice and Experience

      Volume: Vol. 24, No. 1 Issue: 1 Pages: 96-107

    • DOI

      10.1002/cpe.1722

    • Related Report
      2013 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Sequence Homology Search using Fine-Grained Cycle Sharing of Idle GPUs2012

    • Author(s)
      Fumihiko Ino, Yuma Munekawa, and Kenichi Hagihara
    • Journal Title

      IEEE Transactions on Parallel and Distributed Systems

      Volume: 23

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] GPUによる高速な全変動最小化2011

    • Author(s)
      松田俊広, 伊野文彦, 萩原兼一
    • Journal Title

      電子情報通信学会論文誌

      Volume: J94-D Pages: 852-861

    • NAID

      110008661380

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] 手書き文字認識向けニューラルネットワークモデルのGPUによる高速化2011

    • Author(s)
      池田孝利, 宮本弘之, 伊野文彦, 萩原兼一
    • Journal Title

      情報処理学会論文誌:コンピューティングシステム

      Volume: 4 Pages: 88-99

    • NAID

      40019600011

    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] GPU において動的グラフを高速処理するためのフレームワークの検討2014

    • Author(s)
      三谷康晃, 伊野文彦, 萩原兼一
    • Organizer
      第14回ハイパフォーマンスコンピューティングと計算科学シンポジウム
    • Place of Presentation
      一橋大学一橋講堂(東京都)
    • Related Report
      2013 Final Research Report
  • [Presentation] GPUにおいて動的グラフを高速処理するためのフレームワークの検討2014

    • Author(s)
      三谷康晃, 伊野文彦, 萩原兼一
    • Organizer
      第14回ハイパフォーマンスコンピューティングと計算科学シンポジウム
    • Place of Presentation
      一橋大学一橋講堂(東京都)
    • Related Report
      2013 Annual Research Report
  • [Presentation] The Past, Present, and Future of GPU-Accelerated Grid Computing2013

    • Author(s)
      Fumihiko Ino
    • Organizer
      1st International Symposium on Computing and Networking (CANDAR 2013)
    • Place of Presentation
      Matsuyama, Japan
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] GPU を用いた分枝限定法におけるメモリ参照効率を高めるための配列パッキング手法2013

    • Author(s)
      重岡謙太朗, 伊野文彦, 萩原兼一
    • Organizer
      情報処理学会ハイパフォーマンスコンピューティング研究会
    • Place of Presentation
      沖縄産業支援センター(沖縄市)
    • Related Report
      2013 Final Research Report
  • [Presentation] GPU サイクル共有システムのための遊休時間予測手法の比較2013

    • Author(s)
      南翔太, 伊野文彦, 萩原兼一
    • Organizer
      第12回情報科学技術フォーラム
    • Place of Presentation
      鳥取大学(鳥取市)
    • Related Report
      2013 Final Research Report
  • [Presentation] Fine-Grained Cycle Sharing of Idle GPUs for Homology Search2013

    • Author(s)
      Fumihiko Ino, Kenichi Hagihara
    • Organizer
      4th GPU Technology Conference (GTC 2013)
    • Place of Presentation
      San Jose, CA, USA
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] 協調マルチタスキングを用いて短い遊休時間を活用するGPU グリッドシステムの提案2013

    • Author(s)
      岡陽介, 伊野文彦, 萩原兼一
    • Organizer
      情報処理学会ハイパフォーマンスコンピューティング研究会
    • Place of Presentation
      清風荘(あわら市)
    • Related Report
      2013 Final Research Report
  • [Presentation] GPUを用いた分枝限定法におけるメモリ参照効率を高めるための配列パッキング手法2013

    • Author(s)
      重岡謙太朗, 伊野文彦, 萩原兼一
    • Organizer
      情報処理学会ハイパフォーマンスコンピューティング研究会
    • Place of Presentation
      沖縄産業支援センター(沖縄県)
    • Related Report
      2013 Annual Research Report
  • [Presentation] GPUサイクル共有システムのための遊休時間予測手法の比較2013

