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Construction and evaluation of DNA marker for the analysis of plantremains

Research Project

Project/Area Number 23701015
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Cultural property science
Research InstitutionHirosaki University

Principal Investigator

TANAKA Katsunori  弘前大学, 人文学部, 特任助教 (00450213)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2012: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2011: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
KeywordsDNAマーカー / 遺伝的多様性 / 育種学 / 考古学 / メロン / 植物遺存体 / 種子 / ウリ
Research Abstract

Plant remains excavated at archeological site is an important information source to concern about diet and taste for food of ancient people and social background of their establishment. Especially, melon seed remains is useful for research after archeological excavation, because of their well preservation. Thus, morphological and DNA analysis is effective method for archeological research. In this research, to construct DNA marker for the analysis of melon seed remains, I conducted following three basic studies; i) sequencing of chloroplast and nuclear genome in melon to detect sequence polymorphism, ii) development of DNA marker after the analysis of sequence polymorphism in modern cultivated melon, iii) test of DNA marker to melon seed remains excavated Shikata archeological site, Okayama Prefecture. By these research, 17 DNA marker for melon seed remains (chloroplast genome: 9, nuclear genome: 8) was constructed and polyphyletic origin of cultivated melon was proposed. And, the research results suggested that two cytoplasm type melons were used in Shikata archeological site and after the 11the century, modern Japanese endemic melon, Group Conomon vars. makuwa and conomon, may be established in the process of selection.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (12 results)

All 2013 2012 2011 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (10 results) (of which Invited: 1 results)

  • [Journal Article] Diversification and genetic differentiation of cultivated melon inferred from sequence polymorphism in the chloroplast genome2013

    • Author(s)
      田中克典、明石由香利、加藤鎌司
    • Journal Title

      Breeding Science

      Volume: (印刷中)

    • NAID

      10031173710

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Diversification and genetic differentiation of cultivated melon inferred from sequence polymorphism in the chloroplast genome2013

    • Author(s)
      田中 克典
    • Journal Title

      Breeding Science

      Volume: 印刷中

    • NAID

      10031173710

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] メロンの起源地を追い求めて、講演会世界に植物遺伝子資源を求めてメロン,マメ,お茶2012

    • Author(s)
      田中克典
    • Organizer
      ツバキ…有用植物を探る旅
    • Place of Presentation
      富山県中央植物園サンライトホール(富山県)(招待講演)
    • Year and Date
      2012-10-14
    • Related Report
      2012 Final Research Report
  • [Presentation] 岡山県鹿田遺跡から出土したメロン仲間の種子遺存体における形態学的分析とDNA分析2012

    • Author(s)
      田中克典、山本悦世、加藤鎌司
    • Organizer
      日本文化財科学会第29回大会
    • Place of Presentation
      京都大学(京都府)
    • Year and Date
      2012-06-23
    • Related Report
      2012 Final Research Report
  • [Presentation] The transition of agricultural crops in East Asia based on morphological and DNA analysis2012

    • Author(s)
      田中克典
    • Organizer
      第5回東アジア考古学協会世界大会
    • Place of Presentation
      西南学院大学西南コミュニティセンター(福岡県)
    • Year and Date
      2012-06-09
    • Related Report
      2012 Final Research Report
  • [Presentation] Chloroplast genome inferred the differentiation of maternal line in cultivated melon and its origin2011

    • Author(s)
      田中克典
    • Organizer
      第2回ウリ科・第8回ナス科国際合同シンポジウム
    • Place of Presentation
      神戸コンベンションセンター(兵庫県)(招待講演)
    • Related Report
      2012 Final Research Report
  • [Presentation] 葉緑体ゲノムが示す栽培メロンにおける母系の分化と起源2011

    • Author(s)
      田中克典
    • Organizer
      第2回ウリ科・第8回ナス科国際合同シンポジウム(招待講演)
    • Place of Presentation
      神戸コンベンションセンター
    • Related Report
      2011 Research-status Report
  • [Presentation] The transition of agricultural crops in East Asia based on morphological and DNA analysis

    • Author(s)
      田中 克典
    • Organizer
      第5回東アジア考古学協会世界大会
    • Place of Presentation
      西南学院大学 西南コミュニティセンター(福岡県)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 岡山県鹿田遺跡から出土したメロン仲間の種子遺存体における形態学的分析とDNA分析

    • Author(s)
      田中 克典
    • Organizer
      日本文化財科学会第29回大会
    • Place of Presentation
      京都大学(京都府)
    • Related Report
      2012 Annual Research Report
  • [Presentation] メロンの起源地を追い求めて

    • Author(s)
      田中 克典
    • Organizer
      講演会 世界に植物遺伝子資源を求めて メロン、マメ、お茶、ツバキ…有用植物を探る旅
    • Place of Presentation
      富山県中央植物園 サンライトホール(富山県)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Selection of cultivated melon under social and agricultural development around the Shikata area in Okayama Prefecture

    • Author(s)
      田中 克典
    • Organizer
      国際古民族植物学会
    • Place of Presentation
      アリストテレス大学(ギリシャ)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 岡山県鹿田遺跡における種子遺存体の形態分析およびDNA分析が示すメロン仲間の選抜

    • Author(s)
      田中 克典
    • Organizer
      日本文化財科学会第30回大会
    • Place of Presentation
      弘前大学(青森県)
    • Related Report
      2012 Annual Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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