    • Author(s)
      南翔太, 伊野文彦, 萩原兼一
    • Organizer
      第12回情報科学技術フォーラム
    • Place of Presentation
      鳥取大学鳥取キャンパス(鳥取県)
    • Related Report
      2013 Annual Research Report
  • [Presentation] CUDAにおける離散ウェーブレット変換のIn-place処理のためのデータ並べ替え手法2013

    • Author(s)
      生澤拓也, 伊野文彦, 萩原兼一
    • Organizer
      平成25年度情報処理学会関西支部支部大会
    • Place of Presentation
      大阪大学中之島センター(大阪府)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 協調マルチタスキングを用いて短い遊休時間を活用するGPUグリッドシステムの提案2013

    • Author(s)
      岡陽介, 伊野文彦, 萩原兼一
    • Organizer
      情報処理学会ハイパフォーマンスコンピューティング研究会
    • Place of Presentation
      清風荘(あわら市)
    • Related Report
      2012 Research-status Report
  • [Presentation] Acceleration of Variance of Color Differences-Based Demosaicing Using CUDA2012

    • Author(s)
      Muhammad Ismail Faruqi, Fumihiko Ino, and Kenichi Hagihara
    • Organizer
      10th International Conference on High Performance Computing and Simulation (HPCS 2012)
    • Place of Presentation
      Madrid, Spain
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] Accelerating Mutual Information Computation for Nonrigid Registration the GPU2012

    • Author(s)
      Kei Ikeda, Fumihiko Ino, and Kenichi Hagihara
    • Organizer
      3rd GPU Technology Conference (GTC 2012)
    • Place of Presentation
      San Jose, CA, USA
    • Related Report
      2012 Research-status Report
  • [Presentation] Accelerating Joint Histogram Computation for Image Registration on the GPU2012

    • Author(s)
      Kei Ikeda, Fumihiko Ino, and Kenichi Hagihara
    • Organizer
      Computer Assisted Radiology and Surgery: 26th International Congress and Exhibition (CARS 2012)
    • Place of Presentation
      Pisa, Italy
    • Related Report
      2012 Research-status Report
  • [Presentation] 遊休GPU を用いて科学計算を高速化するGPU グリッドについて2011

    • Author(s)
      伊野文彦
    • Organizer
      平成23年度情報処理学会関西支部支部大会
    • Place of Presentation
      大阪大学(大阪府)
    • Year and Date
      2011-09-22
    • Related Report
      2013 Final Research Report
  • [Presentation] GPU 向けマルチタスキングにおけるオーバヘッド削減の検討2011

    • Author(s)
      岡陽介, 伊野文彦, 萩原兼一
    • Organizer
      第9回先進的計算基盤システムシンポジウム
    • URL

      http://www-hagi.ist.osaka-u.ac.jp/~ino/

    • Place of Presentation
      秋葉原コンベンションホール(東京都)
    • Year and Date
      2011-05-26
    • Related Report
      2013 Final Research Report
  • [Presentation] 遊休GPUを用いて科学計算を高速化するGPUグリッドについて2011

    • Author(s)
      伊野文彦
    • Organizer
      平成23年度情報処理学会関西支部支部大会(招待講演)
    • Place of Presentation
      大阪府
    • Related Report
      2011 Research-status Report
  • [Presentation] GPU向けマルチタスキングにおけるオーバヘッド削減の検討2011

    • Author(s)
      岡陽介
    • Organizer
      第9回先進的計算基盤システムシンポジウム(SACSIS 2011)
    • Place of Presentation
      東京都
    • Related Report
      2011 Research-status Report
  • [Remarks] 萩原研究室ホームページ

    • URL

      http://www-hagi.ist.osaka-u.ac.jp/

    • Related Report
      2013 Annual Research Report

URL: 

Published: 2011-08-05   Modified: 2019-07-29  

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